Factsheet for HORVU6Hr1G026350.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G085630.1	Barley	cytosol, nucleus	18.42	50.0
HORVU7Hr1G104220.3	Barley	cytosol, plasma membrane	35.09	26.49
HORVU2Hr1G073150.1	Barley	cytosol	35.09	26.49
KRH21050	Soybean	cytosol	33.33	25.33
KRH11201	Soybean	nucleus	33.33	25.33
Bra001406.1-P	Field mustard	cytosol	33.33	25.33
KRG96883	Soybean	endoplasmic reticulum, nucleus	33.33	25.33
KRG96881	Soybean	cytosol	33.33	25.33
KRH68612	Soybean	cytosol	33.33	25.33
PGSC0003DMT400072364	Potato	cytosol	32.46	24.67
PGSC0003DMT400022864	Potato	cytosol	32.46	24.67
PGSC0003DMT400054512	Potato	cytosol	32.46	24.67
Solyc02g070570.2.1	Tomato	nucleus	32.46	24.67
Bra034833.1-P	Field mustard	cytosol	32.46	24.67
Bra023052.1-P	Field mustard	cytosol	32.46	24.67
Bra009165.1-P	Field mustard	cytosol	32.46	24.67
Bra005296.1-P	Field mustard	cytosol	32.46	24.67
Solyc09g010100.2.1	Tomato	cytosol	32.46	24.67
AT3G52580.1	Thale cress	cytosol	32.46	24.67
Solyc10g083280.1.1	Tomato	extracellular, nucleus	32.46	24.67
AT3G11510.1	Thale cress	cytosol	30.7	23.33
KRH68609	Soybean	cytosol	33.33	22.89
Bra002045.1-P	Field mustard	cytosol	32.46	22.84
AT2G36160.1	Thale cress	cytosol	29.82	22.67
HORVU1Hr1G076240.1	Barley	endoplasmic reticulum, extracellular, vacuole	13.16	21.43
HORVU0Hr1G004130.1	Barley	plastid	35.09	21.39
HORVU7Hr1G091030.1	Barley	cytosol	12.28	18.42
HORVU1Hr1G058980.1	Barley	cytosol	12.28	18.42
VIT_17s0000g10380.t01	Wine grape	cytosol	12.28	12.28
VIT_11s0103g00410.t01	Wine grape	cytosol	10.53	12.12
VIT_17s0000g10400.t01	Wine grape	nucleus	2.63	4.62
CDY26068	Canola	extracellular	0.88	2.5

Protein Annotations

Gene3D:3.30.420.80	MapMan:35.2	UniProt:A0A287TN51	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:HORVU6Hr1G026350
EnsemblPlants:HORVU6Hr1G026350.1	InterPro:IPR036967	PFAM:PF00411	PANTHER:PTHR11759	PANTHER:PTHR11759:SF11	InterPro:Ribosomal_S11
InterPro:Ribosomal_S11_sf	UniParc:UPI000B4739FD	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr6H:+:98997671..98998286

Molecular Weight (calculated)

12425.7 Da

IEP (calculated)

6.907

GRAVY (calculated)

-0.286

Length

114 amino acids

Sequence
(BLAST)

001: TREPKEENVT LGPAVREGEH VWELLISLHH SMTHSSTSLT CPGERPLFVS LVCSAVKTDR DESSPYAAML ASQDVATRCK DSDIISASAS RSLASLLCTL
101: SSVPLCRRRD PRSN

Best Arabidopsis Sequence Match ( AT3G52580.1 )
(BLAST)

001: MSKRKTKEPK VENVTLGPAV REGEQVFGVV HVFASFNDTF IHVTDLSGRE TLVRITGGMK VKADRDESSP YAAMLAAQDV AQRCKELGIT AIHVKLRATG
101: GNKTKTPGPG AQSALRALAR SGMKIGRIED VTPIPTDSTR RKGGRRGRRL

Arabidopsis Description

RPS14C40S ribosomal protein S14-3 [Source:UniProtKB/Swiss-Prot;Acc:P42036]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.