Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra009165.1-P | Field mustard | cytosol | 93.12 | 99.33 |
| CDX84154 | Canola | cytosol | 93.12 | 97.39 |
| CDX84577 | Canola | cytosol | 93.12 | 97.39 |
| CDX75067 | Canola | cytosol | 93.75 | 95.54 |
| CDY08517 | Canola | cytosol | 93.75 | 93.75 |
| Solyc10g083280.1.1 | Tomato | extracellular, nucleus | 87.5 | 93.33 |
| Solyc09g010100.2.1 | Tomato | cytosol | 87.5 | 93.33 |
| KRH68612 | Soybean | cytosol | 86.88 | 92.67 |
| KRH21050 | Soybean | cytosol | 86.88 | 92.67 |
| PGSC0003DMT400072364 | Potato | cytosol | 86.88 | 92.67 |
| KRG96883 | Soybean | endoplasmic reticulum, nucleus | 86.88 | 92.67 |
| KRG96881 | Soybean | cytosol | 86.88 | 92.67 |
| PGSC0003DMT400022864 | Potato | cytosol | 86.88 | 92.67 |
| Solyc02g070570.2.1 | Tomato | nucleus | 86.25 | 92.0 |
| KRH11201 | Soybean | nucleus | 86.25 | 92.0 |
| PGSC0003DMT400054512 | Potato | cytosol | 86.25 | 92.0 |
| CDY60438 | Canola | cytosol | 93.75 | 90.36 |
| CDY01031 | Canola | cytosol | 93.75 | 89.82 |
| CDX73621 | Canola | cytosol | 92.5 | 86.05 |
| VIT_08s0007g03020.t01 | Wine grape | cytosol | 87.5 | 85.89 |
| CDY26067 | Canola | cytosol | 93.12 | 85.14 |
| KRH68609 | Soybean | cytosol | 86.88 | 83.73 |
| CDY71084 | Canola | cytosol | 50.62 | 81.82 |
| CDY00737 | Canola | cytosol | 93.75 | 70.75 |
| CDX73872 | Canola | cytosol | 93.75 | 70.75 |
| CDY71908 | Canola | plastid | 93.12 | 68.66 |
| CDY43745 | Canola | cytosol, plasma membrane | 93.75 | 61.22 |
| CDY26068 | Canola | extracellular | 2.5 | 10.0 |
Protein Annotations
| MapMan:17.1.3.1.15 | Gene3D:3.30.420.80 | GO:A0A078E9X4 | EnsemblPlants:CDX98905 | ProteinID:CDX98905 | ProteinID:CDX98905.1 |
| GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00107011001 | InterPro:IPR036967 | HAMAP:MF_01310 | PFAM:PF00411 |
| PIRSF:PIRSF002131 | ScanProsite:PS00054 | PANTHER:PTHR11759 | PANTHER:PTHR11759:SF11 | InterPro:Ribosomal_S11 | InterPro:Ribosomal_S11_CS |
| InterPro:Ribosomal_S11_sf | SUPFAM:SSF53137 | UniParc:UPI0004EEFDC3 | SEG:seg | : | : |
Description
BnaC09g49300D
Coordinates
chrLK031907:-:521399..522534
Molecular Weight (calculated)
17495.0 Da
IEP (calculated)
11.063
GRAVY (calculated)
-0.527
Length
160 amino acids
Sequence
(BLAST)
(BLAST)
001: MDTFLVDSSN WSRRKTREPK EETVTLGPAV RDGEQVFGVV HIFASFNDTF IHVTDLSGRE TLVRITGGMK VKADRDESSP YAAMLAAQDV AQRCKELGIT
101: AMHVKLRATG GNKTKTPGPG AQSALRALAR SGMKIGRIED VTPIPTDSTR RKGGRRGRRL
101: AMHVKLRATG GNKTKTPGPG AQSALRALAR SGMKIGRIED VTPIPTDSTR RKGGRRGRRL
001: MSKRKTKEPK VETVTLGPSV REGEQVFGVV HIFASFNDTF IHVTDLSGRE TLVRITGGMK VKADRDESSP YAAMLAAQDV AQRCKELGIT AMHVKLRATG
101: GNKTKTPGPG AQSALRALAR SGMKIGRIED VTPIPTDSTR RKGGRRGRRL
101: GNKTKTPGPG AQSALRALAR SGMKIGRIED VTPIPTDSTR RKGGRRGRRL
Arabidopsis Description
RPS14BAt3g11510 [Source:UniProtKB/TrEMBL;Acc:Q1H555]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.