Factsheet for Zm00001d036565_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0162500-01	Rice	nucleus, plasma membrane	64.56	88.67
KXG20642	Sorghum	cytosol	66.5	86.16
TraesCS6D01G126300.1	Wheat	cytosol	62.62	86.0
TraesCS6A01G137300.1	Wheat	cytosol	62.62	86.0
Solyc10g083280.1.1	Tomato	extracellular, nucleus	62.14	85.33
Solyc09g010100.2.1	Tomato	cytosol	62.14	85.33
Bra005296.1-P	Field mustard	cytosol	62.14	85.33
Bra009165.1-P	Field mustard	cytosol	62.14	85.33
Bra023052.1-P	Field mustard	cytosol	62.14	85.33
PGSC0003DMT400054512	Potato	cytosol	61.65	84.67
PGSC0003DMT400022864	Potato	cytosol	61.65	84.67
KRH68612	Soybean	cytosol	61.65	84.67
PGSC0003DMT400072364	Potato	cytosol	61.65	84.67
KRH21050	Soybean	cytosol	61.65	84.67
Solyc02g070570.2.1	Tomato	nucleus	61.65	84.67
KRG96883	Soybean	endoplasmic reticulum, nucleus	61.65	84.67
KRG96881	Soybean	cytosol	61.65	84.67
Bra034833.1-P	Field mustard	cytosol	61.65	84.67
AT3G11510.1	Thale cress	cytosol	61.16	84.0
KRH11201	Soybean	nucleus	61.16	84.0
Bra001406.1-P	Field mustard	cytosol	61.16	84.0
AT3G52580.1	Thale cress	cytosol	61.16	84.0
AT2G36160.1	Thale cress	cytosol	60.68	83.33
Zm00001d036568_P001	Maize	cytosol, mitochondrion	65.53	78.95
Bra002045.1-P	Field mustard	cytosol	61.65	78.4
Zm00001d000120_P003	Maize	mitochondrion	62.62	77.71
Zm00001d036567_P002	Maize	cytosol	80.58	76.85
KRH68609	Soybean	cytosol	61.65	76.51
Zm00001d046583_P001	Maize	endoplasmic reticulum	64.56	73.89
VIT_06s0080g00740.t01	Wine grape	cytosol	65.05	73.22
Zm00001d014462_P002	Maize	cytosol	55.83	71.88
Zm00001d052553_P001	Maize	cytosol	35.44	65.18
Zm00001d000104_P001	Maize	cytosol	33.01	60.71

Protein Annotations

EntrezGene:100192550	EntrezGene:103629630	EntrezGene:103629631	MapMan:17.1.3.1.15	Gene3D:3.30.420.80	UniProt:A0A1D6LPD7
ProteinID:AQK81383.1	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	InterPro:IPR036967	HAMAP:MF_01310	PFAM:PF00411
PANTHER:PTHR11759	PANTHER:PTHR11759:SF11	InterPro:Ribosomal_S11	InterPro:Ribosomal_S11_sf	SUPFAM:SSF53137	UniParc:UPI0008432C46
EnsemblPlantsGene:Zm00001d036565	EnsemblPlants:Zm00001d036565_P002	EnsemblPlants:Zm00001d036565_T002	SEG:seg	:	:

Description

40S ribosomal protein S14-3

Coordinates

chr6:-:92667282..92669969

Molecular Weight (calculated)

22139.1 Da

IEP (calculated)

10.429

GRAVY (calculated)

-0.017

Length

206 amino acids

Sequence
(BLAST)

001: MSRRKTREPK EENVTLGPTV REGEYVFGVA HIFASFNDTF IHITDLSGRE TLVRITGGMK VKADRDESSP YAAMLAAQDV AQRCKELGIT ALHIKLRATG
101: GNKTKTPGPG AQSALRALAR SGMKIGRIGK EVLDLSRAGW PVLRTLPRSP LTALAERAVG GEGGCRRLVC VAFAGSWPVA IMKLALSGWC CCSVFVKTSF
201: NFALCG

Best Arabidopsis Sequence Match ( AT2G36160.1 )
(BLAST)

001: MSKRKTKEPK VDVVTLGPSV REGEQVFGVV HIFASFNDTF IHVTDLSGRE TLVRITGGMK VKADRDESSP YAAMLAAQDV AQRCKELGIT AMHVKLRATG
101: GNKTKTPGPG AQSALRALAR SGMKIGRIED VTPIPTDSTR RKGGRRGRRL

Arabidopsis Description

RPS14A40S ribosomal protein S14-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIH0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.