Factsheet for Bra002045.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 5
plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra005296.1-P	Field mustard	cytosol	91.36	98.67
Bra009165.1-P	Field mustard	cytosol	91.36	98.67
Bra023052.1-P	Field mustard	cytosol	91.36	98.67
Bra034833.1-P	Field mustard	cytosol	91.36	98.67
Bra001406.1-P	Field mustard	cytosol	89.51	96.67
AT3G11510.1	Thale cress	cytosol	88.27	95.33
EER88707	Sorghum	cytosol	87.04	94.0
EER88715	Sorghum	cytosol	87.04	94.0
EES12290	Sorghum	cytosol	87.04	94.0
Os02t0162500-01	Rice	nucleus, plasma membrane	86.42	93.33
TraesCS7B01G355300.1	Wheat	cytosol, golgi, nucleus, plastid, unclear	86.42	92.72
HORVU7Hr1G104220.3	Barley	cytosol, plasma membrane	86.42	92.72
TraesCS6D01G126300.1	Wheat	cytosol	85.8	92.67
TraesCS6A01G137300.1	Wheat	cytosol	85.8	92.67
Solyc10g083280.1.1	Tomato	extracellular, nucleus	85.8	92.67
Solyc09g010100.2.1	Tomato	cytosol	85.8	92.67
PGSC0003DMT400072364	Potato	cytosol	85.19	92.0
PGSC0003DMT400022864	Potato	cytosol	85.19	92.0
KRH68612	Soybean	cytosol	85.19	92.0
KRG96883	Soybean	endoplasmic reticulum, nucleus	85.19	92.0
KRG96881	Soybean	cytosol	85.19	92.0
KRH21050	Soybean	cytosol	85.19	92.0
TraesCS6B01G165600.1	Wheat	cytosol	85.8	91.45
KRH11201	Soybean	nucleus	84.57	91.33
PGSC0003DMT400054512	Potato	cytosol	84.57	91.33
Solyc02g070570.2.1	Tomato	nucleus	84.57	91.33
VIT_08s0007g03020.t01	Wine grape	cytosol	85.8	85.28
KRH68609	Soybean	cytosol	85.19	83.13
Zm00001d036568_P001	Maize	cytosol, mitochondrion	87.65	83.04
Zm00001d046583_P001	Maize	endoplasmic reticulum	88.27	79.44
Zm00001d014462_P002	Maize	cytosol	70.99	71.88
KXG20642	Sorghum	cytosol	67.9	69.18
CDY71908	Canola	plastid	92.59	69.12
Zm00001d052553_P001	Maize	cytosol	43.83	63.39
Zm00001d036565_P002	Maize	cytosol	78.4	61.65
Zm00001d000104_P001	Maize	cytosol	40.12	58.04
Zm00001d036567_P002	Maize	cytosol	77.16	57.87
HORVU6Hr1G085630.1	Barley	cytosol, nucleus	13.58	52.38
HORVU1Hr1G076240.1	Barley	endoplasmic reticulum, extracellular, vacuole	18.52	42.86
HORVU1Hr1G058980.1	Barley	cytosol	19.14	40.79
HORVU7Hr1G091030.1	Barley	cytosol	18.52	39.47
HORVU6Hr1G026350.1	Barley	cytosol	22.84	32.46

Protein Annotations

MapMan:17.1.3.1.15	Gene3D:3.30.420.80	EnsemblPlantsGene:Bra002045	EnsemblPlants:Bra002045.1	EnsemblPlants:Bra002045.1-P	GO:GO:0003674
GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0019538	GO:GO:0030529	InterPro:IPR036967	UniProt:M4CCW4	HAMAP:MF_01310	PFAM:PF00411
PIRSF:PIRSF002131	ScanProsite:PS00054	PANTHER:PTHR11759	PANTHER:PTHR11759:SF11	InterPro:Ribosomal_S11	InterPro:Ribosomal_S11_CS
InterPro:Ribosomal_S11_sf	SUPFAM:SSF53137	UniParc:UPI0002543EF2	SEG:seg	:	:

Description

AT3G11510 (E=2e-062) | 40S ribosomal protein S14 (RPS14B)

Coordinates

chrA10:+:11948861..11950133

Molecular Weight (calculated)

17752.5 Da

IEP (calculated)

11.378

GRAVY (calculated)

-0.555

Length

162 amino acids

Sequence
(BLAST)

001: METTMYSRVK ALRSRRKTRE PKEETVTLGP AVRDGEQVFG VVHIFASFND TFIHVTDLSG RETLVRITGG MKVKADRDES SPYAAMLAAQ DVAQRCKELG
101: ITAMHVKLRA TGGNKTKTPG PGAQSALRAL ARSGMKIGRI EDVTPVPTDS TRRKGGRRGR RL

Best Arabidopsis Sequence Match ( AT3G52580.1 )
(BLAST)

001: MSKRKTKEPK VENVTLGPAV REGEQVFGVV HVFASFNDTF IHVTDLSGRE TLVRITGGMK VKADRDESSP YAAMLAAQDV AQRCKELGIT AIHVKLRATG
101: GNKTKTPGPG AQSALRALAR SGMKIGRIED VTPIPTDSTR RKGGRRGRRL

Arabidopsis Description

RPS14C40S ribosomal protein S14-3 [Source:UniProtKB/Swiss-Prot;Acc:P42036]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.