Factsheet for TraesCS2A01G590000.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G564200.1	Wheat	nucleus	92.28	92.58
TraesCS2B01G594200.1	Wheat	nucleus	91.0	91.29
HORVU2Hr1G118930.1	Barley	cytosol, mitochondrion, nucleus	86.82	78.03
Os04t0679100-01	Rice	extracellular, plasma membrane, plastid	67.2	69.44
Zm00001d001814_P001	Maize	nucleus	66.56	69.23
EES11661	Sorghum	nucleus	65.59	67.77
Zm00001d026630_P001	Maize	plasma membrane	63.34	64.59
GSMUA_Achr1P17650_001	Banana	nucleus	36.01	63.28
GSMUA_Achr9P23720_001	Banana	nucleus	36.66	61.29
GSMUA_Achr3P14280_001	Banana	nucleus	45.66	49.65
GSMUA_Achr5P20770_001	Banana	cytosol	47.27	46.08
KRH10839	Soybean	nucleus	47.59	45.96
GSMUA_Achr11P...	Banana	nucleus	46.62	45.17
KRH21478	Soybean	nucleus	45.02	44.73
GSMUA_Achr2P18530_001	Banana	cytosol	13.83	43.88
KRH50011	Soybean	nucleus	43.73	43.87
CDX81980	Canola	nucleus	44.69	43.57
KRH20480	Soybean	endoplasmic reticulum	42.44	43.56
Solyc03g006510.2.1	Tomato	plastid	41.8	42.62
PGSC0003DMT400057639	Potato	nucleus	45.02	42.42
Solyc02g078540.2.1	Tomato	nucleus	44.37	41.95
GSMUA_Achr4P26100_001	Banana	nucleus	46.95	41.83
PGSC0003DMT400033344	Potato	nucleus	41.48	41.61
Bra031138.1-P	Field mustard	nucleus	42.12	41.46
CDY13859	Canola	nucleus	42.12	41.46
CDY31939	Canola	nucleus	25.08	39.39
GSMUA_AchrUn_...	Banana	nucleus	45.98	38.75
AT2G20760.1	Thale cress	nucleus	41.8	38.46
KRH22403	Soybean	nucleus	39.87	37.8
KRH26934	Soybean	nucleus	39.23	37.77
VIT_00s0370g00020.t01	Wine grape	nucleus	45.34	37.6
Bra036500.1-P	Field mustard	nucleus	25.08	37.14
TraesCS2A01G058000.1	Wheat	nucleus	40.84	36.81
GSMUA_Achr8P11240_001	Banana	nucleus	45.66	36.04
CDY05790	Canola	nucleus	18.97	35.12
Solyc07g054180.2.1	Tomato	nucleus	40.84	30.53
PGSC0003DMT400047261	Potato	extracellular	40.84	29.13

Protein Annotations

MapMan:22.1.1.2	InterPro:Clathrin_L-chain	ncoils:Coil	GO:GO:0003674	GO:GO:0005198	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005829	GO:GO:0005886
GO:GO:0006810	GO:GO:0006886	GO:GO:0008150	GO:GO:0016020	GO:GO:0016192	GO:GO:0030130
GO:GO:0030132	GO:GO:0072583	PFAM:PF01086	PANTHER:PTHR10639	PANTHER:PTHR10639:SF12	EnsemblPlantsGene:TraesCS2A01G590000
EnsemblPlants:TraesCS2A01G590000.2	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr2A:-:778425662..778428019

Molecular Weight (calculated)

33246.3 Da

IEP (calculated)

4.488

GRAVY (calculated)

-0.807

Length

311 amino acids

Sequence
(BLAST)

001: MDPFFAADDA ADELPRTASH PFDDAEDDEG AAAAGADGGA GGYASFADAG YGSFADAGPE EEEVDEEIAV DSDGGAVPVR HVSGGYAPAA FFPDSDFGGG
101: DDDGGPVLPP PAEMGREEGA LLREWRRQNA LVLEEKEQKE KELRAQIIAE AEEFKIAFNE KRIQTCETNK VHSREREKIF VESQEKFHAS ADKQYWKSIS
201: ELIPHEIATI EKRGKKDKDK KPSIAVIQGP KPGKPTDLSR MRQVLVKLKH APPPHMMQPP PAPAAKEGAK EGAKDGAPAP ANGAKQPVES KEAPANGPAA
301: ETEKEQTAAS E

Best Arabidopsis Sequence Match ( AT2G40060.1 )
(BLAST)

001: MSAFEDDSFV ILNDDASESV PVSGSFDATD SFSAFDGSLQ VEDSVDDVFA APSSDYGAYS NGDGIFGSNG DHDGPILPPP SEMESDEGFA LREWRRQNAI
101: QLEEKEKREK ELLKQIIEEA DQYKEEFHKK IEVTCENNKA ANREKEKLYL ENQEKFYAES SKNYWKAIAE LVPKEVPTIE KRRGKKEQQD PKKPTVSVIQ
201: GPKPGKPTDL TRMRQILVKL KHNPPSHLKL TSQPPSEEAA APPKNVPETK PTEAVTAA

Arabidopsis Description

CLC2Clathrin light chain [Source:UniProtKB/TrEMBL;Acc:A0A178W0Q3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.