Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 2
- plastid 3
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| nucleus:
21132161
nucleus: 24385303 endoplasmic reticulum: 27224218 endoplasmic reticulum: 28499913 mitochondrion: 28499913 |
msms PMID:
21132161
doi
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
msms PMID:
24385303
doi
National Institute of Crop Science, National Agriculture and Food Research Organization, Kannondai 2-1-18, Tsukuba, 305-8518, Japan, skomatsu@affrc.go.jp.
msms PMID:
28499913
doi
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH31163 | Soybean | endoplasmic reticulum | 99.12 | 99.12 |
| KRH14933 | Soybean | nucleus | 96.88 | 96.88 |
| KRH73205 | Soybean | nucleus | 97.06 | 96.66 |
| Solyc06g051310.2.1 | Tomato | nucleus | 94.0 | 93.94 |
| Solyc05g052510.2.1 | Tomato | nucleus, plastid | 93.47 | 93.14 |
| Solyc03g096000.2.1 | Tomato | nucleus | 93.12 | 93.01 |
| AT3G11130.1 | Thale cress | cytosol, plasma membrane | 92.41 | 92.14 |
| CDY36318 | Canola | cytosol | 39.88 | 92.12 |
| KRH76885 | Soybean | endoplasmic reticulum | 92.18 | 92.07 |
| KRH28591 | Soybean | endoplasmic reticulum | 92.18 | 92.07 |
| AT3G08530.1 | Thale cress | cytosol, plasma membrane, plastid | 91.94 | 91.78 |
| CDY36301 | Canola | cytosol | 90.47 | 91.55 |
| CDY00724 | Canola | cytosol | 90.35 | 91.43 |
| KRH17059 | Soybean | endoplasmic reticulum, nucleus | 91.59 | 91.43 |
| EES07849 | Sorghum | plastid | 91.88 | 91.4 |
| KRH72708 | Soybean | endoplasmic reticulum, mitochondrion | 91.71 | 91.38 |
| CDY07954 | Canola | cytosol | 90.0 | 91.34 |
| CDX73889 | Canola | cytosol | 90.41 | 91.33 |
| KXG22761 | Sorghum | plastid | 91.82 | 91.29 |
| Bra034166.1-P | Field mustard | cytosol | 77.65 | 91.16 |
| Bra034864.1-P | Field mustard | cytosol | 79.71 | 91.06 |
| CDX74011 | Canola | cytosol | 89.88 | 91.06 |
| CDY00997 | Canola | extracellular | 91.41 | 91.04 |
| TraesCS5D01G158800.1 | Wheat | plastid | 91.0 | 90.57 |
| TraesCS5B01G152300.1 | Wheat | unclear | 91.0 | 90.57 |
| TraesCS5A01G153500.1 | Wheat | golgi, unclear | 90.94 | 90.52 |
| TraesCS4A01G182300.1 | Wheat | extracellular, golgi | 91.12 | 90.32 |
| TraesCS4D01G130900.1 | Wheat | golgi, unclear | 91.06 | 90.26 |
| CDY08549 | Canola | cytosol | 81.94 | 90.16 |
| CDY22158 | Canola | cytosol | 10.06 | 90.0 |
| Bra001286.1-P | Field mustard | cytosol | 78.24 | 89.62 |
| TraesCS4B01G136100.2 | Wheat | golgi, unclear | 90.94 | 89.26 |
| Os11t0104900-00 | Rice | plasma membrane | 36.59 | 88.98 |
| Bra001391.1-P | Field mustard | cytosol | 75.71 | 88.64 |
| Os12t0104766-00 | Rice | plasma membrane | 30.06 | 88.41 |
| Os11t0104866-00 | Rice | plasma membrane | 29.94 | 88.06 |
| KRH12961 | Soybean | cytosol | 4.94 | 87.5 |
| HORVU4Hr1G024710.4 | Barley | plastid | 90.94 | 86.81 |
| HORVU5Hr1G048010.1 | Barley | plastid | 90.65 | 85.47 |
| CDY27997 | Canola | cytosol | 80.35 | 85.38 |
| CDY35984 | Canola | cytosol | 80.12 | 84.81 |
| Bra029698.1-P | Field mustard | cytosol | 73.71 | 84.72 |
| CDY36317 | Canola | cytosol | 12.59 | 84.58 |
| KRH25762 | Soybean | cytosol | 4.76 | 84.38 |
| CDY22157 | Canola | cytosol | 3.53 | 76.92 |
| Os12t0104800-01 | Rice | cytosol | 5.18 | 72.13 |
| Zm00001d021067_P001 | Maize | cytosol, mitochondrion | 18.59 | 71.33 |
| VIT_03s0017g00210.t01 | Wine grape | cytosol, extracellular | 2.0 | 64.15 |
| VIT_16s0115g00130.t01 | Wine grape | cytosol | 4.24 | 62.07 |
| VIT_19s0027g01340.t01 | Wine grape | cytosol | 8.88 | 49.19 |
| CDY06504 | Canola | extracellular, mitochondrion | 2.24 | 40.43 |
Protein Annotations
| Gene3D:1.25.40.10 | Gene3D:1.25.40.730 | Gene3D:2.130.10.110 | MapMan:22.1.1.1 | EMBL:ACUP02010809 | InterPro:ARM-type_fold |
| InterPro:Clathrin_H-chain/VPS_repeat | InterPro:Clathrin_H-chain_N | InterPro:Clathrin_H-chain_linker_core | InterPro:Clathrin_H-chain_propeller_rpt | InterPro:Clathrin_heavy_chain | ncoils:Coil |
| EnsemblPlantsGene:GLYMA_18G026000 | GO:GO:0003674 | GO:GO:0005198 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0005886 | GO:GO:0005905 |
| GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016043 |
| GO:GO:0016192 | GO:GO:0030130 | GO:GO:0030132 | GO:GO:0030659 | GO:GO:0031410 | GO:GO:0032051 |
| GO:GO:0048268 | GO:GO:0071439 | UniProt:I1MZ13 | InterPro:IPR000547 | InterPro:IPR011990 | InterPro:IPR016025 |
| EnsemblPlants:KRG97711 | ProteinID:KRG97711 | ProteinID:KRG97711.1 | PFAM:PF00637 | PFAM:PF01394 | PFAM:PF09268 |
| PFAM:PF13838 | PIRSF:PIRSF002290 | PFscan:PS50236 | PANTHER:PTHR10292 | PANTHER:PTHR10292:SF1 | SMART:SM00299 |
| SUPFAM:SSF48371 | SUPFAM:SSF50989 | InterPro:TPR-like_helical_dom_sf | UniParc:UPI0002954D88 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr18:-:1932330..1944829
Molecular Weight (calculated)
192936.0 Da
IEP (calculated)
5.211
GRAVY (calculated)
-0.156
Length
1700 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAAANAPIAM REALTLPSIG INPQFITFTH VTMESDKYIC VRETAPQNSV VIIDMNMPNQ PLRRPITADS ALMNPNSRIL ALKAQLQGTT QDHLQIFNIE
0101: MKAKMKSYQM PEQVVFWKWI TPKLLGLVTQ TSVYHWSIEG DSEPVKMFER TANLANNQII NYRCDPSEKW LVLIGIAPGS PERPQLVKGN MQLFSVDQQR
0201: SQALEAHAAS FAQFKVPGNE NPSTLISFAT KTLNAGQIIS KLHVIELGAQ PGKPSFTKKQ ADLFFPPDFA DDFPVAMQIS HKYSLIYVIT KLGLLFVYDL
0301: ETATAVYRNR ISPDPIFLTS EATSVGGFYA INRRGQVLLA TVNEQTIVNF VSGQLNNLEL AVNLAKRGNL PGAEKLVVER FHELFAQTKY KEAAELAAES
0401: PQGILRTPDT VAKFQSVPVQ AGQTPPLLQY FGTLLTRGKL NAFESLELSR LVVNQNKKNL LENWLAEDKL ECSEELGDLV KTVDNDLALK IYIKARATPK
0501: VVAAFAERRE FDKILIYSKQ VGYTPDYLFL LQTILRTDPQ GAVNFALMMS QMEGGCPVDY NTITDLFLQR NLIREATAFL LDVLKPNLPE HGYLQTKVLE
0601: INLVTFPNVA DAILANGMFS HYDRPRIAQL CEKAGLYVRA LQHYTELPDI KRVIVNTHAI EPQSLVEFFG TLSREWALEC MKDLLLVNLR GNLQIIVQVA
0701: KEYCEQLGVD ACIKLFEQFR SYEGLYFFLG SYLSSSEDPD IHFKYIEAAA KTGQIKEVER VTRESSFYDP EKTKNFLMEA KLPDARPLIN VCDRFGFVPD
0801: LTHYLYTNNM LRYIEGYVQK VNPGNAPLVV GQLLDDECPE DFIKGLILSV RSLLPVEPLV EECEKRNRLR LLTQFLEHLV SEGSQDVHVH NALGKIIIDS
0901: NNNPEHFLTT NPYYDSRVVG KYCEKRDPTL AVVAYRRGQC DDELINVTNK NSLFKLQARY VVERMDGDLW EKVLNPDNAY RRQLIDQVVS TALPESKSPE
1001: QVSAAVKAFM TADLPHELIE LLEKIVLQNS AFSGNFNLQN LLILTAIKAD PSRVMDYINR LDNFDGPAVG EMAVEAQLYE EAFAIFKKFN LNVQAVNVLL
1101: DHIHSIDRAV EFAFRVEEDA VWSQVAKAQL REGLVSDAIE SFIRADDATQ FLDVIRAAED GNAYHDLVRY LLMVRHKTKE PKVDSELIYA YAKIDRLSDI
1201: EEFILMPNVA NLQNVGDRLY DEELYEAAKI IFAFISNWAK LAVTLVKLKQ FQGAVDAARK ANSAKTWKEV CFACVDAEEF RLAQICGLNI IIQVDDLEEV
1301: SEYYQNRGCF NELISLMESG LGLERAHMGI FTELGVLYAR YRHEKLMEHI KLFATRLNIP KLIRACDEQQ HWKELTYLYI QYDEFDNAAT TIMNHSPEAW
1401: DHMQFKDVVV KVANVELYYK AVHFYLQEHP DLINDVLNVL ALRVDHARVV DIMRKAGHLR LVKPYMVAVQ SNNVSAVNEA LNEIYVEEED YDRLRESIDL
1501: HDNFDQIGLA QKIEKHELLE MRRVAAYIYK KAGRWKQSIA LSKKDNLYKD AMETASQSGD RELAEELLVY FIDQGKKECF ASCLFVCYDL IRADIALELA
1601: WMNNMIDFAF PYLLQFIREY TGKVDELVKD KIEAQNQVKA KEQEEKEVIA QQNMYAQLLP LALPAPPMPG MGGGFAPPPP MGGLGMPPMP PFGMPPMGSY
0101: MKAKMKSYQM PEQVVFWKWI TPKLLGLVTQ TSVYHWSIEG DSEPVKMFER TANLANNQII NYRCDPSEKW LVLIGIAPGS PERPQLVKGN MQLFSVDQQR
0201: SQALEAHAAS FAQFKVPGNE NPSTLISFAT KTLNAGQIIS KLHVIELGAQ PGKPSFTKKQ ADLFFPPDFA DDFPVAMQIS HKYSLIYVIT KLGLLFVYDL
0301: ETATAVYRNR ISPDPIFLTS EATSVGGFYA INRRGQVLLA TVNEQTIVNF VSGQLNNLEL AVNLAKRGNL PGAEKLVVER FHELFAQTKY KEAAELAAES
0401: PQGILRTPDT VAKFQSVPVQ AGQTPPLLQY FGTLLTRGKL NAFESLELSR LVVNQNKKNL LENWLAEDKL ECSEELGDLV KTVDNDLALK IYIKARATPK
0501: VVAAFAERRE FDKILIYSKQ VGYTPDYLFL LQTILRTDPQ GAVNFALMMS QMEGGCPVDY NTITDLFLQR NLIREATAFL LDVLKPNLPE HGYLQTKVLE
0601: INLVTFPNVA DAILANGMFS HYDRPRIAQL CEKAGLYVRA LQHYTELPDI KRVIVNTHAI EPQSLVEFFG TLSREWALEC MKDLLLVNLR GNLQIIVQVA
0701: KEYCEQLGVD ACIKLFEQFR SYEGLYFFLG SYLSSSEDPD IHFKYIEAAA KTGQIKEVER VTRESSFYDP EKTKNFLMEA KLPDARPLIN VCDRFGFVPD
0801: LTHYLYTNNM LRYIEGYVQK VNPGNAPLVV GQLLDDECPE DFIKGLILSV RSLLPVEPLV EECEKRNRLR LLTQFLEHLV SEGSQDVHVH NALGKIIIDS
0901: NNNPEHFLTT NPYYDSRVVG KYCEKRDPTL AVVAYRRGQC DDELINVTNK NSLFKLQARY VVERMDGDLW EKVLNPDNAY RRQLIDQVVS TALPESKSPE
1001: QVSAAVKAFM TADLPHELIE LLEKIVLQNS AFSGNFNLQN LLILTAIKAD PSRVMDYINR LDNFDGPAVG EMAVEAQLYE EAFAIFKKFN LNVQAVNVLL
1101: DHIHSIDRAV EFAFRVEEDA VWSQVAKAQL REGLVSDAIE SFIRADDATQ FLDVIRAAED GNAYHDLVRY LLMVRHKTKE PKVDSELIYA YAKIDRLSDI
1201: EEFILMPNVA NLQNVGDRLY DEELYEAAKI IFAFISNWAK LAVTLVKLKQ FQGAVDAARK ANSAKTWKEV CFACVDAEEF RLAQICGLNI IIQVDDLEEV
1301: SEYYQNRGCF NELISLMESG LGLERAHMGI FTELGVLYAR YRHEKLMEHI KLFATRLNIP KLIRACDEQQ HWKELTYLYI QYDEFDNAAT TIMNHSPEAW
1401: DHMQFKDVVV KVANVELYYK AVHFYLQEHP DLINDVLNVL ALRVDHARVV DIMRKAGHLR LVKPYMVAVQ SNNVSAVNEA LNEIYVEEED YDRLRESIDL
1501: HDNFDQIGLA QKIEKHELLE MRRVAAYIYK KAGRWKQSIA LSKKDNLYKD AMETASQSGD RELAEELLVY FIDQGKKECF ASCLFVCYDL IRADIALELA
1601: WMNNMIDFAF PYLLQFIREY TGKVDELVKD KIEAQNQVKA KEQEEKEVIA QQNMYAQLLP LALPAPPMPG MGGGFAPPPP MGGLGMPPMP PFGMPPMGSY
0001: MAAANAPIIM KEVLTLPSVG IGQQFITFTN VTMESDKYIC VRETAPQNSV VIIDMNMPMQ PLRRPITADS ALMNPNSRIL ALKAQVPGTT QDHLQIFNIE
0101: AKAKLKSHQM PEQVAFWKWI TPKMLGLVTQ TSVYHWSIEG DSEPVKMFDR TANLANNQII NYKCSPNEKW LVLIGIAPGS PERPQLVKGN MQLFSVDQQR
0201: SQALEAHAAS FAQFKVPGNE NPSILISFAS KSFNAGQITS KLHVIELGAQ PGKPSFTKKQ ADLFFPPDFA DDFPVAMQVS HKFNLIYVIT KLGLLFVYDL
0301: ETASAIYRNR ISPDPIFLTS EASSVGGFYA INRRGQVLLA TVNEATIIPF ISGQLNNLEL AVNLAKRGNL PGAENLVVQR FQELFAQTKY KEAAELAAES
0401: PQGILRTPDT VAKFQSVPVQ AGQTPPLLQY FGTLLTRGKL NSYESLELSR LVVNQNKKNL LENWLAEDKL ECSEELGDLV KTVDNDLALK IYIKARATPK
0501: VVAAFAERRE FDKILIYSKQ VGYTPDYMFL LQTILRTDPQ GAVNFALMMS QMEGGCPVDY NTITDLFLQR NLIREATAFL LDVLKPNLPE HAFLQTKVLE
0601: INLVTFPNVA DAILANGMFS HYDRPRVAQL CEKAGLYIQS LKHYSELPDI KRVIVNTHAI EPQALVEFFG TLSSEWAMEC MKDLLLVNLR GNLQIIVQAC
0701: KEYCEQLGVD ACIKLFEQFK SYEGLYFFLG SYLSMSEDPE IHFKYIEAAA KTGQIKEVER VTRESNFYDA EKTKNFLMEA KLPDARPLIN VCDRFGFVPD
0801: LTHYLYTNNM LRYIEGYVQK VNPGNAPLVV GQLLDDECPE DFIKGLILSV RSLLPVEPLV AECEKRNRLR LLTQFLEHLV SEGSQDVHVH NALGKIIIDS
0901: NNNPEHFLTT NPYYDSKVVG KYCEKRDPTL AVVAYRRGQC DEELINVTNK NSLFKLQARY VVERMDGDLW EKVLTEENEY RRQLIDQVVS TALPESKSPE
1001: QVSAAVKAFM TADLPHELIE LLEKIVLQNS AFSGNFNLQN LLILTAIKAD PSRVMDYINR LDNFDGPAVG EVAVDAQLYE EAFAIFKKFN LNVQAVNVLL
1101: DNVRSIERAV EFAFRVEEDA VWSQVAKAQL REGLVSDAIE SFIRADDTTQ FLEVIRASED TNVYDDLVRY LLMVRQKVKE PKVDSELIYA YAKIERLGEI
1201: EEFILMPNVA NLQHVGDRLY DEALYEAAKI IYAFISNWAK LAVTLVKLQQ FQGAVDAARK ANSAKTWKEV CFACVDAEEF RLAQICGLNI IIQVDDLEEV
1301: SEYYQNRGCF NELISLMESG LGLERAHMGI FTELGVLYAR YRYEKLMEHI KLFSTRLNIP KLIRACDEQQ HWQELTYLYI QYDEFDNAAT TVMNHSPEAW
1401: EHMQFKDIVA KVANVELYYK AVHFYLQEHP DIINDLLNVL ALRLDHTRVV DIMRKAGHLR LIKPYMVAVQ SNNVSAVNEA LNEIYAEEED YDRLRESIDL
1501: HDSFDQIGLA QKIEKHELVE MRRVAAYIYK KAGRWKQSIA LSKKDNMYKD CMETASQSGD HDLAEQLLVY FIEQGKKECF ATCLFVCYDL IRPDVALELA
1601: WINNMIDFAF PYLLQFIREY SGKVDELIKD KLEAQKEVKA KEQEEKDVMS QQNMYAQLLP LALPAPPMPG MGGGGYGPPP QMGGMPGMSG MPPMPPYGMP
1701: PMGGY
0101: AKAKLKSHQM PEQVAFWKWI TPKMLGLVTQ TSVYHWSIEG DSEPVKMFDR TANLANNQII NYKCSPNEKW LVLIGIAPGS PERPQLVKGN MQLFSVDQQR
0201: SQALEAHAAS FAQFKVPGNE NPSILISFAS KSFNAGQITS KLHVIELGAQ PGKPSFTKKQ ADLFFPPDFA DDFPVAMQVS HKFNLIYVIT KLGLLFVYDL
0301: ETASAIYRNR ISPDPIFLTS EASSVGGFYA INRRGQVLLA TVNEATIIPF ISGQLNNLEL AVNLAKRGNL PGAENLVVQR FQELFAQTKY KEAAELAAES
0401: PQGILRTPDT VAKFQSVPVQ AGQTPPLLQY FGTLLTRGKL NSYESLELSR LVVNQNKKNL LENWLAEDKL ECSEELGDLV KTVDNDLALK IYIKARATPK
0501: VVAAFAERRE FDKILIYSKQ VGYTPDYMFL LQTILRTDPQ GAVNFALMMS QMEGGCPVDY NTITDLFLQR NLIREATAFL LDVLKPNLPE HAFLQTKVLE
0601: INLVTFPNVA DAILANGMFS HYDRPRVAQL CEKAGLYIQS LKHYSELPDI KRVIVNTHAI EPQALVEFFG TLSSEWAMEC MKDLLLVNLR GNLQIIVQAC
0701: KEYCEQLGVD ACIKLFEQFK SYEGLYFFLG SYLSMSEDPE IHFKYIEAAA KTGQIKEVER VTRESNFYDA EKTKNFLMEA KLPDARPLIN VCDRFGFVPD
0801: LTHYLYTNNM LRYIEGYVQK VNPGNAPLVV GQLLDDECPE DFIKGLILSV RSLLPVEPLV AECEKRNRLR LLTQFLEHLV SEGSQDVHVH NALGKIIIDS
0901: NNNPEHFLTT NPYYDSKVVG KYCEKRDPTL AVVAYRRGQC DEELINVTNK NSLFKLQARY VVERMDGDLW EKVLTEENEY RRQLIDQVVS TALPESKSPE
1001: QVSAAVKAFM TADLPHELIE LLEKIVLQNS AFSGNFNLQN LLILTAIKAD PSRVMDYINR LDNFDGPAVG EVAVDAQLYE EAFAIFKKFN LNVQAVNVLL
1101: DNVRSIERAV EFAFRVEEDA VWSQVAKAQL REGLVSDAIE SFIRADDTTQ FLEVIRASED TNVYDDLVRY LLMVRQKVKE PKVDSELIYA YAKIERLGEI
1201: EEFILMPNVA NLQHVGDRLY DEALYEAAKI IYAFISNWAK LAVTLVKLQQ FQGAVDAARK ANSAKTWKEV CFACVDAEEF RLAQICGLNI IIQVDDLEEV
1301: SEYYQNRGCF NELISLMESG LGLERAHMGI FTELGVLYAR YRYEKLMEHI KLFSTRLNIP KLIRACDEQQ HWQELTYLYI QYDEFDNAAT TVMNHSPEAW
1401: EHMQFKDIVA KVANVELYYK AVHFYLQEHP DIINDLLNVL ALRLDHTRVV DIMRKAGHLR LIKPYMVAVQ SNNVSAVNEA LNEIYAEEED YDRLRESIDL
1501: HDSFDQIGLA QKIEKHELVE MRRVAAYIYK KAGRWKQSIA LSKKDNMYKD CMETASQSGD HDLAEQLLVY FIEQGKKECF ATCLFVCYDL IRPDVALELA
1601: WINNMIDFAF PYLLQFIREY SGKVDELIKD KLEAQKEVKA KEQEEKDVMS QQNMYAQLLP LALPAPPMPG MGGGGYGPPP QMGGMPGMSG MPPMPPYGMP
1701: PMGGY
Arabidopsis Description
CHC1Clathrin heavy chain 1 [Source:UniProtKB/Swiss-Prot;Acc:Q0WNJ6]
SUBAcon: [plasma membrane,cytosol]
SUBAcon: [plasma membrane,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.