Factsheet for Zm00001d000104_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d052553_P001	Maize	cytosol	59.82	59.82
HORVU1Hr1G076240.1	Barley	endoplasmic reticulum, extracellular, vacuole	27.68	44.29
KRH68612	Soybean	cytosol	58.93	44.0
KRH21050	Soybean	cytosol	58.93	44.0
KRG96883	Soybean	endoplasmic reticulum, nucleus	58.93	44.0
KRG96881	Soybean	cytosol	58.93	44.0
AT3G11510.1	Thale cress	cytosol	58.04	43.33
Solyc10g083280.1.1	Tomato	extracellular, nucleus	58.04	43.33
Solyc09g010100.2.1	Tomato	cytosol	58.04	43.33
Solyc02g070570.2.1	Tomato	nucleus	58.04	43.33
PGSC0003DMT400072364	Potato	cytosol	58.04	43.33
PGSC0003DMT400054512	Potato	cytosol	58.04	43.33
PGSC0003DMT400022864	Potato	cytosol	58.04	43.33
KRH11201	Soybean	nucleus	58.04	43.33
AT3G52580.1	Thale cress	cytosol	58.04	43.33
AT2G36160.1	Thale cress	cytosol	58.04	43.33
Bra001406.1-P	Field mustard	cytosol	58.04	43.33
Bra005296.1-P	Field mustard	cytosol	58.04	43.33
Bra009165.1-P	Field mustard	cytosol	58.04	43.33
Bra023052.1-P	Field mustard	cytosol	58.04	43.33
Bra034833.1-P	Field mustard	cytosol	58.04	43.33
Zm00001d000120_P003	Maize	mitochondrion	60.71	40.96
Bra002045.1-P	Field mustard	cytosol	58.04	40.12
KRH68609	Soybean	cytosol	58.93	39.76
HORVU1Hr1G058980.1	Barley	cytosol	26.79	39.47
Zm00001d036568_P001	Maize	cytosol, mitochondrion	59.82	39.18
Zm00001d014462_P002	Maize	cytosol	55.36	38.75
HORVU7Hr1G091030.1	Barley	cytosol	25.89	38.16
VIT_17s0000g10380.t01	Wine grape	cytosol	38.39	37.72
Zm00001d046583_P001	Maize	endoplasmic reticulum	59.82	37.22
Zm00001d036565_P002	Maize	cytosol	60.71	33.01
Zm00001d036567_P002	Maize	cytosol	60.71	31.48
VIT_11s0103g00410.t01	Wine grape	cytosol	25.89	29.29
VIT_17s0000g10400.t01	Wine grape	nucleus	8.93	15.38
CDY26068	Canola	extracellular	3.57	10.0

Protein Annotations

MapMan:35.1	UniProt:A0A1X7YEX2	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	PFAM:PF00411	PIRSF:PIRSF002131
PANTHER:PTHR11759	PANTHER:PTHR11759:SF11	InterPro:Ribosomal_S11	SUPFAM:SSF53137	UniParc:UPI000842928F	EnsemblPlantsGene:Zm00001d000104
EnsemblPlants:Zm00001d000104_P001	EnsemblPlants:Zm00001d000104_T001	SEG:seg	:	:	:

Description

40S ribosomal protein S14-3

Coordinates

chrB73V4_ctg91:-:664683..665212

Molecular Weight (calculated)

11926.7 Da

IEP (calculated)

10.890

GRAVY (calculated)

-0.211

Length

112 amino acids

Sequence
(BLAST)

001: MKVKADRDES SPYAAMLASQ DVAQRCKELG ITALHINSVF GLMVWLIHRG LAPDGVVRMT PKAVQPANQT CRKLCATGGN KTKTPGPGAQ SALRALARSG
101: MKIGRIGKHA DM

Best Arabidopsis Sequence Match ( AT3G52580.1 )
(BLAST)

001: MSKRKTKEPK VENVTLGPAV REGEQVFGVV HVFASFNDTF IHVTDLSGRE TLVRITGGMK VKADRDESSP YAAMLAAQDV AQRCKELGIT AIHVKLRATG
101: GNKTKTPGPG AQSALRALAR SGMKIGRIED VTPIPTDSTR RKGGRRGRRL

Arabidopsis Description

RPS14C40S ribosomal protein S14-3 [Source:UniProtKB/Swiss-Prot;Acc:P42036]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.