CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 3
nucleus 4
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH36665	Soybean	nucleus	94.39	94.91
KRH51230	Soybean	nucleus	71.43	76.25
VIT_00s0475g00020.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	62.39	66.6
PGSC0003DMT400070011	Potato	nucleus	56.24	58.68
Solyc04g015280.2.1	Tomato	cytosol, nucleus, plastid	56.06	58.27
Bra024913.1-P	Field mustard	mitochondrion	48.82	51.72
TraesCS5A01G178300.1	Wheat	mitochondrion	49.19	51.61
TraesCS5B01G176000.2	Wheat	mitochondrion	48.82	51.23
Zm00001d020013_P001	Maize	cytosol	48.46	50.95
Os09t0298500-01	Rice	nucleus	49.01	50.94
CDY17702	Canola	mitochondrion	35.44	50.91
GSMUA_Achr9P22360_001	Banana	plastid	36.35	49.63
TraesCS5D01G182800.1	Wheat	cytosol, plastid	49.19	47.89
CDX77800	Canola	nucleus	48.1	46.83
OQU89212	Sorghum	cytosol	46.65	46.15
KRH45469	Soybean	nucleus	6.15	19.21
KRH16916	Soybean	nucleus	22.42	18.4
KRH39527	Soybean	extracellular, golgi	17.9	18.3
KRH72527	Soybean	nucleus	20.98	17.82
KRH74431	Soybean	mitochondrion	21.88	17.79
KRH75634	Soybean	nucleus	20.43	17.44
KRH45468	Soybean	cytosol, peroxisome	12.12	16.63

Protein Annotations

EntrezGene:100785882	Gene3D:3.30.40.10	Gene3D:3.40.50.410	MapMan:35.1	EMBL:ACUP02009231	ncoils:Coil
EnsemblPlantsGene:GLYMA_15G122900	InterPro:IPR001841	InterPro:IPR002035	InterPro:IPR013083	InterPro:IPR036465	UniProt:K7MAY6
EnsemblPlants:KRH11654	ProteinID:KRH11654	ProteinID:KRH11654.1	PFAM:PF13519	PFAM:PF13639	PFscan:PS50089
PANTHER:PTHR10579	PANTHER:PTHR10579:SF47	SMART:SM00184	SUPFAM:SSF53300	SUPFAM:SSF57850	UniParc:UPI000233B73F
InterPro:VWF_A	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	SEG:seg	InterPro:vWFA_dom_sf	:

Description

hypothetical protein

Coordinates

chr15:+:9757039..9761620

Molecular Weight (calculated)

61173.9 Da

IEP (calculated)

8.055

GRAVY (calculated)

-0.305

Length

553 amino acids

Sequence
(BLAST)

001: MGEGRRRGTS KLREAARKVA VAAAYACGSF SRRKALLDPV SIDTSCSLSA TASNSSFVSP STTKNSSEEV MEETYSCITT NINNELQSKN LCAICLDPLS
101: YQSKGSSPGQ AIFTAQCSHA FHFACISSNV RHGSVTCPIC RAHWTQLPRN LNNNLGPFTS SNQSDPILRI LDDSIATFRV HRRSLLRSAR YDDDDPVEPD
201: ETHESPKLGF SLVPIPPNAP TGYHPALQVT KHASCPCHLS LHPLSCSSSS LLQSPPMQTP YIMCPSSNRA YLSVKLTHER ATDLVLVASP NGPHLRLLKQ
301: AMALVVFSLR HIDRLAIVTY SSAAARVFPL RRMTSYGKRT ALQVIDRLFY MGQSDPVEGL KKGIKILEDR VHKNPESCIL HLSDNPTRPY HAVSMELPST
401: PIHRFHVGFG FGTSSGFVIQ EFEEFLAKML GGIVREIQLR ICGAGEEVGS GRVIRIGEIR GGKERRILLD LGDFTHVYVE YSYIEGEIDE CVRRTGETVV
501: GVGEHKDDVL ENGEETVRDM NTGGGRSSSV ESWDFHDPYM ARRWAKHLHG YRL

Best Arabidopsis Sequence Match ( AT3G54780.1 )
(BLAST)

001: MVSKWKKMKL ALSLNLCNYL PRTLEEEPPS LALNSAETLS DAALLSPLNW PMTPTPSSYR RRLSRSSSKS SKTCSICLNK MKEGCGHAIF TAECSHMFHF
101: HCIASNVKHG NQVCPVCRAK WKEIPIQKPS LDLPYYPFDR CNNDAAISLF RCLPPSQRAI TQGHPEPATF DDDERLEEQI VFDGETEVLK KENRDYVRMM
201: DMKVYPEVSA VPQSKSCENF DVLVHLKAVT GDQISQYRRA PIDLVTVLDI SGSMGGTKLA LLKRAMGFVI QNLGSSDRLS VIAFSSTARR LFPLTRMSDA
301: GRQLALQAVN SLVANGGTNI VDGLRKGAKV MEDRLERNSV ASIILLSDGR DTYTTNHPDP SYKVMLPQIS VHSFGFGSDH DASVMHSVSE VSGGTFSFIE
401: SESVIQDALA QCIGGLLSVA VQELRVEIEG VSPNVRLSSI KAGSYSSLVT GDGHSGLVDL GDLYADEERD FLVSINIPVE EDGHTPLLKL RCLYINPLTK
501: EITTLESHVL QIRRPEYVAE EKVVPIEVVR QRNRFLAAEA MAQARTLAEH GDLEAAVKAI ENFRLVLAET VAAKSCDRFC VALDSELKEM QGRMRSSHMY
601: EASGRAYILS GLSSHSWQRA TARGNSRDSS SFVQAYQTPS MAEMLRRSQA MFLVSPSHHR LIQPLLSFAS QPKPR

Arabidopsis Description

Zinc finger (C3HC4-type RING finger) family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LN98]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.