Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P20770_001 | Banana | cytosol | 74.45 | 74.92 |
| GSMUA_Achr1P17650_001 | Banana | nucleus | 39.56 | 71.75 |
| GSMUA_Achr9P23720_001 | Banana | nucleus | 41.43 | 71.51 |
| GSMUA_Achr2P18530_001 | Banana | cytosol | 18.38 | 60.2 |
| GSMUA_Achr4P26100_001 | Banana | nucleus | 63.55 | 58.45 |
| GSMUA_Achr3P14280_001 | Banana | nucleus | 51.71 | 58.04 |
| Os06t0731800-01 | Rice | nucleus, plasma membrane | 52.34 | 57.73 |
| TraesCSU01G218200.1 | Wheat | nucleus | 36.45 | 56.25 |
| GSMUA_Achr8P11240_001 | Banana | nucleus | 68.54 | 55.84 |
| Zm00001d014898_P001 | Maize | plasma membrane | 49.22 | 55.63 |
| EER89016 | Sorghum | nucleus | 49.22 | 55.44 |
| GSMUA_AchrUn_... | Banana | nucleus | 62.62 | 54.47 |
| TraesCSU01G101000.3 | Wheat | nucleus | 48.6 | 50.32 |
| Os04t0679100-01 | Rice | extracellular, plasma membrane, plastid | 45.48 | 48.51 |
| KRH50011 | Soybean | nucleus | 46.42 | 48.06 |
| Solyc03g006510.2.1 | Tomato | plastid | 45.17 | 47.54 |
| KRH21478 | Soybean | nucleus | 46.11 | 47.28 |
| KRH20480 | Soybean | endoplasmic reticulum | 44.55 | 47.19 |
| TraesCS2B01G594200.1 | Wheat | nucleus | 45.48 | 47.1 |
| KRH10839 | Soybean | nucleus | 47.04 | 46.89 |
| TraesCS2A01G590000.2 | Wheat | nucleus | 45.17 | 46.62 |
| Zm00001d001814_P001 | Maize | nucleus | 43.3 | 46.49 |
| PGSC0003DMT400033344 | Potato | nucleus | 44.86 | 46.45 |
| TraesCS2D01G564200.1 | Wheat | nucleus | 44.55 | 46.13 |
| CDX81980 | Canola | nucleus | 45.79 | 46.08 |
| Bra031138.1-P | Field mustard | nucleus | 44.86 | 45.57 |
| CDY13859 | Canola | nucleus | 44.86 | 45.57 |
| EES11661 | Sorghum | nucleus | 42.68 | 45.51 |
| PGSC0003DMT400057639 | Potato | nucleus | 46.73 | 45.45 |
| Solyc02g078540.2.1 | Tomato | nucleus | 45.48 | 44.38 |
| VIT_00s0370g00020.t01 | Wine grape | nucleus | 51.71 | 44.27 |
| Zm00001d026630_P001 | Maize | plasma membrane | 42.06 | 44.26 |
| HORVU7Hr1G119590.1 | Barley | nucleus, plastid | 47.98 | 42.54 |
| AT2G20760.1 | Thale cress | nucleus | 43.93 | 41.72 |
| HORVU2Hr1G118930.1 | Barley | cytosol, mitochondrion, nucleus | 44.86 | 41.62 |
| KRH22403 | Soybean | nucleus | 42.37 | 41.46 |
| KRH26934 | Soybean | nucleus | 41.12 | 40.87 |
| CDY31939 | Canola | nucleus | 24.92 | 40.4 |
| Bra036500.1-P | Field mustard | nucleus | 24.3 | 37.14 |
| Solyc07g054180.2.1 | Tomato | nucleus | 45.48 | 35.1 |
| CDY05790 | Canola | nucleus | 17.45 | 33.33 |
| PGSC0003DMT400047261 | Potato | extracellular | 44.55 | 32.8 |
Protein Annotations
| MapMan:22.1.1.2 | InterPro:Clathrin_L-chain | ncoils:Coil | GO:GO:0003674 | GO:GO:0005198 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0005886 | GO:GO:0005905 |
| GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016192 | GO:GO:0030130 |
| GO:GO:0030132 | GO:GO:0030659 | GO:GO:0031410 | EnsemblPlantsGene:GSMUA_Achr11G04170_001 | EnsemblPlants:GSMUA_Achr11P04170_001 | EnsemblPlants:GSMUA_Achr11T04170_001 |
| UniProt:M0RP97 | PFAM:PF01086 | PANTHER:PTHR10639 | PANTHER:PTHR10639:SF20 | UniParc:UPI000294F32B | SEG:seg |
Description
Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_Achr11G04170_001]
Coordinates
chr11:-:3049468..3054916
Molecular Weight (calculated)
35152.1 Da
IEP (calculated)
6.700
GRAVY (calculated)
-0.810
Length
321 amino acids
Sequence
(BLAST)
(BLAST)
001: MASAFDTFSN DGDDAAAAAA GGSVATRPFD DGYLGYDPRL PSQRFDAFSS FSPSEDVDPT VDHLTPSSPG FPIDGYGFSS AASPFTMPQA NGTAAYGVEE
101: NGEIFTSDGP ILPDPSNMQR EEGFILREWR RQNAILLEEK ERKEKERQNE IIAEAEEFKQ AFYEKRKLNC ETNKLQNRER EKLYLANQEK FHANADKQYW
201: KAISELIPHE IASIKKRGKK EQEKKPSVVV IQGPKPGKPT DLSRMRQILV KLKHTPPPHM KPPTPPTSAP AKDGAAAAAA GKKPSSPTKD AKANGPADSP
301: KVDISVTEGQ TVKAPELVRT A
101: NGEIFTSDGP ILPDPSNMQR EEGFILREWR RQNAILLEEK ERKEKERQNE IIAEAEEFKQ AFYEKRKLNC ETNKLQNRER EKLYLANQEK FHANADKQYW
201: KAISELIPHE IASIKKRGKK EQEKKPSVVV IQGPKPGKPT DLSRMRQILV KLKHTPPPHM KPPTPPTSAP AKDGAAAAAA GKKPSSPTKD AKANGPADSP
301: KVDISVTEGQ TVKAPELVRT A
001: MATFDDGDFP AQTHSPSEHE DFGGYDNFSE AQQPPTQHQS GGFSSFNGDP ASPNGYGFGA SSPNHDFSSP FESSVNDANG NGGGSGGDAI FASDGPILPD
101: PNEMREEGFQ RREWRRLNTI HLEEKEKKEK EMRNQIITEA EDFKKAFYEK RDKTIETNKT DNREKEKLYW ANQEKFHKEV DKHYWKAIAE LIPREVPNIE
201: KKRGKKDPDK KPSVNVIQGP KPGKPTDLGR MRQIFLKLKT NPPPHMMPPP PPAKDAKDGK DAKDGKDAKT GKDGKDAKGG KDAKDLKDGK PADPKVTEEK
301: RPSPAKDASV ETAKPDAAAS GEGEKPVAVT EAEGTKAE
101: PNEMREEGFQ RREWRRLNTI HLEEKEKKEK EMRNQIITEA EDFKKAFYEK RDKTIETNKT DNREKEKLYW ANQEKFHKEV DKHYWKAIAE LIPREVPNIE
201: KKRGKKDPDK KPSVNVIQGP KPGKPTDLGR MRQIFLKLKT NPPPHMMPPP PPAKDAKDGK DAKDGKDAKT GKDGKDAKGG KDAKDLKDGK PADPKVTEEK
301: RPSPAKDASV ETAKPDAAAS GEGEKPVAVT EAEGTKAE
Arabidopsis Description
Clathrin light chain 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKU1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.