Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH75634 | Soybean | nucleus | 83.62 | 22.84 |
| KRH74431 | Soybean | mitochondrion | 46.33 | 12.06 |
| VIT_07s0205g00030.t01 | Wine grape | nucleus | 43.5 | 11.74 |
| CDY37838 | Canola | plastid | 31.07 | 11.0 |
| Solyc02g091710.2.1 | Tomato | plastid | 43.5 | 10.72 |
| PGSC0003DMT400078676 | Potato | plastid | 42.37 | 10.55 |
| CDY25618 | Canola | nucleus, peroxisome, plastid | 35.03 | 9.37 |
| Bra030218.1-P | Field mustard | nucleus | 35.03 | 9.23 |
| AT2G22680.1 | Thale cress | cytosol, peroxisome, plastid | 35.59 | 9.22 |
| CDX72660 | Canola | cytosol, nucleus, peroxisome, plastid | 35.59 | 9.2 |
| CDY31616 | Canola | nucleus | 35.03 | 9.02 |
| CDX89500 | Canola | cytosol, peroxisome, plastid | 33.33 | 8.77 |
| OQU81040 | Sorghum | peroxisome | 35.03 | 8.67 |
| AT4G37890.1 | Thale cress | nucleus | 35.59 | 8.53 |
| KRH16916 | Soybean | nucleus | 32.2 | 8.46 |
| Os04t0101800-01 | Rice | cytosol, mitochondrion, peroxisome, plastid | 31.64 | 8.13 |
| Zm00001d024940_P001 | Maize | peroxisome | 33.33 | 8.01 |
| KRH72527 | Soybean | nucleus | 29.38 | 7.99 |
| Zm00001d004553_P001 | Maize | peroxisome | 33.33 | 7.87 |
| GSMUA_Achr4P22090_001 | Banana | nucleus | 31.64 | 7.83 |
| GSMUA_Achr4P20870_001 | Banana | cytosol, mitochondrion, nucleus, peroxisome | 32.2 | 7.79 |
| Bra031849.1-P | Field mustard | plastid | 31.07 | 7.77 |
| CDY52535 | Canola | plastid | 31.07 | 7.75 |
| AT5G65683.1 | Thale cress | peroxisome, plastid | 31.07 | 7.67 |
| TraesCS2A01G045100.1 | Wheat | peroxisome | 32.77 | 7.63 |
| CDY08765 | Canola | plastid | 30.51 | 7.63 |
| Bra024408.1-P | Field mustard | plastid | 30.51 | 7.63 |
| CDY45614 | Canola | plastid | 30.51 | 7.58 |
| GSMUA_Achr5P14740_001 | Banana | mitochondrion | 29.38 | 7.51 |
| TraesCS2B01G057300.1 | Wheat | peroxisome | 32.2 | 7.4 |
| TraesCS2D01G043700.1 | Wheat | peroxisome | 31.64 | 7.34 |
| Bra017859.1-P | Field mustard | plastid | 25.99 | 7.28 |
| GSMUA_Achr7P01890_001 | Banana | mitochondrion | 27.68 | 6.86 |
| KRH39527 | Soybean | extracellular, golgi | 20.34 | 6.65 |
| KRH51230 | Soybean | nucleus | 19.21 | 6.56 |
| KRH36665 | Soybean | nucleus | 19.21 | 6.18 |
| KRH11654 | Soybean | nucleus, plastid | 19.21 | 6.15 |
| KRH45468 | Soybean | cytosol, peroxisome | 0.0 | 0.0 |
Protein Annotations
| EMBL:ACUP02005231 | EnsemblPlants:KRH45469 | EnsemblPlantsGene:GLYMA_08G2734001 | Gene3D:3.30.40.10 | InterPro:IPR001841 | InterPro:IPR013083 |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR10579 | PANTHER:PTHR10579:SF59 | PFAM:PF17123 | PFscan:PS50089 |
| ProteinID:KRH45469 | ProteinID:KRH45469.1 | SEG:seg | SMART:SM00184 | SUPFAM:SSF57850 | UniParc:UPI0006EDE45E |
| UniProt:A0A0R0IT50 | MapMan:35.1 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr8:-:35948951..35949870
Molecular Weight (calculated)
19674.0 Da
IEP (calculated)
10.135
GRAVY (calculated)
-0.832
Length
177 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSGWRRTFR TSNTIPQNTQ EPENCNYCYD NNNINSSPKI TSTNFSSSIP TLHSRTNSPL SKHNNNNART PSPTKRNTPV SFHQSTPSSP NSPSTFSLLK
101: STLRLSKGSC EICMRSVKTG EGKAIFTAEC SHVFHFPCLA GHVKKHRMVT CPVCNANWKQ LQQNADENKG NAELKTT
101: STLRLSKGSC EICMRSVKTG EGKAIFTAEC SHVFHFPCLA GHVKKHRMVT CPVCNANWKQ LQQNADENKG NAELKTT
001: MGTGWRRAFC TTAPRNSDAA APDLDKQRTG YNLTPSPSPR SCVKLAFLSG GSNPSTPRST SSPSLRCRTA DAQTPTAEQT STPRSATKSP RLSLAAISNP
101: SSPRSPLKLS LFRNSFKFRS TCGICLNSVK TGQGTAKYTA ECSHAFHFPC IADYVRKQGK LVCPVCNSIW KDASLLVPHK NATESPLDDS VSVIQEKRVV
201: VTSSPRAKPR PKQSDYSRFY DDDEPLLSPR FVTIPEADEN CGGEEEDDVP QFKGFVVDPN PSFAVKTNEI PVNGRDFGNV QVSLLPEAAV VSVGCGYETR
301: AVALRVKAPP PLTARGGVGR RLLDPSQRAP VDLVVVVDVG GTMNGAKLQM VKRAMRLVIS SLGSADRLSI VAVVMTVPKR LLPLKRMTEH GKRSAGAVVD
401: GLLCGQGSNT SEALKKASRV LEDRRERNPV ASIVLLTDGQ GQLSKVHTNQ RSTITNVGST RFAHIEIPVT EHGFGESGGC SNAPAEEAFA KCIGGLLSVV
501: VQDLRIQIRV GSGSGPCEIS AIYLCNGRPT LVSSGSGSVR LGDLYAGEER ELLVELRVPS TATRAYQILS VRGLFKDPST QEVVYGRDQS LRVPQAVRSS
601: SSPRIERLRS LFIATRAVAE SRRLVEYGEC TSAYHLLTSA RALLGQSGTV EAAEYIKVVE AELVEVQWRG QQLMEYQSQH QQQHNQRRRG SERETTTTMT
701: LMDENGEPLT PASAWRAAEK LAKLAMMKKS DLHGFENARF
101: SSPRSPLKLS LFRNSFKFRS TCGICLNSVK TGQGTAKYTA ECSHAFHFPC IADYVRKQGK LVCPVCNSIW KDASLLVPHK NATESPLDDS VSVIQEKRVV
201: VTSSPRAKPR PKQSDYSRFY DDDEPLLSPR FVTIPEADEN CGGEEEDDVP QFKGFVVDPN PSFAVKTNEI PVNGRDFGNV QVSLLPEAAV VSVGCGYETR
301: AVALRVKAPP PLTARGGVGR RLLDPSQRAP VDLVVVVDVG GTMNGAKLQM VKRAMRLVIS SLGSADRLSI VAVVMTVPKR LLPLKRMTEH GKRSAGAVVD
401: GLLCGQGSNT SEALKKASRV LEDRRERNPV ASIVLLTDGQ GQLSKVHTNQ RSTITNVGST RFAHIEIPVT EHGFGESGGC SNAPAEEAFA KCIGGLLSVV
501: VQDLRIQIRV GSGSGPCEIS AIYLCNGRPT LVSSGSGSVR LGDLYAGEER ELLVELRVPS TATRAYQILS VRGLFKDPST QEVVYGRDQS LRVPQAVRSS
601: SSPRIERLRS LFIATRAVAE SRRLVEYGEC TSAYHLLTSA RALLGQSGTV EAAEYIKVVE AELVEVQWRG QQLMEYQSQH QQQHNQRRRG SERETTTTMT
701: LMDENGEPLT PASAWRAAEK LAKLAMMKKS DLHGFENARF
Arabidopsis Description
WAV3E3 ubiquitin-protein ligase WAV3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTA6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.