CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG96881	Soybean	cytosol	90.36	100.0
KRG96883	Soybean	endoplasmic reticulum, nucleus	90.36	100.0
KRH21050	Soybean	cytosol	90.36	100.0
KRH68612	Soybean	cytosol	90.36	100.0
KRH11201	Soybean	nucleus	89.76	99.33
EER88707	Sorghum	cytosol	84.34	93.33
EER88715	Sorghum	cytosol	84.34	93.33
EES12290	Sorghum	cytosol	84.34	93.33
TraesCS6D01G126300.1	Wheat	cytosol	84.34	93.33
Bra005296.1-P	Field mustard	cytosol	84.34	93.33
Bra009165.1-P	Field mustard	cytosol	84.34	93.33
Bra023052.1-P	Field mustard	cytosol	84.34	93.33
TraesCS6A01G137300.1	Wheat	cytosol	84.34	93.33
TraesCS7B01G355300.1	Wheat	cytosol, golgi, nucleus, plastid, unclear	84.34	92.72
HORVU7Hr1G104220.3	Barley	cytosol, plasma membrane	84.34	92.72
Os02t0162500-01	Rice	nucleus, plasma membrane	83.73	92.67
Bra034833.1-P	Field mustard	cytosol	83.73	92.67
Bra001406.1-P	Field mustard	cytosol	83.13	92.0
TraesCS6B01G165600.1	Wheat	cytosol	83.73	91.45
CDX84577	Canola	cytosol	83.73	90.85
CDX84154	Canola	cytosol	83.73	90.85
AT3G52580.1	Thale cress	cytosol	81.93	90.67
AT3G11510.1	Thale cress	cytosol	81.33	90.0
AT2G36160.1	Thale cress	cytosol	80.72	89.33
CDX75067	Canola	cytosol	83.73	88.53
VIT_08s0007g03020.t01	Wine grape	cytosol	86.14	87.73
CDY08517	Canola	cytosol	83.73	86.88
CDX98905	Canola	cytosol	83.73	86.88
Bra002045.1-P	Field mustard	cytosol	83.13	85.19
CDY60438	Canola	cytosol	84.34	84.34
CDY01031	Canola	cytosol	84.34	83.83
Zm00001d036568_P001	Maize	cytosol, mitochondrion	83.73	81.29
CDX73621	Canola	cytosol	83.73	80.81
CDY26067	Canola	cytosol	84.34	80.0
Zm00001d046583_P001	Maize	endoplasmic reticulum	84.34	77.78
CDY71084	Canola	cytosol	45.78	76.77
Zm00001d014462_P002	Maize	cytosol	68.67	71.25
KXG20642	Sorghum	cytosol	66.87	69.81
CDX73872	Canola	cytosol	84.34	66.04
CDY00737	Canola	cytosol	84.34	66.04
Zm00001d052553_P001	Maize	cytosol	43.37	64.29
CDY71908	Canola	plastid	83.73	64.06
Zm00001d036565_P002	Maize	cytosol	76.51	61.65
Zm00001d000104_P001	Maize	cytosol	39.76	58.93
Zm00001d036567_P002	Maize	cytosol	75.3	57.87
CDY43745	Canola	cytosol, plasma membrane	83.73	56.73
HORVU6Hr1G085630.1	Barley	cytosol, nucleus	13.86	54.76
HORVU1Hr1G076240.1	Barley	endoplasmic reticulum, extracellular, vacuole	18.67	44.29
HORVU1Hr1G058980.1	Barley	cytosol	18.67	40.79
HORVU7Hr1G091030.1	Barley	cytosol	18.07	39.47
HORVU6Hr1G026350.1	Barley	cytosol	22.89	33.33

Protein Annotations

EntrezGene:100499665	EntrezGene:100780604	EntrezGene:100785807	EntrezGene:100786325	EntrezGene:100787077	MapMan:17.1.3.1.15
Gene3D:3.30.420.80	UniProt:A0A0R0KP31	EMBL:ACUP02002121	EnsemblPlantsGene:GLYMA_03G241100	GO:GO:0003674	GO:GO:0003735
GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840
GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538
GO:GO:0030529	InterPro:IPR036967	EnsemblPlants:KRH68609	ProteinID:KRH68609	ProteinID:KRH68609.1	HAMAP:MF_01310
PFAM:PF00411	PIRSF:PIRSF002131	ScanProsite:PS00054	PANTHER:PTHR11759	PANTHER:PTHR11759:SF11	InterPro:Ribosomal_S11
InterPro:Ribosomal_S11_CS	InterPro:Ribosomal_S11_sf	SUPFAM:SSF53137	UniParc:UPI0006EE0244	SEG:seg	:

Description

hypothetical protein

Coordinates

chr3:+:43952634..43954811

Molecular Weight (calculated)

18222.0 Da

IEP (calculated)

11.072

GRAVY (calculated)

-0.369

Length

166 amino acids

Sequence
(BLAST)

001: MSRRKVREPK EENVTLGPAV RDGEHVFGVA RIFASFNDTF IHVTDLSGRE TLVRITGGMK VKADRDESSP YAAMLAAQDV AARCKYHWSI VLISCFSDFV
101: QELGITALHI KLRATGGNKT KTPGPGAQSA LRALARSGMK IGRIEDVTPI PSDSTRRKSG RRGRRL

Best Arabidopsis Sequence Match ( AT2G36160.1 )
(BLAST)

001: MSKRKTKEPK VDVVTLGPSV REGEQVFGVV HIFASFNDTF IHVTDLSGRE TLVRITGGMK VKADRDESSP YAAMLAAQDV AQRCKELGIT AMHVKLRATG
101: GNKTKTPGPG AQSALRALAR SGMKIGRIED VTPIPTDSTR RKGGRRGRRL

Arabidopsis Description

RPS14A40S ribosomal protein S14-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIH0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.