Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 5
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc10g083280.1.1 | Tomato | extracellular, nucleus | 100.0 | 100.0 |
| PGSC0003DMT400022864 | Potato | cytosol | 99.33 | 99.33 |
| Solyc02g070570.2.1 | Tomato | nucleus | 97.33 | 97.33 |
| EER88707 | Sorghum | cytosol | 94.0 | 94.0 |
| EER88715 | Sorghum | cytosol | 94.0 | 94.0 |
| EES12290 | Sorghum | cytosol | 94.0 | 94.0 |
| Bra005296.1-P | Field mustard | cytosol | 94.0 | 94.0 |
| Bra009165.1-P | Field mustard | cytosol | 94.0 | 94.0 |
| Bra023052.1-P | Field mustard | cytosol | 94.0 | 94.0 |
| Os02t0162500-01 | Rice | nucleus, plasma membrane | 93.33 | 93.33 |
| Bra034833.1-P | Field mustard | cytosol | 92.67 | 92.67 |
| TraesCS6A01G137300.1 | Wheat | cytosol | 92.67 | 92.67 |
| Bra001406.1-P | Field mustard | cytosol | 92.67 | 92.67 |
| TraesCS6D01G126300.1 | Wheat | cytosol | 92.67 | 92.67 |
| HORVU7Hr1G104220.3 | Barley | cytosol, plasma membrane | 92.67 | 92.05 |
| TraesCS7B01G355300.1 | Wheat | cytosol, golgi, nucleus, plastid, unclear | 92.67 | 92.05 |
| AT3G11510.1 | Thale cress | cytosol | 92.0 | 92.0 |
| CDX84154 | Canola | cytosol | 93.33 | 91.5 |
| CDX84577 | Canola | cytosol | 93.33 | 91.5 |
| AT3G52580.1 | Thale cress | cytosol | 91.33 | 91.33 |
| TraesCS6B01G165600.1 | Wheat | cytosol | 92.0 | 90.79 |
| AT2G36160.1 | Thale cress | cytosol | 90.67 | 90.67 |
| CDX75067 | Canola | cytosol | 93.33 | 89.17 |
| CDX98905 | Canola | cytosol | 93.33 | 87.5 |
| CDY08517 | Canola | cytosol | 93.33 | 87.5 |
| Bra002045.1-P | Field mustard | cytosol | 92.67 | 85.8 |
| CDY60438 | Canola | cytosol | 94.0 | 84.94 |
| CDY01031 | Canola | cytosol | 94.0 | 84.43 |
| Zm00001d036568_P001 | Maize | cytosol, mitochondrion | 93.33 | 81.87 |
| CDX73621 | Canola | cytosol | 93.33 | 81.4 |
| CDY26067 | Canola | cytosol | 92.67 | 79.43 |
| Zm00001d046583_P001 | Maize | endoplasmic reticulum | 94.0 | 78.33 |
| CDY71084 | Canola | cytosol | 50.67 | 76.77 |
| Zm00001d014462_P002 | Maize | cytosol | 77.33 | 72.5 |
| KXG20642 | Sorghum | cytosol | 74.0 | 69.81 |
| CDX73872 | Canola | cytosol | 94.0 | 66.51 |
| CDY00737 | Canola | cytosol | 94.0 | 66.51 |
| CDY71908 | Canola | plastid | 93.33 | 64.52 |
| Zm00001d052553_P001 | Maize | cytosol | 48.0 | 64.29 |
| Zm00001d036565_P002 | Maize | cytosol | 85.33 | 62.14 |
| Zm00001d036567_P002 | Maize | cytosol | 84.0 | 58.33 |
| Zm00001d000104_P001 | Maize | cytosol | 43.33 | 58.04 |
| CDY43745 | Canola | cytosol, plasma membrane | 93.33 | 57.14 |
| HORVU6Hr1G085630.1 | Barley | cytosol, nucleus | 14.67 | 52.38 |
| HORVU1Hr1G076240.1 | Barley | endoplasmic reticulum, extracellular, vacuole | 20.0 | 42.86 |
| HORVU1Hr1G058980.1 | Barley | cytosol | 20.0 | 39.47 |
| HORVU7Hr1G091030.1 | Barley | cytosol | 19.33 | 38.16 |
| HORVU6Hr1G026350.1 | Barley | cytosol | 24.67 | 32.46 |
Protein Annotations
| MapMan:17.1.3.1.15 | Gene3D:3.30.420.80 | GO:GO:0000028 | GO:GO:0000462 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003723 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0005840 | GO:GO:0006139 | GO:GO:0006412 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0019538 |
| GO:GO:0022627 | GO:GO:0030529 | GO:GO:0048027 | GO:GO:0070181 | InterPro:IPR036967 | UniProt:K4D3B5 |
| HAMAP:MF_01310 | PFAM:PF00411 | PIRSF:PIRSF002131 | ScanProsite:PS00054 | PANTHER:PTHR11759 | PANTHER:PTHR11759:SF11 |
| InterPro:Ribosomal_S11 | InterPro:Ribosomal_S11_CS | InterPro:Ribosomal_S11_sf | SUPFAM:SSF53137 | EnsemblPlantsGene:Solyc09g010100.2 | EnsemblPlants:Solyc09g010100.2.1 |
| UniParc:UPI00005FEB9E | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr9:-:3488735..3491402
Molecular Weight (calculated)
16345.8 Da
IEP (calculated)
11.360
GRAVY (calculated)
-0.577
Length
150 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRRKTREPK EETVTLGPAT REGELVFGVA HIFASFNDTF IHVTDLSGRE TMVRITGGMK VKADRDESSP YAAMLAAQDV SQRCKELGIN ALHIKLRATG
101: GNKTKTPGPG AQSALRALAR SGMKIGRIED VTPIPTDSTR RKGGRRGRRL
101: GNKTKTPGPG AQSALRALAR SGMKIGRIED VTPIPTDSTR RKGGRRGRRL
001: MSKRKTKEPK VETVTLGPSV REGEQVFGVV HIFASFNDTF IHVTDLSGRE TLVRITGGMK VKADRDESSP YAAMLAAQDV AQRCKELGIT AMHVKLRATG
101: GNKTKTPGPG AQSALRALAR SGMKIGRIED VTPIPTDSTR RKGGRRGRRL
101: GNKTKTPGPG AQSALRALAR SGMKIGRIED VTPIPTDSTR RKGGRRGRRL
Arabidopsis Description
RPS14BAt3g11510 [Source:UniProtKB/TrEMBL;Acc:Q1H555]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.