Factsheet for Zm00001d036568_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 1
mitochondrion 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid, secretory
iPSORT:	plastid
MultiLoc:	mitochondrion
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES12290	Sorghum	cytosol	85.96	98.0
EER88715	Sorghum	cytosol	85.96	98.0
EER88707	Sorghum	cytosol	85.96	98.0
Os02t0162500-01	Rice	nucleus, plasma membrane	85.38	97.33
TraesCS7B01G355300.1	Wheat	cytosol, golgi, nucleus, plastid, unclear	83.63	94.7
HORVU7Hr1G104220.3	Barley	cytosol, plasma membrane	83.63	94.7
TraesCS6A01G137300.1	Wheat	cytosol	83.04	94.67
TraesCS6D01G126300.1	Wheat	cytosol	83.04	94.67
Bra023052.1-P	Field mustard	cytosol	81.87	93.33
Bra034833.1-P	Field mustard	cytosol	81.87	93.33
Bra005296.1-P	Field mustard	cytosol	81.87	93.33
Solyc10g083280.1.1	Tomato	extracellular, nucleus	81.87	93.33
Bra009165.1-P	Field mustard	cytosol	81.87	93.33
Solyc09g010100.2.1	Tomato	cytosol	81.87	93.33
PGSC0003DMT400072364	Potato	cytosol	81.29	92.67
PGSC0003DMT400054512	Potato	cytosol	81.29	92.67
PGSC0003DMT400022864	Potato	cytosol	81.29	92.67
KRH68612	Soybean	cytosol	81.29	92.67
Solyc02g070570.2.1	Tomato	nucleus	81.29	92.67
KRH21050	Soybean	cytosol	81.29	92.67
KRG96883	Soybean	endoplasmic reticulum, nucleus	81.29	92.67
KRG96881	Soybean	cytosol	81.29	92.67
AT3G11510.1	Thale cress	cytosol	80.7	92.0
KRH11201	Soybean	nucleus	80.7	92.0
Bra001406.1-P	Field mustard	cytosol	80.7	92.0
AT3G52580.1	Thale cress	cytosol	80.7	92.0
AT2G36160.1	Thale cress	cytosol	80.12	91.33
Bra002045.1-P	Field mustard	cytosol	83.04	87.65
Zm00001d000120_P003	Maize	mitochondrion	84.8	87.35
Zm00001d046583_P001	Maize	endoplasmic reticulum	88.89	84.44
KRH68609	Soybean	cytosol	81.29	83.73
Zm00001d014462_P002	Maize	cytosol	71.34	76.25
Zm00001d036565_P002	Maize	cytosol	78.95	65.53
Zm00001d052553_P001	Maize	cytosol	42.69	65.18
Zm00001d036567_P002	Maize	cytosol	77.78	61.57
Zm00001d000104_P001	Maize	cytosol	39.18	59.82

Protein Annotations

EntrezGene:100192550	EntrezGene:103629630	EntrezGene:103629631	MapMan:17.1.3.1.15	Gene3D:3.30.420.80	UniProt:A0A1D6LPH1
ProteinID:AQK81399.1	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	GO:GO:0030529	InterPro:IPR036967	HAMAP:MF_01310
PFAM:PF00411	PIRSF:PIRSF002131	ScanProsite:PS00054	PANTHER:PTHR11759	PANTHER:PTHR11759:SF11	InterPro:Ribosomal_S11
InterPro:Ribosomal_S11_CS	InterPro:Ribosomal_S11_sf	SUPFAM:SSF53137	SignalP:SignalP-noTM	UniParc:UPI0008438977	EnsemblPlantsGene:Zm00001d036568
EnsemblPlants:Zm00001d036568_P001	EnsemblPlants:Zm00001d036568_T001	SEG:seg	:	:	:

Description

40S ribosomal protein S14-3

Coordinates

chr6:-:92896926..92899882

Molecular Weight (calculated)

18763.8 Da

IEP (calculated)

10.934

GRAVY (calculated)

-0.388

Length

171 amino acids

Sequence
(BLAST)

001: MVSEPLLVWL WLASGRSCMC LQSRRKTREP KEENVTLGPT VREGEYVFGV AHIFASFNDT FIHITDLSGR ETLVRITGGM KVKADRDESS PYAAMLAAQD
101: VAQRCKELGI TALHIKLRAT GGNKTKTPGP GAQSALRALA RSGMKIGRIE DVTPVPTDST RRKGGRRGRR L

Best Arabidopsis Sequence Match ( AT2G36160.1 )
(BLAST)

001: MSKRKTKEPK VDVVTLGPSV REGEQVFGVV HIFASFNDTF IHVTDLSGRE TLVRITGGMK VKADRDESSP YAAMLAAQDV AQRCKELGIT AMHVKLRATG
101: GNKTKTPGPG AQSALRALAR SGMKIGRIED VTPIPTDSTR RKGGRRGRRL

Arabidopsis Description

RPS14A40S ribosomal protein S14-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIH0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.