Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G073150.1 | Barley | cytosol | 89.76 | 98.68 |
| TraesCS2D01G293400.1 | Wheat | cytosol, golgi, unclear | 89.16 | 98.01 |
| TraesCS2D01G293300.1 | Wheat | cytosol | 89.16 | 98.01 |
| TraesCS2B01G312000.1 | Wheat | cytosol | 89.16 | 98.01 |
| TraesCS2A01G295600.1 | Wheat | cytosol | 89.16 | 98.01 |
| Os04t0413600-01 | Rice | cytosol, nucleus | 89.16 | 98.01 |
| GSMUA_Achr6P06980_001 | Banana | cytosol | 83.73 | 90.85 |
| Zm00001d036568_P001 | Maize | cytosol, mitochondrion | 87.35 | 84.8 |
| HORVU0Hr1G004130.1 | Barley | plastid | 91.57 | 81.28 |
| Zm00001d046583_P001 | Maize | endoplasmic reticulum | 87.35 | 80.56 |
| GSMUA_AchrUn_... | Banana | cytosol | 88.55 | 79.89 |
| GSMUA_Achr9P02560_001 | Banana | mitochondrion | 87.95 | 79.35 |
| GSMUA_Achr9P02230_001 | Banana | mitochondrion | 88.55 | 79.03 |
| Zm00001d014462_P002 | Maize | cytosol | 70.48 | 73.12 |
| Zm00001d052553_P001 | Maize | cytosol | 44.58 | 66.07 |
| Zm00001d036565_P002 | Maize | cytosol | 77.71 | 62.62 |
| GSMUA_Achr2P20380_001 | Banana | mitochondrion | 88.55 | 62.55 |
| Zm00001d000104_P001 | Maize | cytosol | 40.96 | 60.71 |
| Zm00001d036567_P002 | Maize | cytosol | 76.51 | 58.8 |
| OQU85061 | Sorghum | cytosol, nucleus, plastid | 57.83 | 53.63 |
Protein Annotations
| EntrezGene:100216896 | MapMan:17.1.3.1.15 | Gene3D:3.30.420.80 | UniProt:A0A1X7YF18 | GO:GO:0003674 | GO:GO:0003735 |
| GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 |
| GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 |
| GO:GO:0030529 | InterPro:IPR036967 | HAMAP:MF_01310 | PFAM:PF00411 | PIRSF:PIRSF002131 | ScanProsite:PS00054 |
| PANTHER:PTHR11759 | PANTHER:PTHR11759:SF11 | InterPro:Ribosomal_S11 | InterPro:Ribosomal_S11_CS | InterPro:Ribosomal_S11_sf | SUPFAM:SSF53137 |
| UniParc:UPI000221E681 | EnsemblPlantsGene:Zm00001d000120 | EnsemblPlants:Zm00001d000120_P003 | EnsemblPlants:Zm00001d000120_T003 | SEG:seg | : |
Description
maize CRY1 homolog2 maize CRY1 homolog2
Coordinates
chrB73V4_ctg142:-:542739..545311
Molecular Weight (calculated)
18121.9 Da
IEP (calculated)
11.381
GRAVY (calculated)
-0.476
Length
166 amino acids
Sequence
(BLAST)
(BLAST)
001: MTAVLLFLRR WSDAVQSGRK KTREPKEENV TLGPAVREGE HVFGVAHIFA SFNDTFIHVT DLSGRETLVR ITGGMKVKAD RDESSPYAAM LASQDVAQRC
101: KELGITALHI KLRATGGNKT KTPGPGAQSA LRALARSGMK IGRIEDVTPV PTDSTRRKGG RRGRRL
101: KELGITALHI KLRATGGNKT KTPGPGAQSA LRALARSGMK IGRIEDVTPV PTDSTRRKGG RRGRRL
001: MSKRKTKEPK VDVVTLGPSV REGEQVFGVV HIFASFNDTF IHVTDLSGRE TLVRITGGMK VKADRDESSP YAAMLAAQDV AQRCKELGIT AMHVKLRATG
101: GNKTKTPGPG AQSALRALAR SGMKIGRIED VTPIPTDSTR RKGGRRGRRL
101: GNKTKTPGPG AQSALRALAR SGMKIGRIED VTPIPTDSTR RKGGRRGRRL
Arabidopsis Description
RPS14A40S ribosomal protein S14-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIH0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.