Factsheet for PGSC0003DMT400070488

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400022864
PGSC0003DMT400023896
PGSC0003DMT400036790
PGSC0003DMT400054512
PGSC0003DMT400069203
PGSC0003DMT400072364
PGSC0003DMT400074101
PGSC0003DMT400078676

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G60340.1	PGSC0003DMT400023896	AT1G22920.1	21798944
AT5G60340.1	PGSC0003DMT400069203	AT1G22920.1	21798944
AT5G60340.1	PGSC0003DMT400078676	AT2G22680.1	21798944
AT5G60340.1	PGSC0003DMT400022864	AT2G36160.1	23121860
AT5G60340.1	PGSC0003DMT400054512	AT2G36160.1	23121860
AT5G60340.1	PGSC0003DMT400072364	AT2G36160.1	23121860
AT5G60340.1	PGSC0003DMT400036790	AT3G17860.1	21798944
AT5G60340.1	PGSC0003DMT400074101	AT3G17860.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g072410.1.1	Tomato	mitochondrion	97.74	97.74
VIT_06s0004g03280.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	79.1	80.0
KRH70217	Soybean	nucleus	71.19	70.39
GSMUA_Achr8P34050_001	Banana	mitochondrion	70.06	70.06
KRH08572	Soybean	nucleus	70.62	69.83
Bra002487.1-P	Field mustard	cytosol	70.06	69.66
TraesCSU01G123400.1	Wheat	mitochondrion	69.49	69.1
TraesCS6A01G074100.1	Wheat	mitochondrion	69.49	69.1
TraesCSU01G086500.1	Wheat	mitochondrion, plastid	68.36	67.98
Os07t0412400-01	Rice	mitochondrion	68.93	67.78
Zm00001d019481_P001	Maize	mitochondrion	68.36	67.6
CDX71036	Canola	cytosol	67.23	67.23
CDX88754	Canola	cytosol, mitochondrion, nucleus, plastid	66.1	66.1
Bra006665.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	66.1	66.1
PGSC0003DMT400019370	Potato	mitochondrion	67.23	65.03
KRH34487	Soybean	cytosol	46.89	64.84
AT5G60340.1	Thale cress	mitochondrion	62.15	61.8
PGSC0003DMT400021286	Potato	mitochondrion	23.73	60.0
KRG92307	Soybean	cytosol	37.85	53.17
OQU88892	Sorghum	plastid	70.06	52.54
PGSC0003DMT400089563	Potato	cytosol	26.55	50.0
PGSC0003DMT400085557	Potato	cytosol, mitochondrion	27.12	45.71
HORVU6Hr1G013200.1	Barley	mitochondrion	70.06	41.61
CDX80174	Canola	plastid	69.49	29.64
CDY31552	Canola	plastid	68.93	29.54
PGSC0003DMT400013687	Potato	cytosol	16.95	24.19

Protein Annotations

KEGG:00230+2.7.4.3	KEGG:00730+2.7.4.3	EntrezGene:102604903	MapMan:17.1.3.2.1.16	Gene3D:3.40.50.300	InterPro:Adenyl_kinase_AK6
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004017	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0016787	GO:GO:0016887	GO:GO:0046939	GO:GO:0046940	UniProt:M1CMA1	HAMAP:MF_00039
InterPro:P-loop_NTPase	PFAM:PF13238	EnsemblPlantsGene:PGSC0003DMG400027404	PGSC:PGSC0003DMG400027404	EnsemblPlants:PGSC0003DMT400070488	PANTHER:PTHR12595
PANTHER:PTHR12595:SF0	SUPFAM:SSF52540	UniParc:UPI0002959F98	RefSeq:XP_006340398.1	SEG:seg	:

Description

Adenylate kinase isoenzyme 6 [Source:PGSC_GENE;Acc:PGSC0003DMG400027404]

Coordinates

chr11:+:44007791..44010668

Molecular Weight (calculated)

20076.6 Da

IEP (calculated)

4.390

GRAVY (calculated)

-0.424

Length

177 amino acids

Sequence
(BLAST)

001: MAHNSSSRRR PNILITGTPG TGKTTTSSAL AEATQLRHIN IGELVKEKKL HDGWDDTLDC YIINEDLVCD ELEDMMEAGG NIVDHHGCDF FPERWFDRVV
101: VLQTDNTVLY DRLSRRGYTG QKLTNNIECE IFQILLEEAK DSYPEDIVVA LRSDSVDDIS KNVEMMSNWI GSWNPVV

Best Arabidopsis Sequence Match ( AT5G60340.1 )
(BLAST)

001: MARRNRGVTR RERPNLLITG TPGTGKSTTA SALAEATNLR YICIGDLVKE KEFYHGWDNE LECHFINEDS VIDELDDAMI EGGNIVDYHG CDFFPQRWFD
101: RVVVLRTENS VLYDRLTNRG YSGTKLSNNL QCEMYQVLLE EAHDSYDEEI VTELQSNTIE DISNNVSTLT DWINAWQP

Arabidopsis Description

AAK6Adenylate kinase isoenzyme 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9FJI1]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.