CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX84154	Canola	cytosol	70.75	98.04
CDX84577	Canola	cytosol	70.28	97.39
AT3G11510.1	Thale cress	cytosol	68.4	96.67
CDX75067	Canola	cytosol	70.28	94.9
CDY08517	Canola	cytosol	71.23	94.38
Solyc09g010100.2.1	Tomato	cytosol	66.51	94.0
Solyc10g083280.1.1	Tomato	extracellular, nucleus	66.51	94.0
CDX98905	Canola	cytosol	70.75	93.75
PGSC0003DMT400072364	Potato	cytosol	66.04	93.33
KRG96881	Soybean	cytosol	66.04	93.33
KRG96883	Soybean	endoplasmic reticulum, nucleus	66.04	93.33
KRH21050	Soybean	cytosol	66.04	93.33
KRH68612	Soybean	cytosol	66.04	93.33
PGSC0003DMT400022864	Potato	cytosol	66.04	93.33
CDY01031	Canola	cytosol	73.11	92.81
Solyc02g070570.2.1	Tomato	nucleus	65.57	92.67
KRH11201	Soybean	nucleus	65.57	92.67
PGSC0003DMT400054512	Potato	cytosol	65.57	92.67
CDY60438	Canola	cytosol	71.23	90.96
CDX73872	Canola	cytosol	90.57	90.57
VIT_08s0007g03020.t01	Wine grape	cytosol	67.92	88.34
CDX73621	Canola	cytosol	71.23	87.79
CDY26067	Canola	cytosol	70.75	85.71
KRH68609	Soybean	cytosol	66.04	84.34
CDY71084	Canola	cytosol	38.21	81.82
CDY71908	Canola	plastid	75.0	73.27
CDY43745	Canola	cytosol, plasma membrane	71.7	62.04
CDY26068	Canola	extracellular	1.89	10.0

Protein Annotations

MapMan:17.1.3.1.15	Gene3D:3.30.420.80	GO:A0A078EHX9	EnsemblPlants:CDY00737	ProteinID:CDY00737	ProteinID:CDY00737.1
GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00110594001	InterPro:IPR036967	HAMAP:MF_01310	PFAM:PF00411
ScanProsite:PS00054	PANTHER:PTHR11759	PANTHER:PTHR11759:SF11	InterPro:Ribosomal_S11	InterPro:Ribosomal_S11_CS	InterPro:Ribosomal_S11_sf
SUPFAM:SSF53137	UniParc:UPI0004EDDFFE	SEG:seg	:	:	:

Description

BnaC03g37210D

Coordinates

chrLK031921:-:671987..673802

Molecular Weight (calculated)

23489.4 Da

IEP (calculated)

11.393

GRAVY (calculated)

-0.674

Length

212 amino acids

Sequence
(BLAST)

001: MRLQISPERM MPNDQNVVQD RPPKHQFETV LQENNIGLRP SVRRASHKPY SSKSSLSHPL VNMSRRKTRE PKEETVTLGP AVRDGEQVFG VVHIFASFND
101: TFIHVTDLSG RETLVRITGG MKVKADRDES SPYAAMLAAQ DVAQRCKELG ITAMHVKLRA TGGNKTKTPG PGAQSALRAL ARSGMKIGRI EDVTPIPTDS
201: TRRKGGRRGR RL

Best Arabidopsis Sequence Match ( AT3G11510.1 )
(BLAST)

001: MSKRKTKEPK VETVTLGPSV REGEQVFGVV HIFASFNDTF IHVTDLSGRE TLVRITGGMK VKADRDESSP YAAMLAAQDV AQRCKELGIT AMHVKLRATG
101: GNKTKTPGPG AQSALRALAR SGMKIGRIED VTPIPTDSTR RKGGRRGRRL

Arabidopsis Description

RPS14BAt3g11510 [Source:UniProtKB/TrEMBL;Acc:Q1H555]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.