Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G11510.1 | Thale cress | cytosol | 97.33 | 97.33 |
| AT2G36160.1 | Thale cress | cytosol | 96.67 | 96.67 |
| TraesCS6D01G126300.1 | Wheat | cytosol | 94.0 | 94.0 |
| TraesCS6A01G137300.1 | Wheat | cytosol | 94.0 | 94.0 |
| Os02t0162500-01 | Rice | nucleus, plasma membrane | 93.33 | 93.33 |
| EER88707 | Sorghum | cytosol | 92.67 | 92.67 |
| EER88715 | Sorghum | cytosol | 92.67 | 92.67 |
| EES12290 | Sorghum | cytosol | 92.67 | 92.67 |
| TraesCS6B01G165600.1 | Wheat | cytosol | 93.33 | 92.11 |
| TraesCS7B01G355300.1 | Wheat | cytosol, golgi, nucleus, plastid, unclear | 92.67 | 92.05 |
| HORVU7Hr1G104220.3 | Barley | cytosol, plasma membrane | 92.67 | 92.05 |
| PGSC0003DMT400072364 | Potato | cytosol | 92.0 | 92.0 |
| PGSC0003DMT400022864 | Potato | cytosol | 92.0 | 92.0 |
| Solyc10g083280.1.1 | Tomato | extracellular, nucleus | 91.33 | 91.33 |
| Solyc09g010100.2.1 | Tomato | cytosol | 91.33 | 91.33 |
| Solyc02g070570.2.1 | Tomato | nucleus | 91.33 | 91.33 |
| PGSC0003DMT400054512 | Potato | cytosol | 91.33 | 91.33 |
| KRH21050 | Soybean | cytosol | 90.67 | 90.67 |
| KRH68612 | Soybean | cytosol | 90.67 | 90.67 |
| KRG96883 | Soybean | endoplasmic reticulum, nucleus | 90.67 | 90.67 |
| KRG96881 | Soybean | cytosol | 90.67 | 90.67 |
| KRH11201 | Soybean | nucleus | 90.0 | 90.0 |
| VIT_08s0007g03020.t01 | Wine grape | cytosol | 91.33 | 84.05 |
| CDX73621 | Canola | cytosol | 94.67 | 82.56 |
| KRH68609 | Soybean | cytosol | 90.67 | 81.93 |
| Zm00001d036568_P001 | Maize | cytosol, mitochondrion | 92.0 | 80.7 |
| CDY26067 | Canola | cytosol | 94.0 | 80.57 |
| CDY71084 | Canola | cytosol | 52.67 | 79.8 |
| Zm00001d046583_P001 | Maize | endoplasmic reticulum | 92.67 | 77.22 |
| Zm00001d014462_P002 | Maize | cytosol | 75.33 | 70.62 |
| KXG20642 | Sorghum | cytosol | 72.67 | 68.55 |
| Zm00001d052553_P001 | Maize | cytosol | 48.0 | 64.29 |
| Zm00001d036565_P002 | Maize | cytosol | 84.0 | 61.16 |
| Zm00001d000104_P001 | Maize | cytosol | 43.33 | 58.04 |
| Zm00001d036567_P002 | Maize | cytosol | 82.67 | 57.41 |
| HORVU6Hr1G085630.1 | Barley | cytosol, nucleus | 15.33 | 54.76 |
| HORVU1Hr1G076240.1 | Barley | endoplasmic reticulum, extracellular, vacuole | 20.0 | 42.86 |
| HORVU1Hr1G058980.1 | Barley | cytosol | 20.67 | 40.79 |
| HORVU7Hr1G091030.1 | Barley | cytosol | 20.0 | 39.47 |
| HORVU6Hr1G026350.1 | Barley | cytosol | 24.67 | 32.46 |
Protein Annotations
| MapMan:17.1.3.1.15 | Gene3D:3.30.420.80 | EntrezGene:824424 | ProteinID:AEE78965.1 | EMBL:AL353912 | ArrayExpress:AT3G52580 |
| EnsemblPlantsGene:AT3G52580 | RefSeq:AT3G52580 | TAIR:AT3G52580 | RefSeq:AT3G52580-TAIR-G | EnsemblPlants:AT3G52580.1 | TAIR:AT3G52580.1 |
| EMBL:AY057592 | EMBL:AY088848 | EMBL:AY124833 | Unigene:At.24693 | ProteinID:CAB43407.1 | GO:GO:0000028 |
| GO:GO:0000462 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003735 | GO:GO:0005198 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 |
| GO:GO:0005840 | GO:GO:0006139 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0016043 | GO:GO:0019538 | GO:GO:0022627 | GO:GO:0030529 | GO:GO:0048027 |
| GO:GO:0070181 | InterPro:IPR036967 | HAMAP:MF_01310 | RefSeq:NP_190826.1 | UniProt:P42036 | PFAM:PF00411 |
| PIRSF:PIRSF002131 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 |
| PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS00054 | PANTHER:PTHR11759 | PANTHER:PTHR11759:SF11 |
| InterPro:Ribosomal_S11 | InterPro:Ribosomal_S11_CS | InterPro:Ribosomal_S11_sf | SUPFAM:SSF53137 | UniParc:UPI0000132EE8 | EMBL:Z17690 |
| SEG:seg | : | : | : | : | : |
Description
RPS14C40S ribosomal protein S14-3 [Source:UniProtKB/Swiss-Prot;Acc:P42036]
Coordinates
chr3:+:19503153..19504973
Molecular Weight (calculated)
16238.7 Da
IEP (calculated)
11.300
GRAVY (calculated)
-0.487
Length
150 amino acids
Sequence
(BLAST)
(BLAST)
001: MSKRKTKEPK VENVTLGPAV REGEQVFGVV HVFASFNDTF IHVTDLSGRE TLVRITGGMK VKADRDESSP YAAMLAAQDV AQRCKELGIT AIHVKLRATG
101: GNKTKTPGPG AQSALRALAR SGMKIGRIED VTPIPTDSTR RKGGRRGRRL
101: GNKTKTPGPG AQSALRALAR SGMKIGRIED VTPIPTDSTR RKGGRRGRRL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.