Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- peroxisome 1
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G073150.1 | Barley | cytosol | 88.89 | 90.07 |
| Os02t0534800-01 | Rice | cytosol | 88.89 | 90.07 |
| Os04t0413600-01 | Rice | cytosol, nucleus | 88.89 | 90.07 |
| TraesCS2A01G295600.1 | Wheat | cytosol | 88.24 | 89.4 |
| TraesCS2B01G312000.1 | Wheat | cytosol | 88.24 | 89.4 |
| TraesCS2D01G293300.1 | Wheat | cytosol | 88.24 | 89.4 |
| TraesCS2D01G293400.1 | Wheat | cytosol, golgi, unclear | 88.24 | 89.4 |
| Zm00001d000120_P003 | Maize | mitochondrion | 90.85 | 83.73 |
| GSMUA_Achr9P02560_001 | Banana | mitochondrion | 90.85 | 75.54 |
| GSMUA_AchrUn_... | Banana | cytosol | 90.85 | 75.54 |
| GSMUA_Achr9P02230_001 | Banana | mitochondrion | 90.85 | 74.73 |
| HORVU0Hr1G004130.1 | Barley | plastid | 88.24 | 72.19 |
| GSMUA_Achr2P20380_001 | Banana | mitochondrion | 91.5 | 59.57 |
| OQU85061 | Sorghum | cytosol, nucleus, plastid | 56.86 | 48.6 |
Protein Annotations
| MapMan:17.1.3.1.15 | Gene3D:3.30.420.80 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | EnsemblPlantsGene:GSMUA_Achr6G06980_001 | EnsemblPlants:GSMUA_Achr6P06980_001 |
| EnsemblPlants:GSMUA_Achr6T06980_001 | InterPro:IPR036967 | UniProt:M0T4U7 | HAMAP:MF_01310 | PFAM:PF00411 | PIRSF:PIRSF002131 |
| PANTHER:PTHR11759 | PANTHER:PTHR11759:SF11 | InterPro:Ribosomal_S11 | InterPro:Ribosomal_S11_sf | SUPFAM:SSF53137 | UniParc:UPI000294EF73 |
| SEG:seg | : | : | : | : | : |
Description
40S ribosomal protein S14 [Source:GMGC_GENE;Acc:GSMUA_Achr6G06980_001]
Coordinates
chr6:-:4743053..4747334
Molecular Weight (calculated)
16555.0 Da
IEP (calculated)
11.073
GRAVY (calculated)
-0.397
Length
153 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVQSGRRKT REPKEENVTL GPAVREGEQV FGVAHIFASF NDTFIVAHLS GRETLVRIIG VMKVKADRDE SSPYAAMLAA QDVAQRCKEL GITALHIKLR
101: ATGGNKTKTP GPGAQSALRA LARFGMKIGR IEDVTPIPTD SSTSRKGGRR GRL
101: ATGGNKTKTP GPGAQSALRA LARFGMKIGR IEDVTPIPTD SSTSRKGGRR GRL
001: MSKRKTKEPK VENVTLGPAV REGEQVFGVV HVFASFNDTF IHVTDLSGRE TLVRITGGMK VKADRDESSP YAAMLAAQDV AQRCKELGIT AIHVKLRATG
101: GNKTKTPGPG AQSALRALAR SGMKIGRIED VTPIPTDSTR RKGGRRGRRL
101: GNKTKTPGPG AQSALRALAR SGMKIGRIED VTPIPTDSTR RKGGRRGRRL
Arabidopsis Description
RPS14C40S ribosomal protein S14-3 [Source:UniProtKB/Swiss-Prot;Acc:P42036]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.