Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os02t0162500-01 | Rice | nucleus, plasma membrane | 67.21 | 82.0 |
| HORVU7Hr1G104220.3 | Barley | cytosol, plasma membrane | 67.21 | 81.46 |
| TraesCS7B01G355300.1 | Wheat | cytosol, golgi, nucleus, plastid, unclear | 67.21 | 81.46 |
| TraesCS6A01G137300.1 | Wheat | cytosol | 66.12 | 80.67 |
| TraesCS6D01G126300.1 | Wheat | cytosol | 66.12 | 80.67 |
| VIT_08s0007g03020.t01 | Wine grape | cytosol | 69.95 | 78.53 |
| KXG20642 | Sorghum | cytosol | 63.39 | 72.96 |
| Zm00001d036565_P002 | Maize | cytosol | 73.22 | 65.05 |
| Zm00001d036567_P002 | Maize | cytosol | 73.22 | 62.04 |
| VIT_17s0000g10380.t01 | Wine grape | cytosol | 31.69 | 50.88 |
| VIT_11s0103g00410.t01 | Wine grape | cytosol | 24.04 | 44.44 |
| VIT_17s0000g10400.t01 | Wine grape | nucleus | 6.01 | 16.92 |
Protein Annotations
| MapMan:17.1.3.1.15 | Gene3D:3.30.420.80 | ProteinID:CCB51641 | ProteinID:CCB51641.1 | UniProt:F6HHE5 | EMBL:FN595757 |
| GO:GO:0000028 | GO:GO:0000462 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003735 |
| GO:GO:0005198 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005829 | GO:GO:0005840 | GO:GO:0006139 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0019538 | GO:GO:0022627 | GO:GO:0048027 |
| GO:GO:0070181 | InterPro:IPR036967 | HAMAP:MF_01310 | PFAM:PF00411 | PANTHER:PTHR11759 | PANTHER:PTHR11759:SF19 |
| InterPro:Ribosomal_S11 | InterPro:Ribosomal_S11_sf | SUPFAM:SSF53137 | TIGR:TC56104 | UniParc:UPI0002107F7C | ArrayExpress:VIT_06s0080g00740 |
| EnsemblPlantsGene:VIT_06s0080g00740 | EnsemblPlants:VIT_06s0080g00740.t01 | RefSeq:XP_002274381 | RefSeq:XP_002274381.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr6:-:20727685..20731049
Molecular Weight (calculated)
20124.2 Da
IEP (calculated)
8.340
GRAVY (calculated)
-0.214
Length
183 amino acids
Sequence
(BLAST)
(BLAST)
001: MFSSRRKVRE PKEENVTLGP TVRDGEHVFG VAHIFASFND TFIHVTDLSG RETLVRITGG MKVKADRDES SPYAAMLAAQ DVSQRCKELG VTALHIKLRA
101: TGGNKTKTPG PGAQSALRAL ARSGMRIGRI GGRMLPQSPL TALEERVEEE GEDCELALII SSNYPCIWVF CFLWWFLEAS AGK
101: TGGNKTKTPG PGAQSALRAL ARSGMRIGRI GGRMLPQSPL TALEERVEEE GEDCELALII SSNYPCIWVF CFLWWFLEAS AGK
001: MSKRKTKEPK VENVTLGPAV REGEQVFGVV HVFASFNDTF IHVTDLSGRE TLVRITGGMK VKADRDESSP YAAMLAAQDV AQRCKELGIT AIHVKLRATG
101: GNKTKTPGPG AQSALRALAR SGMKIGRIED VTPIPTDSTR RKGGRRGRRL
101: GNKTKTPGPG AQSALRALAR SGMKIGRIED VTPIPTDSTR RKGGRRGRRL
Arabidopsis Description
RPS14C40S ribosomal protein S14-3 [Source:UniProtKB/Swiss-Prot;Acc:P42036]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.