Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 5
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| nucleus:
23777608
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os02t0534800-01 | Rice | cytosol | 100.0 | 100.0 |
| TraesCS2A01G295600.1 | Wheat | cytosol | 97.35 | 97.35 |
| TraesCS2B01G312000.1 | Wheat | cytosol | 97.35 | 97.35 |
| TraesCS2D01G293300.1 | Wheat | cytosol | 97.35 | 97.35 |
| TraesCS2D01G293400.1 | Wheat | cytosol, golgi, unclear | 97.35 | 97.35 |
| Os02t0162500-01 | Rice | nucleus, plasma membrane | 96.69 | 97.33 |
| HORVU2Hr1G073150.1 | Barley | cytosol | 96.69 | 96.69 |
| Zm00001d000120_P003 | Maize | mitochondrion | 98.01 | 89.16 |
| GSMUA_Achr6P06980_001 | Banana | cytosol | 90.07 | 88.89 |
| GSMUA_Achr9P02560_001 | Banana | mitochondrion | 96.69 | 79.35 |
| GSMUA_AchrUn_... | Banana | cytosol | 96.69 | 79.35 |
| HORVU0Hr1G004130.1 | Barley | plastid | 97.35 | 78.61 |
| GSMUA_Achr9P02230_001 | Banana | mitochondrion | 96.69 | 78.49 |
| GSMUA_Achr2P20380_001 | Banana | mitochondrion | 97.35 | 62.55 |
| OQU85061 | Sorghum | cytosol, nucleus, plastid | 61.59 | 51.96 |
Protein Annotations
| MapMan:17.1.3.1.15 | Gene3D:3.30.420.80 | EntrezGene:4329563 | EntrezGene:4335791 | EMBL:AK101459 | EMBL:AK121192 |
| ProteinID:BAD27798.1 | ProteinID:BAD29299.1 | ProteinID:BAF08950.1 | ProteinID:BAF14663.1 | ProteinID:BAS79056.1 | ProteinID:BAS89137.1 |
| ProteinID:CAE02065.2 | ProteinID:EEE57126.1 | GO:GO:0000028 | GO:GO:0000462 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003723 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0005840 | GO:GO:0006139 | GO:GO:0006412 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0019538 |
| GO:GO:0022627 | GO:GO:0048027 | GO:GO:0070181 | InterPro:IPR036967 | HAMAP:MF_01310 | EnsemblPlantsGene:Os04g0413600 |
| EnsemblPlants:Os04t0413600-01 | PFAM:PF00411 | PIRSF:PIRSF002131 | ScanProsite:PS00054 | PANTHER:PTHR11759 | PANTHER:PTHR11759:SF11 |
| UniProt:Q7XSA6 | InterPro:Ribosomal_S11 | InterPro:Ribosomal_S11_CS | InterPro:Ribosomal_S11_sf | SUPFAM:SSF53137 | UniParc:UPI000021C80E |
| RefSeq:XP_015627702.1 | RefSeq:XP_015633584.1 | SEG:seg | : | : | : |
Description
Similar to 40S ribosomal protein S14 (Clone MCH2). (Os04t0413600-01)
Coordinates
chr4:-:20432529..20435754
Molecular Weight (calculated)
16420.8 Da
IEP (calculated)
11.128
GRAVY (calculated)
-0.579
Length
151 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGRKKTREP KEENVTLGPT VREGEYVFGV AHIFASFNDT FIHVTDLSGR ETLVRITGGM KVKADRDESS PYAAMLASQD VAQRCKELGI TALHIKLRAT
101: GGNKTKTPGP GAQSALRALA RSGMKIGRIE DVTPVPTDST RRKGGRRGRR L
101: GGNKTKTPGP GAQSALRALA RSGMKIGRIE DVTPVPTDST RRKGGRRGRR L
001: MSKRKTKEPK VENVTLGPAV REGEQVFGVV HVFASFNDTF IHVTDLSGRE TLVRITGGMK VKADRDESSP YAAMLAAQDV AQRCKELGIT AIHVKLRATG
101: GNKTKTPGPG AQSALRALAR SGMKIGRIED VTPIPTDSTR RKGGRRGRRL
101: GNKTKTPGPG AQSALRALAR SGMKIGRIED VTPIPTDSTR RKGGRRGRRL
Arabidopsis Description
RPS14C40S ribosomal protein S14-3 [Source:UniProtKB/Swiss-Prot;Acc:P42036]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.