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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • cytosol 2
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr1P17650_001 Banana nucleus 66.67 70.06
GSMUA_Achr2P18530_001 Banana cytosol 29.57 56.12
TraesCSU01G218200.1 Wheat nucleus 58.6 52.4
GSMUA_Achr3P14280_001 Banana nucleus 68.28 44.41
Zm00001d014898_P001 Maize plasma membrane 67.74 44.37
EER89016 Sorghum nucleus 67.2 43.86
Os06t0731800-01 Rice nucleus, plasma membrane 68.28 43.64
GSMUA_Achr5P20770_001 Banana cytosol 72.04 42.01
GSMUA_Achr11P... Banana nucleus 71.51 41.43
KRH21478 Soybean nucleus 68.28 40.58
KRH10839 Soybean nucleus 68.82 39.75
KRH50011 Soybean nucleus 65.59 39.35
KRH20480 Soybean endoplasmic reticulum 63.98 39.27
Os04t0679100-01 Rice extracellular, plasma membrane, plastid 63.44 39.2
TraesCSU01G101000.3 Wheat nucleus 65.05 39.03
Zm00001d001814_P001 Maize nucleus 61.83 38.46
Bra031138.1-P Field mustard nucleus 63.98 37.66
CDY13859 Canola nucleus 63.98 37.66
CDX81980 Canola nucleus 64.52 37.62
EES11661 Sorghum nucleus 60.75 37.54
TraesCS2D01G564200.1 Wheat nucleus 61.83 37.1
Zm00001d026630_P001 Maize plasma membrane 60.75 37.05
GSMUA_Achr4P26100_001 Banana nucleus 69.35 36.96
TraesCS2B01G594200.1 Wheat nucleus 61.29 36.77
TraesCS2A01G590000.2 Wheat nucleus 61.29 36.66
CDY31939 Canola nucleus 38.71 36.36
PGSC0003DMT400033344 Potato nucleus 60.22 36.13
Solyc03g006510.2.1 Tomato plastid 59.14 36.07
Solyc02g078540.2.1 Tomato nucleus 63.44 35.87
PGSC0003DMT400057639 Potato nucleus 62.9 35.45
Bra036500.1-P Field mustard nucleus 39.78 35.24
GSMUA_AchrUn_... Banana nucleus 68.82 34.69
AT2G20760.1 Thale cress nucleus 62.9 34.62
VIT_00s0370g00020.t01 Wine grape nucleus 68.82 34.13
CDY05790 Canola nucleus 30.65 33.93
KRH26934 Soybean nucleus 58.06 33.44
HORVU2Hr1G118930.1 Barley cytosol, mitochondrion, nucleus 61.83 33.24
KRH22403 Soybean nucleus 57.53 32.62
GSMUA_Achr8P11240_001 Banana nucleus 68.82 32.49
HORVU7Hr1G119590.1 Barley nucleus, plastid 62.9 32.32
Solyc07g054180.2.1 Tomato nucleus 62.37 27.88
PGSC0003DMT400047261 Potato extracellular 61.83 26.38
Protein Annotations
MapMan:22.1.1.2InterPro:Clathrin_L-chainncoils:CoilGO:GO:0003674GO:GO:0005198GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005794GO:GO:0005886GO:GO:0005905
GO:GO:0006810GO:GO:0006886GO:GO:0008150GO:GO:0016020GO:GO:0016192GO:GO:0030130
GO:GO:0030132GO:GO:0030659GO:GO:0031410EnsemblPlantsGene:GSMUA_Achr9G23720_001EnsemblPlants:GSMUA_Achr9P23720_001EnsemblPlants:GSMUA_Achr9T23720_001
UniProt:M0U2X9PFAM:PF01086PANTHER:PTHR10639PANTHER:PTHR10639:SF20UniParc:UPI000295A064SEG:seg
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr9G23720_001]
Coordinates
chr9:-:28560603..28564445
Molecular Weight (calculated)
21309.5 Da
IEP (calculated)
10.480
GRAVY (calculated)
-1.216
Length
186 amino acids
Sequence
(BLAST)
001: MQPDEGFILR EWRRQNAILL EEKERKEKEL RNQIIVEAEE YKHAFYEKRQ LNSETNKKQN REREKLFLAN QENFHANADK QYWKTIAELI PREIANIEKK
101: RGKKDQDKKP SVVIIQGPKP GKPTDLSRMR QILLKLKHTP PPHMKPPPPP PPAAKDGATG ANAGSKQAAP ANSKETPVPS SEGRQA
Best Arabidopsis Sequence Match ( AT2G20760.1 )
(BLAST)
001: MATFDDGDFP AQTHSPSEHE DFGGYDNFSE AQQPPTQHQS GGFSSFNGDP ASPNGYGFGA SSPNHDFSSP FESSVNDANG NGGGSGGDAI FASDGPILPD
101: PNEMREEGFQ RREWRRLNTI HLEEKEKKEK EMRNQIITEA EDFKKAFYEK RDKTIETNKT DNREKEKLYW ANQEKFHKEV DKHYWKAIAE LIPREVPNIE
201: KKRGKKDPDK KPSVNVIQGP KPGKPTDLGR MRQIFLKLKT NPPPHMMPPP PPAKDAKDGK DAKDGKDAKT GKDGKDAKGG KDAKDLKDGK PADPKVTEEK
301: RPSPAKDASV ETAKPDAAAS GEGEKPVAVT EAEGTKAE
Arabidopsis Description
Clathrin light chain 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKU1]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.