Factsheet for Zm00001d046583_P001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

plastid 1
extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES12290	Sorghum	cytosol	81.67	98.0
EER88715	Sorghum	cytosol	81.67	98.0
EER88707	Sorghum	cytosol	81.67	98.0
Os02t0162500-01	Rice	nucleus, plasma membrane	81.11	97.33
TraesCS7B01G355300.1	Wheat	cytosol, golgi, nucleus, plastid, unclear	80.0	95.36
HORVU7Hr1G104220.3	Barley	cytosol, plasma membrane	80.0	95.36
TraesCS6A01G137300.1	Wheat	cytosol	79.44	95.33
TraesCS6D01G126300.1	Wheat	cytosol	79.44	95.33
Bra023052.1-P	Field mustard	cytosol	78.33	94.0
Bra034833.1-P	Field mustard	cytosol	78.33	94.0
Bra005296.1-P	Field mustard	cytosol	78.33	94.0
Solyc10g083280.1.1	Tomato	extracellular, nucleus	78.33	94.0
Bra009165.1-P	Field mustard	cytosol	78.33	94.0
Solyc09g010100.2.1	Tomato	cytosol	78.33	94.0
PGSC0003DMT400072364	Potato	cytosol	77.78	93.33
PGSC0003DMT400054512	Potato	cytosol	77.78	93.33
PGSC0003DMT400022864	Potato	cytosol	77.78	93.33
KRH68612	Soybean	cytosol	77.78	93.33
Solyc02g070570.2.1	Tomato	nucleus	77.78	93.33
KRH21050	Soybean	cytosol	77.78	93.33
KRG96883	Soybean	endoplasmic reticulum, nucleus	77.78	93.33
KRG96881	Soybean	cytosol	77.78	93.33
AT3G11510.1	Thale cress	cytosol	77.22	92.67
KRH11201	Soybean	nucleus	77.22	92.67
Bra001406.1-P	Field mustard	cytosol	77.22	92.67
AT3G52580.1	Thale cress	cytosol	77.22	92.67
AT2G36160.1	Thale cress	cytosol	76.67	92.0
Zm00001d036568_P001	Maize	cytosol, mitochondrion	84.44	88.89
Bra002045.1-P	Field mustard	cytosol	79.44	88.27
Zm00001d000120_P003	Maize	mitochondrion	80.56	87.35
KRH68609	Soybean	cytosol	77.78	84.34
Zm00001d014462_P002	Maize	cytosol	67.22	75.62
Zm00001d052553_P001	Maize	cytosol	40.56	65.18
Zm00001d036565_P002	Maize	cytosol	73.89	64.56
Zm00001d036567_P002	Maize	cytosol	72.78	60.65
Zm00001d000104_P001	Maize	cytosol	37.22	59.82

Protein Annotations

MapMan:17.1.3.1.15	Gene3D:3.30.420.80	UniProt:A0A1D6P3R8	ProteinID:AQL04633.1	GO:GO:0003674	GO:GO:0003735
GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840
GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538
GO:GO:0030529	InterPro:IPR036967	HAMAP:MF_01310	PFAM:PF00411	PIRSF:PIRSF002131	ScanProsite:PS00054
PANTHER:PTHR11759	PANTHER:PTHR11759:SF11	InterPro:Ribosomal_S11	InterPro:Ribosomal_S11_CS	InterPro:Ribosomal_S11_sf	SUPFAM:SSF53137
SignalP:SignalP-noTM	UniParc:UPI000844A791	EnsemblPlantsGene:Zm00001d046583	EnsemblPlants:Zm00001d046583_P001	EnsemblPlants:Zm00001d046583_T001	SEG:seg

Description

40S ribosomal protein S14

Coordinates

chr9:-:97236468..97238511

Molecular Weight (calculated)

19611.9 Da

IEP (calculated)

10.977

GRAVY (calculated)

-0.286

Length

180 amino acids

Sequence
(BLAST)

001: MVHSLCMVKL FLVVVNTTIN SMSSDSSICL QSRRKTREPK EENVTLGPTV REGEFVFGVA HIFASFNDTF IHVTDLSGRE TLVRITGGMK VKADRDESSP
101: YAAMLAAQDV AQRCKELGIT ALHIKLRATG GNKTKTPGPG AQSALRALAR SGMKIGRIED VTPVPTDSTR RKGGRRGRRL

Best Arabidopsis Sequence Match ( ATCG00750.1 )
(BLAST)

001: MAKPILRIGS RKNTRSGSRK NVRRIPKGVI HVQASFNNTI VTVTDVRGRV ISWSSAGTCG FRGTRRGTPF AAQTAAGNAI RAVVDQGMQR AEVRIKGPGL
101: GRDAALRAIR RSGILLSFVR DVTPMPHNGC RPPKKRRV

Arabidopsis Description

RPS1130S ribosomal protein S11, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A1B1W4X8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.