Factsheet for TraesCS6A01G137300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G126300.1	Wheat	cytosol	100.0	100.0
TraesCS6B01G165600.1	Wheat	cytosol	99.33	98.03
HORVU7Hr1G104220.3	Barley	cytosol, plasma membrane	98.67	98.01
Os02t0162500-01	Rice	nucleus, plasma membrane	97.33	97.33
EER88707	Sorghum	cytosol	96.67	96.67
EER88715	Sorghum	cytosol	96.67	96.67
EES12290	Sorghum	cytosol	96.67	96.67
TraesCS2A01G295600.1	Wheat	cytosol	95.33	94.7
AT3G52580.1	Thale cress	cytosol	94.0	94.0
KRG96883	Soybean	endoplasmic reticulum, nucleus	93.33	93.33
PGSC0003DMT400072364	Potato	cytosol	93.33	93.33
PGSC0003DMT400022864	Potato	cytosol	93.33	93.33
KRH68612	Soybean	cytosol	93.33	93.33
KRH21050	Soybean	cytosol	93.33	93.33
KRG96881	Soybean	cytosol	93.33	93.33
KRH11201	Soybean	nucleus	92.67	92.67
Solyc10g083280.1.1	Tomato	extracellular, nucleus	92.67	92.67
Bra034833.1-P	Field mustard	cytosol	92.67	92.67
Solyc09g010100.2.1	Tomato	cytosol	92.67	92.67
Bra023052.1-P	Field mustard	cytosol	92.67	92.67
Bra009165.1-P	Field mustard	cytosol	92.67	92.67
PGSC0003DMT400054512	Potato	cytosol	92.67	92.67
Bra005296.1-P	Field mustard	cytosol	92.67	92.67
Solyc02g070570.2.1	Tomato	nucleus	92.67	92.67
AT3G11510.1	Thale cress	cytosol	92.0	92.0
Bra001406.1-P	Field mustard	cytosol	92.0	92.0
AT2G36160.1	Thale cress	cytosol	91.33	91.33
Bra002045.1-P	Field mustard	cytosol	92.67	85.8
KRH68609	Soybean	cytosol	93.33	84.34
Zm00001d036568_P001	Maize	cytosol, mitochondrion	94.67	83.04
Zm00001d046583_P001	Maize	endoplasmic reticulum	95.33	79.44
Zm00001d014462_P002	Maize	cytosol	78.0	73.12
KXG20642	Sorghum	cytosol	74.67	70.44
VIT_06s0080g00740.t01	Wine grape	cytosol	80.67	66.12
Zm00001d036565_P002	Maize	cytosol	86.0	62.62
Zm00001d036567_P002	Maize	cytosol	84.67	58.8

Protein Annotations

MapMan:17.1.3.1.15	Gene3D:3.30.420.80	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	InterPro:IPR036967	HAMAP:MF_01310
PFAM:PF00411	PIRSF:PIRSF002131	ScanProsite:PS00054	PANTHER:PTHR11759	PANTHER:PTHR11759:SF11	InterPro:Ribosomal_S11
InterPro:Ribosomal_S11_CS	InterPro:Ribosomal_S11_sf	SUPFAM:SSF53137	EnsemblPlantsGene:TraesCS6A01G137300	EnsemblPlants:TraesCS6A01G137300.1	SEG:seg

Description

No Description!

Coordinates

chr6A:-:108202514..108204400

Molecular Weight (calculated)

16266.6 Da

IEP (calculated)

11.257

GRAVY (calculated)

-0.559

Length

150 amino acids

Sequence
(BLAST)

001: MSKRKTREPK EENVTLGPAV REGEHVFGVA HVFASFNDTF IHVTDLSGRE TLVRITGGMK VKADRDESSP YAAMLASQDV ATRCKELGIT ALHIKLRATG
101: GNKTKTPGPG AQSALRALAR SGMKIGRIED VTPVPTDSTR RKGGRRGRRL

Best Arabidopsis Sequence Match ( AT3G52580.1 )
(BLAST)

001: MSKRKTKEPK VENVTLGPAV REGEQVFGVV HVFASFNDTF IHVTDLSGRE TLVRITGGMK VKADRDESSP YAAMLAAQDV AQRCKELGIT AIHVKLRATG
101: GNKTKTPGPG AQSALRALAR SGMKIGRIED VTPIPTDSTR RKGGRRGRRL

Arabidopsis Description

RPS14C40S ribosomal protein S14-3 [Source:UniProtKB/Swiss-Prot;Acc:P42036]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.