Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH22403 | Soybean | nucleus | 76.78 | 75.61 |
| GSMUA_Achr1P17650_001 | Banana | nucleus | 31.89 | 58.19 |
| GSMUA_Achr9P23720_001 | Banana | nucleus | 33.44 | 58.06 |
| GSMUA_Achr2P18530_001 | Banana | cytosol | 15.79 | 52.04 |
| KRH21478 | Soybean | nucleus | 46.44 | 47.92 |
| CDX81980 | Canola | nucleus | 47.06 | 47.65 |
| AT2G20760.1 | Thale cress | nucleus | 49.54 | 47.34 |
| KRH10839 | Soybean | nucleus | 46.75 | 46.89 |
| KRH50011 | Soybean | nucleus | 44.89 | 46.77 |
| TraesCSU01G218200.1 | Wheat | nucleus | 30.03 | 46.63 |
| Os06t0731800-01 | Rice | nucleus, plasma membrane | 41.8 | 46.39 |
| KRH20480 | Soybean | endoplasmic reticulum | 43.03 | 45.87 |
| GSMUA_Achr3P14280_001 | Banana | nucleus | 40.56 | 45.8 |
| KRH75865 | Soybean | plastid | 36.53 | 45.38 |
| Bra031138.1-P | Field mustard | nucleus | 44.27 | 45.25 |
| CDY13859 | Canola | nucleus | 44.27 | 45.25 |
| EER89016 | Sorghum | nucleus | 39.01 | 44.21 |
| Os04t0679100-01 | Rice | extracellular, plasma membrane, plastid | 41.18 | 44.19 |
| Zm00001d014898_P001 | Maize | plasma membrane | 38.39 | 43.66 |
| CDY31939 | Canola | nucleus | 26.01 | 42.42 |
| EES11661 | Sorghum | nucleus | 39.01 | 41.86 |
| GSMUA_Achr11P... | Banana | nucleus | 40.87 | 41.12 |
| Zm00001d001814_P001 | Maize | nucleus | 37.77 | 40.8 |
| TraesCSU01G101000.3 | Wheat | nucleus | 39.01 | 40.65 |
| TraesCS2B01G594200.1 | Wheat | nucleus | 38.7 | 40.32 |
| GSMUA_Achr5P20770_001 | Banana | cytosol | 39.63 | 40.13 |
| TraesCS2A01G590000.2 | Wheat | nucleus | 37.77 | 39.23 |
| TraesCS2D01G564200.1 | Wheat | nucleus | 37.46 | 39.03 |
| Zm00001d026630_P001 | Maize | plasma membrane | 36.84 | 39.02 |
| GSMUA_Achr4P26100_001 | Banana | nucleus | 41.49 | 38.4 |
| Bra036500.1-P | Field mustard | nucleus | 24.77 | 38.1 |
| GSMUA_AchrUn_... | Banana | nucleus | 43.03 | 37.67 |
| Solyc07g054180.2.1 | Tomato | nucleus | 47.68 | 37.02 |
| HORVU2Hr1G118930.1 | Barley | cytosol, mitochondrion, nucleus | 39.01 | 36.42 |
| PGSC0003DMT400047261 | Potato | extracellular | 47.68 | 35.32 |
| GSMUA_Achr8P11240_001 | Banana | nucleus | 41.49 | 34.01 |
| HORVU7Hr1G119590.1 | Barley | nucleus, plastid | 38.08 | 33.98 |
| CDY05790 | Canola | nucleus | 17.34 | 33.33 |
Protein Annotations
| EntrezGene:100817703 | MapMan:22.1.1.2 | EMBL:ACUP02007760 | InterPro:Clathrin_L-chain | ncoils:Coil | EnsemblPlantsGene:GLYMA_12G203500 |
| GO:GO:0003674 | GO:GO:0005198 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0005886 | GO:GO:0005905 | GO:GO:0006810 |
| GO:GO:0006886 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016192 | GO:GO:0030125 | GO:GO:0030130 |
| GO:GO:0030132 | GO:GO:0030659 | GO:GO:0031410 | GO:GO:0032050 | GO:GO:0072583 | UniProt:I1LUF8 |
| EnsemblPlants:KRH26934 | ProteinID:KRH26934 | ProteinID:KRH26934.1 | PFAM:PF01086 | PANTHER:PTHR10639 | PANTHER:PTHR10639:SF8 |
| UniParc:UPI000233C9FB | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr12:+:36386224..36388470
Molecular Weight (calculated)
36623.2 Da
IEP (calculated)
5.928
GRAVY (calculated)
-1.385
Length
323 amino acids
Sequence
(BLAST)
(BLAST)
001: MASFEEQSHQ SPTRGPFDDD NSYTDTDMGM GYESHQHYDY DDQHPQLNVD PNNNNFTDNS HSPSVYGFGV STPNPDHVSP FEPATADDTT FTSDGPMLPD
101: PSQMQEEGHA RREWRRLNAI HLEEKEKREK EMRNQIIKEA EEYKEAFYEK RKVNCEKNKE NNREREKIYL ANQEKFHKEA HNHYWKAIAE IIPREVPNIE
201: KRRGKKEAEN KPSVHVIQGP KPGKPTDLAR MRQMILKLKQ NPPSHMMPPP PKEEKDSKEG KDNKNAKEGK DDKGGKSSTP TATTGVVGNK PTSPAKDVAP
301: EGEAQDPAIV EGEQVASSEP KAA
101: PSQMQEEGHA RREWRRLNAI HLEEKEKREK EMRNQIIKEA EEYKEAFYEK RKVNCEKNKE NNREREKIYL ANQEKFHKEA HNHYWKAIAE IIPREVPNIE
201: KRRGKKEAEN KPSVHVIQGP KPGKPTDLAR MRQMILKLKQ NPPSHMMPPP PKEEKDSKEG KDNKNAKEGK DDKGGKSSTP TATTGVVGNK PTSPAKDVAP
301: EGEAQDPAIV EGEQVASSEP KAA
001: MATFDDGDFP AQTHSPSEHE DFGGYDNFSE AQQPPTQHQS GGFSSFNGDP ASPNGYGFGA SSPNHDFSSP FESSVNDANG NGGGSGGDAI FASDGPILPD
101: PNEMREEGFQ RREWRRLNTI HLEEKEKKEK EMRNQIITEA EDFKKAFYEK RDKTIETNKT DNREKEKLYW ANQEKFHKEV DKHYWKAIAE LIPREVPNIE
201: KKRGKKDPDK KPSVNVIQGP KPGKPTDLGR MRQIFLKLKT NPPPHMMPPP PPAKDAKDGK DAKDGKDAKT GKDGKDAKGG KDAKDLKDGK PADPKVTEEK
301: RPSPAKDASV ETAKPDAAAS GEGEKPVAVT EAEGTKAE
101: PNEMREEGFQ RREWRRLNTI HLEEKEKKEK EMRNQIITEA EDFKKAFYEK RDKTIETNKT DNREKEKLYW ANQEKFHKEV DKHYWKAIAE LIPREVPNIE
201: KKRGKKDPDK KPSVNVIQGP KPGKPTDLGR MRQIFLKLKT NPPPHMMPPP PPAKDAKDGK DAKDGKDAKT GKDGKDAKGG KDAKDLKDGK PADPKVTEEK
301: RPSPAKDASV ETAKPDAAAS GEGEKPVAVT EAEGTKAE
Arabidopsis Description
Clathrin light chain 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKU1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.