CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 2
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG96881
KRG96883
KRH11201
KRH21050
KRH39044
KRH39527
KRH45468
KRH45469
KRH52586
KRH61926
KRH68609
KRH68612
KRH74431
KRH75634

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G60340.1	KRH52586	AT1G22920.1	21798944
AT5G60340.1	KRH61926	AT1G22920.1	21798944
AT5G60340.1	KRH39527	AT2G22680.1	21798944
AT5G60340.1	KRH45468	AT2G22680.1	21798944
AT5G60340.1	KRH45469	AT2G22680.1	21798944
AT5G60340.1	KRH74431	AT2G22680.1	21798944
AT5G60340.1	KRH75634	AT2G22680.1	21798944
AT5G60340.1	KRG96881	AT2G36160.1	23121860
AT5G60340.1	KRG96883	AT2G36160.1	23121860
AT5G60340.1	KRH11201	AT2G36160.1	23121860
AT5G60340.1	KRH21050	AT2G36160.1	23121860
AT5G60340.1	KRH68609	AT2G36160.1	23121860
AT5G60340.1	KRH68612	AT2G36160.1	23121860
AT5G60340.1	KRH39044	AT3G17860.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH70217	Soybean	nucleus	95.53	95.53
KRH34487	Soybean	cytosol	64.25	89.84
VIT_06s0004g03280.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	76.54	78.29
KRG92307	Soybean	cytosol	53.63	76.19
GSMUA_Achr8P34050_001	Banana	mitochondrion	71.51	72.32
Solyc11g072410.1.1	Tomato	mitochondrion	70.95	71.75
PGSC0003DMT400070488	Potato	mitochondrion	69.83	70.62
Bra006665.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	67.04	67.8
CDX71036	Canola	cytosol	67.04	67.8
CDX88754	Canola	cytosol, mitochondrion, nucleus, plastid	67.04	67.8
Zm00001d019481_P001	Maize	mitochondrion	67.6	67.6
Os07t0412400-01	Rice	mitochondrion	67.6	67.22
TraesCS6A01G074100.1	Wheat	mitochondrion	65.36	65.73
TraesCSU01G123400.1	Wheat	mitochondrion	65.36	65.73
TraesCSU01G086500.1	Wheat	mitochondrion, plastid	64.8	65.17
Bra002487.1-P	Field mustard	cytosol	64.8	65.17
PGSC0003DMT400019370	Potato	mitochondrion	60.89	59.56
AT5G60340.1	Thale cress	mitochondrion	58.66	58.99
Solyc06g075310.2.1	Tomato	cytosol	43.02	57.89
PGSC0003DMT400021286	Potato	mitochondrion	20.67	52.86
OQU88892	Sorghum	plastid	68.16	51.69
PGSC0003DMT400089563	Potato	cytosol	24.02	45.74
PGSC0003DMT400085557	Potato	cytosol, mitochondrion	23.46	40.0
HORVU6Hr1G013200.1	Barley	mitochondrion	64.25	38.59
CDX80174	Canola	plastid	64.8	27.95
CDY31552	Canola	plastid	63.69	27.6
PGSC0003DMT400013687	Potato	cytosol	15.08	21.77

Protein Annotations

KEGG:00230+2.7.4.3	KEGG:00730+2.7.4.3	EntrezGene:100306226	MapMan:17.1.3.2.1.16	Gene3D:3.40.50.300	EMBL:ACUP02010183
InterPro:Adenyl_kinase_AK6	EMBL:BT090238	UniProt:C6SYJ0	EnsemblPlantsGene:GLYMA_16G158000	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004017	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0016787
GO:GO:0016887	GO:GO:0046939	GO:GO:0046940	EnsemblPlants:KRH08572	ProteinID:KRH08572	ProteinID:KRH08572.1
ProteinID:KRH08573.1	HAMAP:MF_00039	InterPro:P-loop_NTPase	PFAM:PF13238	PANTHER:PTHR12595	PANTHER:PTHR12595:SF0
MetaCyc:PWY-7219	SUPFAM:SSF52540	UniParc:UPI0001B1586E	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr16:+:31843496..31846596

Molecular Weight (calculated)

20408.9 Da

IEP (calculated)

4.249

GRAVY (calculated)

-0.475

Length

179 amino acids

Sequence
(BLAST)

001: MVQENGKRKK PNILVTGTPG TGKTTVCTAL AEATQLCHIN VGELVKEKNL HDGWDDELDC YLLNEDLVCD ELEDVMEEGG NIVDYHGCDF FPERWFDCVV
101: VLQTDNTILY DRLSRRGYKD SKLSNNIECE IFQVLLEEAK ESYSEEKVIA MKSDNIEDVS RNVATLTDWV RNWSLPSHS

Best Arabidopsis Sequence Match ( AT5G60340.1 )
(BLAST)

001: MARRNRGVTR RERPNLLITG TPGTGKSTTA SALAEATNLR YICIGDLVKE KEFYHGWDNE LECHFINEDS VIDELDDAMI EGGNIVDYHG CDFFPQRWFD
101: RVVVLRTENS VLYDRLTNRG YSGTKLSNNL QCEMYQVLLE EAHDSYDEEI VTELQSNTIE DISNNVSTLT DWINAWQP

Arabidopsis Description

AAK6Adenylate kinase isoenzyme 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9FJI1]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.