Factsheet for Zm00001d052553_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d000104_P001	Maize	cytosol	59.82	59.82
Solyc10g083280.1.1	Tomato	extracellular, nucleus	64.29	48.0
Solyc09g010100.2.1	Tomato	cytosol	64.29	48.0
Solyc02g070570.2.1	Tomato	nucleus	64.29	48.0
PGSC0003DMT400072364	Potato	cytosol	64.29	48.0
PGSC0003DMT400054512	Potato	cytosol	64.29	48.0
PGSC0003DMT400022864	Potato	cytosol	64.29	48.0
KRH68612	Soybean	cytosol	64.29	48.0
KRH21050	Soybean	cytosol	64.29	48.0
KRG96883	Soybean	endoplasmic reticulum, nucleus	64.29	48.0
KRG96881	Soybean	cytosol	64.29	48.0
AT3G52580.1	Thale cress	cytosol	64.29	48.0
Bra034833.1-P	Field mustard	cytosol	63.39	47.33
KRH11201	Soybean	nucleus	63.39	47.33
Bra023052.1-P	Field mustard	cytosol	63.39	47.33
AT2G36160.1	Thale cress	cytosol	63.39	47.33
Bra009165.1-P	Field mustard	cytosol	63.39	47.33
Bra005296.1-P	Field mustard	cytosol	63.39	47.33
Bra001406.1-P	Field mustard	cytosol	63.39	47.33
AT3G11510.1	Thale cress	cytosol	63.39	47.33
Zm00001d000120_P003	Maize	mitochondrion	66.07	44.58
HORVU1Hr1G076240.1	Barley	endoplasmic reticulum, extracellular, vacuole	27.68	44.29
Bra002045.1-P	Field mustard	cytosol	63.39	43.83
KRH68609	Soybean	cytosol	64.29	43.37
Zm00001d036568_P001	Maize	cytosol, mitochondrion	65.18	42.69
Zm00001d014462_P002	Maize	cytosol	58.93	41.25
VIT_17s0000g10380.t01	Wine grape	cytosol	41.96	41.23
HORVU1Hr1G058980.1	Barley	cytosol	27.68	40.79
Zm00001d046583_P001	Maize	endoplasmic reticulum	65.18	40.56
HORVU7Hr1G091030.1	Barley	cytosol	26.79	39.47
Zm00001d036565_P002	Maize	cytosol	65.18	35.44
Zm00001d036567_P002	Maize	cytosol	65.18	33.8
VIT_11s0103g00410.t01	Wine grape	cytosol	27.68	31.31
VIT_17s0000g10400.t01	Wine grape	nucleus	8.93	15.38
CDY26068	Canola	extracellular	3.57	10.0

Protein Annotations

MapMan:17.1.3.1.15	Gene3D:3.30.420.80	UniProt:A0A1D6QHR9	ProteinID:AQK57416.1	GO:GO:0003674	GO:GO:0003735
GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840
GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538
InterPro:IPR036967	PFAM:PF00411	PANTHER:PTHR11759	PANTHER:PTHR11759:SF11	InterPro:Ribosomal_S11	InterPro:Ribosomal_S11_sf
SUPFAM:SSF53137	UniParc:UPI0008439D3A	EnsemblPlantsGene:Zm00001d052553	EnsemblPlants:Zm00001d052553_P001	EnsemblPlants:Zm00001d052553_T001	SEG:seg

Description

40S ribosomal protein S14-3

Coordinates

chr4:+:192878895..192880111

Molecular Weight (calculated)

12106.8 Da

IEP (calculated)

10.111

GRAVY (calculated)

-0.146

Length

112 amino acids

Sequence
(BLAST)

001: MAAFELDSVW LYDRLLGEIQ LHGGMKVKAD RDESSPYAAM LASQDVTQRC KVLSYCGKIH LLSELGITAL HIKLRATGGN KTKTPGPGAQ SALRALARSG
101: MKIGRISKHA DI

Best Arabidopsis Sequence Match ( AT3G52580.1 )
(BLAST)

001: MSKRKTKEPK VENVTLGPAV REGEQVFGVV HVFASFNDTF IHVTDLSGRE TLVRITGGMK VKADRDESSP YAAMLAAQDV AQRCKELGIT AIHVKLRATG
101: GNKTKTPGPG AQSALRALAR SGMKIGRIED VTPIPTDSTR RKGGRRGRRL

Arabidopsis Description

RPS14C40S ribosomal protein S14-3 [Source:UniProtKB/Swiss-Prot;Acc:P42036]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.