CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	peroxisome
PProwler:	mitochondrion
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG88877
KRG92440
KRG97263
KRG97647
KRG97711
KRG98973
KRG99305
KRH00851
KRH01966
KRH03247
KRH03966
KRH04275
KRH06335
KRH11576
KRH14870
KRH14933
KRH25249
KRH28216
KRH30315
KRH30413
KRH31163
KRH31225
KRH34357
KRH36588
KRH40381
KRH47754
KRH51187
KRH54345
KRH57111
KRH57236
KRH57556
KRH63594
KRH66641
KRH68981
KRH71094
KRH72403
KRH73205
KRH73215
KRH75261
KRH75571
KRH77271

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G65683.1	KRG88877	AT1G01050.1	21798944
AT5G65683.1	KRG97263	AT1G01050.1	21798944
AT5G65683.1	KRG98973	AT1G01050.1	21798944
AT5G65683.1	KRG99305	AT1G01050.1	21798944
AT5G65683.1	KRH06335	AT1G01050.1	21798944
AT5G65683.1	KRH47754	AT1G01050.1	21798944
AT5G65683.1	KRH68981	AT1G01050.1	21798944
AT5G65683.1	KRH72403	AT1G01050.1	21798944
AT5G65683.1	KRH00851	AT1G01510.1	21798944
AT5G65683.1	KRH40381	AT1G01510.1	21798944
AT5G65683.1	KRH30315	AT2G44950.1	21798944
AT5G65683.1	KRH75261	AT2G44950.1	21798944
AT5G65683.1	KRH25249	AT3G03000.1	21798944
AT5G65683.1	KRH30413	AT3G03000.1	21798944
AT5G65683.1	KRG97711	AT3G08530.1	21798944
AT5G65683.1	KRH14933	AT3G08530.1	21798944
AT5G65683.1	KRH31163	AT3G08530.1	21798944
AT5G65683.1	KRH73205	AT3G08530.1	21798944
AT5G65683.1	KRG92440	AT3G22960.1	21798944
AT5G65683.1	KRH34357	AT3G22960.1	21798944
AT5G65683.1	KRH71094	AT3G24140.1	21798944
AT5G65683.1	KRH75571	AT3G24140.1	21798944
AT5G65683.1	KRH03966	AT3G48550.1	21798944
AT5G65683.1	KRH57236	AT3G48550.1	21798944
AT5G65683.1	KRH03247	AT3G54170.1	21798944
AT5G65683.1	KRH54345	AT3G54170.1	21798944
AT5G65683.1	KRH57111	AT3G54170.1	21798944
AT5G65683.1	KRH63594	AT3G54170.1	21798944
AT5G65683.1	KRG97647	AT3G56270.1	21798944
AT5G65683.1	KRH14870	AT3G56270.1	21798944
AT5G65683.1	KRH31225	AT3G56270.1	21798944
AT5G65683.1	KRH73215	AT3G56270.1	21798944
AT5G65683.1	KRH01966	AT4G17220.1	21798944
AT5G65683.1	KRH11576	AT4G17220.1	21798944
AT5G65683.1	KRH36588	AT4G17220.1	21798944
AT5G65683.1	KRH51187	AT4G17220.1	21798944
AT5G65683.1	KRH04275	AT4G17680.1	21798944
AT5G65683.1	KRH28216	AT4G17680.1	21798944
AT5G65683.1	KRH57556	AT4G17680.1	21798944
AT5G65683.1	KRH77271	AT4G17680.1	21798944
AT5G65683.1	KRH66641	AT5G43280.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH75634	Soybean	nucleus	83.62	52.01
KRH39527	Soybean	extracellular, golgi	50.12	37.34
KRH74431	Soybean	mitochondrion	54.84	32.5
VIT_07s0205g00030.t01	Wine grape	nucleus	50.37	30.95
Bra017859.1-P	Field mustard	plastid	47.15	30.06
KRH72527	Soybean	nucleus	47.89	29.65
CDY25618	Canola	nucleus, peroxisome, plastid	47.39	28.85
Bra030218.1-P	Field mustard	nucleus	47.39	28.42
CDX72660	Canola	cytosol, nucleus, peroxisome, plastid	48.14	28.32
CDX89500	Canola	cytosol, peroxisome, plastid	47.15	28.23
KRH16916	Soybean	nucleus	47.15	28.19
PGSC0003DMT400078676	Potato	plastid	49.38	27.99
CDY31616	Canola	nucleus	47.64	27.95
Solyc02g091710.2.1	Tomato	plastid	49.13	27.58
AT2G22680.1	Thale cress	cytosol, peroxisome, plastid	46.15	27.23
AT4G37890.1	Thale cress	nucleus	49.88	27.2
CDY52535	Canola	plastid	46.15	26.2
CDY08765	Canola	plastid	45.41	25.85
Bra024408.1-P	Field mustard	plastid	45.41	25.85
Bra031849.1-P	Field mustard	plastid	44.91	25.57
Os04t0101800-01	Rice	cytosol, mitochondrion, peroxisome, plastid	43.42	25.4
AT5G65683.1	Thale cress	peroxisome, plastid	44.66	25.1
CDY45614	Canola	plastid	44.17	25.0
GSMUA_Achr7P01890_001	Banana	mitochondrion	43.42	24.51
GSMUA_Achr4P22090_001	Banana	nucleus	43.18	24.34
TraesCS2D01G043700.1	Wheat	peroxisome	44.66	23.59
GSMUA_Achr5P14740_001	Banana	mitochondrion	40.45	23.55
TraesCS2A01G045100.1	Wheat	peroxisome	44.42	23.55
GSMUA_Achr4P20870_001	Banana	cytosol, mitochondrion, nucleus, peroxisome	42.43	23.36
Zm00001d024940_P001	Maize	peroxisome	42.43	23.2
TraesCS2B01G057300.1	Wheat	peroxisome	44.17	23.12
Zm00001d004553_P001	Maize	peroxisome	42.93	23.07
OQU81040	Sorghum	peroxisome	34.74	19.58
CDY37838	Canola	plastid	18.11	14.6
KRH36665	Soybean	nucleus	16.87	12.36
KRH51230	Soybean	nucleus	15.88	12.36
KRH11654	Soybean	nucleus, plastid	16.63	12.12
KRH45469	Soybean	nucleus	0.0	0.0

Protein Annotations

EMBL:ACUP02005230	EnsemblPlants:KRH45468	EnsemblPlantsGene:GLYMA_08G2734002	Gene3D:3.40.50.410	InterPro:IPR002035	InterPro:IPR036465
InterPro:VWF_A	InterPro:vWFA_dom_sf	PANTHER:PTHR10579	PANTHER:PTHR10579:SF59	PFAM:PF00092	PFscan:PS50234
ProteinID:KRH45468	ProteinID:KRH45468.1	SEG:seg	SMART:SM00327	SUPFAM:SSF53300	UniParc:UPI0006EE07A3
UniProt:A0A0R0ITE2	MapMan:26.3.1.6	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:35946897..35948825

Molecular Weight (calculated)

44664.4 Da

IEP (calculated)

10.471

GRAVY (calculated)

-0.435

Length

403 amino acids

Sequence
(BLAST)

001: SETYVAVLNV KSQPRNAAAN RPPADLVAVI DVGGSVSGEE YRMLKRSMQV VISSLGSADR LSVVAFSGGS KRLFPLRRMT GRGQMAARRV VDALSTVELR
101: RDGTAARNNA LKKAARVLED RRQKNTVAKI ILLTNSHEDQ RLSSTRFDIH SLRYSYDGAC NHAQHDHELA KRVGNLLSVA AQDFKLELKL TSRSAPAEIS
201: AVYSLAKGCT DALSPESVAL GDLYAAEGRE ILVELKVPAG TASRGSHQRV ISVRCSHRDP FTRELVISKD RELNVPRPRT VRSCDPRIER LRRCQVSARA
301: VAESRRLMAR NDVSGALELL SSARASVSRE QGDECLRWLE SEQAELRSQK LRSSCNNNCF DEKGEPLTPM SAWRVAERLA KVAIMRKSMN RVSDLHGFED
401: ARF

Best Arabidopsis Sequence Match ( AT2G22680.1 )
(BLAST)

001: MLNGWRRAFC TSIPKETNQN DVDDDGLVGL RHKSTSRFGF FSTPSTPRSD SGTGTYSLRC RTSTATAVST TSSLPGTPKL KCKTTTTGET TPRNRSLVSL
101: LTPSSSSISP ASFTLLKSKL RFKQSSSNKC GICLQSVKSG QGTAIFTAEC SHTFHFPCVT SRAAANHNRL ASCPVCGSSL LPEIRNYAKP ESQIKPEIKN
201: KSLRVYNDDE ALISSPISPA GFHTILESDE NEDCEEFTGF SVNTPSPLTA KLLTDRNVDV KLSPESAIVA SGKGYETYSV VMKVKSPPFP TARGFARRVP
301: VDLVAVLDVS GRNSGGKLEM LKQTMRIVLS NLREMDRLSI IAFSSSSKRL SPLRRMTANG RRSARRIVDI ITVPGSVSGV GIDFSGEGMS VNDALKKAVK
401: VLDDRRQKNP FTAVFVLTDR QAHQVAQLAH SRIPIHTIWL SHAIPEDAFA RTINGYLSLS VQDLGLQLGI VSGLGQGEIT SVYSLSGRPA WLGTGSIRLG
501: DMYAEEERAL LVEIKSPVNN SLTGSRSHKI MTVRSRYVDP TTQELRNPED RALLIPTPLT VRSSSNPNIS RLRNLHVSTR AVAESRRLIE RNHYSGAHRL
601: LTSARALLVQ HGLSSSDACI RGLDAEIADL NSVKGRHVAA SESLESLTPT SAWKAAERLA KVAMVRKHMN RVSDLHGFEN ARF

Arabidopsis Description

WAVH1E3 ubiquitin-protein ligase WAVH1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQ46]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.