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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • cytosol 2
  • mitochondrion 2
  • plastid 2
  • plasma membrane 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES07849 Sorghum plastid 99.77 99.82
Zm00001d044614_P086 Maize plastid 99.3 99.12
Zm00001d023218_P064 Maize plastid 98.83 98.31
Os11t0104900-00 Rice plasma membrane 39.88 97.57
TraesCS5B01G152300.1 Wheat unclear 96.9 97.01
TraesCS5A01G153500.1 Wheat golgi, unclear 96.9 97.01
TraesCS4A01G182300.1 Wheat extracellular, golgi 97.25 96.97
TraesCS5D01G158800.1 Wheat plastid 96.78 96.9
TraesCS4D01G130900.1 Wheat golgi, unclear 97.13 96.85
Zm00001d005090_P106 Maize plastid 97.78 96.15
TraesCS4B01G136100.2 Wheat golgi, unclear 96.84 95.61
Os12t0104766-00 Rice plasma membrane 32.16 95.16
Os11t0104866-00 Rice plasma membrane 32.11 94.98
Zm00001d052308_P046 Maize cytosol, plastid 95.91 94.2
HORVU4Hr1G024710.4 Barley plastid 96.9 93.04
VIT_06s0004g06860.t01 Wine grape cytosol, plastid 92.51 92.79
Os12t0104800-01 Rice cytosol 6.61 92.62
GSMUA_Achr4P16770_001 Banana cytosol 92.98 92.5
GSMUA_Achr5P08520_001 Banana plastid 92.22 92.33
GSMUA_AchrUn_... Banana plasma membrane 73.16 92.05
KRG97711 Soybean endoplasmic reticulum, nucleus 91.29 91.82
HORVU5Hr1G048010.1 Barley plastid 96.78 91.79
Solyc06g051310.2.1 Tomato nucleus 91.29 91.77
VIT_13s0067g01290.t01 Wine grape extracellular 91.4 91.73
KRH31163 Soybean endoplasmic reticulum 90.99 91.53
Solyc05g052510.2.1 Tomato nucleus, plastid 91.23 91.44
GSMUA_Achr4P18860_001 Banana cytosol 86.55 91.41
CDY36318 Canola cytosol 39.18 91.03
KRH14933 Soybean nucleus 90.35 90.88
KRH73205 Soybean nucleus 90.7 90.86
AT3G11130.1 Thale cress cytosol, plasma membrane 90.47 90.73
AT3G08530.1 Thale cress cytosol, plasma membrane, plastid 90.23 90.6
KRH28591 Soybean endoplasmic reticulum 90.12 90.54
Solyc03g096000.2.1 Tomato nucleus 90.12 90.54
KRH76885 Soybean endoplasmic reticulum 90.0 90.42
CDY00997 Canola extracellular 90.18 90.33
CDY36301 Canola cytosol 88.71 90.3
CDY00724 Canola cytosol 88.71 90.3
Bra034864.1-P Field mustard cytosol 78.54 90.26
CDY07954 Canola cytosol 88.25 90.09
KRH72708 Soybean endoplasmic reticulum, mitochondrion 89.77 89.98
CDX73889 Canola cytosol 88.54 89.96
Bra034166.1-P Field mustard cytosol 76.02 89.78
CDX74011 Canola cytosol 88.01 89.69
KRH17059 Soybean endoplasmic reticulum, nucleus 89.3 89.67
CDY08549 Canola cytosol 80.94 89.58
CDY22158 Canola cytosol 9.94 89.47
GSMUA_AchrUn_... Banana plasma membrane 88.66 88.92
Bra001286.1-P Field mustard cytosol 76.26 87.87
GSMUA_Achr5P14240_001 Banana cytosol, plasma membrane, plastid 89.42 87.72
Bra001391.1-P Field mustard cytosol 73.74 86.85
CDY27997 Canola cytosol 78.42 83.81
CDY35984 Canola cytosol 78.13 83.19
Bra029698.1-P Field mustard cytosol 71.87 83.1
CDY36317 Canola cytosol 11.87 80.24
KRH12961 Soybean cytosol 4.39 78.12
KRH25762 Soybean cytosol 4.27 76.04
CDY22157 Canola cytosol 3.45 75.64
VIT_16s0115g00130.t01 Wine grape cytosol 4.04 59.48
VIT_03s0017g00210.t01 Wine grape cytosol, extracellular 1.81 58.49
VIT_19s0027g01340.t01 Wine grape cytosol 8.65 48.21
CDY06504 Canola extracellular, mitochondrion 2.22 40.43
Protein Annotations
Gene3D:1.25.40.10Gene3D:1.25.40.730Gene3D:2.130.10.110MapMan:22.1.1.1UniProt:A0A1B6PAV5InterPro:ARM-type_fold
InterPro:Clathrin_H-chain/VPS_repeatInterPro:Clathrin_H-chain_NInterPro:Clathrin_H-chain_linker_coreInterPro:Clathrin_H-chain_propeller_rptInterPro:Clathrin_heavy_chainncoils:Coil
GO:GO:0003674GO:GO:0005198GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005794GO:GO:0005886GO:GO:0005905GO:GO:0006810
GO:GO:0006886GO:GO:0008150GO:GO:0009987GO:GO:0016020GO:GO:0016043GO:GO:0016192
GO:GO:0030130GO:GO:0030132GO:GO:0030659GO:GO:0031410GO:GO:0032051GO:GO:0048268
GO:GO:0071439InterPro:IPR000547InterPro:IPR011990InterPro:IPR016025EnsemblPlants:KXG22761ProteinID:KXG22761
ProteinID:KXG22761.1PFAM:PF00637PFAM:PF01394PFAM:PF09268PFAM:PF13838PIRSF:PIRSF002290
PFscan:PS50236PANTHER:PTHR10292PANTHER:PTHR10292:SF1SMART:SM00299EnsemblPlantsGene:SORBI_3008G003700SUPFAM:SSF48371
SUPFAM:SSF50989InterPro:TPR-like_helical_dom_sfUniParc:UPI00081ABCECSEG:seg::
Description
hypothetical protein
Coordinates
chr8:+:324076..334834
Molecular Weight (calculated)
193622.0 Da
IEP (calculated)
5.019
GRAVY (calculated)
-0.165
Length
1710 amino acids
Sequence
(BLAST)
0001: MAAANAPIAM REALTLTSLG IAPQFVTFTH VTMESEKYIC VRETSPQNSV VIIDMAMPMQ PLRRPITADS ALMNPNTRIL ALKAQIPGTT QDHLQIFNIE
0101: AKTKIKSHQM PEQVVFWKWI TPKLLGLVTQ TSVYHWSIEG DSEPTKMFDR TANLANNQII NYRCDPAEKW LVLIGIAPGA PERPQLVKGN MQLFSVDQQR
0201: SQALEAHAAS FATFKVVGNE NPSTLICFAS KTTNAGQITS KLHVIELGAQ PGKPGFSKKQ ADLFFPPDFQ DDFPVAMQVS QKYGLIYVIT KLGLLFVYDL
0301: ETAAAVYRNR ISPDPIFLTA ESSSTGGFYA INRRGQVLHA TVNDATVVPF VSGQLNNLEL AVNLAKRANL PGAENLVVQR FQELFAQTKY KEAAELAAES
0401: PQGLLRTPET VAKFQSVPVQ AGQTPPLLQY FGTLLTRGKL NAFESLELSR LVVNQNKKNL LENWLAEDKL ECSEELGDLV KTVDNDLALK IYIKARATPK
0501: VVAAFAERRE FDKILIYSKQ VGYTPDYLFL LQTILRTDPQ GAVNFALMMS QMEGGCPVDY NTITDLFLQR NMIREATAFL LDVLKPNLPE HAFLQTKVLE
0601: INLVTYPNVA DAILANGMFS HYDRPRIAQL CEKAGLYLRA LQHYSELPDI KRVIVNTHAI EPQALVEFFG TLSREWALEC MKDLLLVNLR GNLQIVVQAA
0701: KEYSEQLGVD ACIKLFEQFK SYEGLYFFLG SYLSSSEDPD IHFKYIEAAA RTGQIKEVER VTRESNFYDA EKTKNFLMEA KLPDARPLIN VCDRFGFVPD
0801: LTHYLYTNNM LRYIEGYVQK VNPGNAPLVV GQLLDDECPE DFIKGLILSV RSLLPVEPLV DECEKRNRLR LLTQFLEHLV SEGSQDVHVH NALGKIIIDS
0901: NNNPEHFLTT NPFYDSRVVG KYCEKRDPTL AVVAYRRGQC DDELINVTNK NSLFKLQARY VVERMDGDLW DKVLQPENEY RRQLIDQVVS TALPESKSPE
1001: QVSAAVKAFM TADLPHELIE LLEKIVLQNS AFSGNFNLQN LLILTAIKAD PSRVMDYINR LDNFDGPAVG EVAVEAQLYE EAFAIFKKFN LNVQAVNVLL
1101: DNIRSIERAE EFAFRVEEDA VWSQVAKAQL REGLVSEAIE SFIRADDAAH FLDVICAAEE ANVYDDLVKY LLMVRQKARE PKVDGELIFA YAKIDRLSEI
1201: EEFILMPNVA NLQNVGDRLY DEELYEAAKI IYAFISNWAK LAVTLVKLKQ FQGAVDAARK ANSAKTWKEV CFACVDAEEF RLAQICGLNI IVQVDDLEEV
1301: SEYYQNRGCF NELIALMESG LGLERAHMGI FTELGVLYAR YRPEKLMEHI KLFSTRLNIP KLIRACDEQQ HWKELTYLYI QYDEFDNAAT TIMNHSPDAW
1401: DHMQFKDVCV KVANVELYYK AVHFYLQEHP DLINDMLNVL ALRLDHTRVV DIMRKAGQLH LVKPYMVAVQ SNNVSAVNEA LNELYVEEED YERLRESVDM
1501: HDNFDQIGLA QKLEKHELLE MRRIAAYIYK KAGRWKQSIA LSKKDNMYKD CMETCSQSGD RELSEDLLVY FIEQGKKECF ASCLFICYDL IRPDVALELA
1601: WMNNMLDFAF PYLLQFIREY TSKVDDLVKD KIESQKEERA KEKEEKDLVA QQNMYAQLLP LALPAPPMPG MGGPPPPMGG MGMPPMGGMG MPPMGPGPMP
1701: AFGMPPMGSY
Best Arabidopsis Sequence Match ( AT3G11130.1 )
(BLAST)
0001: MAAANAPIIM KEVLTLPSVG IGQQFITFTN VTMESDKYIC VRETAPQNSV VIIDMNMPMQ PLRRPITADS ALMNPNSRIL ALKAQVPGTT QDHLQIFNIE
0101: AKAKLKSHQM PEQVAFWKWI TPKMLGLVTQ TSVYHWSIEG DSEPVKMFDR TANLANNQII NYKCSPNEKW LVLIGIAPGS PERPQLVKGN MQLFSVDQQR
0201: SQALEAHAAS FAQFKVPGNE NPSILISFAS KSFNAGQITS KLHVIELGAQ PGKPSFTKKQ ADLFFPPDFA DDFPVAMQVS HKFNLIYVIT KLGLLFVYDL
0301: ETASAIYRNR ISPDPIFLTS EASSVGGFYA INRRGQVLLA TVNEATIIPF ISGQLNNLEL AVNLAKRGNL PGAENLVVQR FQELFAQTKY KEAAELAAES
0401: PQGILRTPDT VAKFQSVPVQ AGQTPPLLQY FGTLLTRGKL NSYESLELSR LVVNQNKKNL LENWLAEDKL ECSEELGDLV KTVDNDLALK IYIKARATPK
0501: VVAAFAERRE FDKILIYSKQ VGYTPDYMFL LQTILRTDPQ GAVNFALMMS QMEGGCPVDY NTITDLFLQR NLIREATAFL LDVLKPNLPE HAFLQTKVLE
0601: INLVTFPNVA DAILANGMFS HYDRPRVAQL CEKAGLYIQS LKHYSELPDI KRVIVNTHAI EPQALVEFFG TLSSEWAMEC MKDLLLVNLR GNLQIIVQAC
0701: KEYCEQLGVD ACIKLFEQFK SYEGLYFFLG SYLSMSEDPE IHFKYIEAAA KTGQIKEVER VTRESNFYDA EKTKNFLMEA KLPDARPLIN VCDRFGFVPD
0801: LTHYLYTNNM LRYIEGYVQK VNPGNAPLVV GQLLDDECPE DFIKGLILSV RSLLPVEPLV AECEKRNRLR LLTQFLEHLV SEGSQDVHVH NALGKIIIDS
0901: NNNPEHFLTT NPYYDSKVVG KYCEKRDPTL AVVAYRRGQC DEELINVTNK NSLFKLQARY VVERMDGDLW EKVLTEENEY RRQLIDQVVS TALPESKSPE
1001: QVSAAVKAFM TADLPHELIE LLEKIVLQNS AFSGNFNLQN LLILTAIKAD PSRVMDYINR LDNFDGPAVG EVAVDAQLYE EAFAIFKKFN LNVQAVNVLL
1101: DNVRSIERAV EFAFRVEEDA VWSQVAKAQL REGLVSDAIE SFIRADDTTQ FLEVIRASED TNVYDDLVRY LLMVRQKVKE PKVDSELIYA YAKIERLGEI
1201: EEFILMPNVA NLQHVGDRLY DEALYEAAKI IYAFISNWAK LAVTLVKLQQ FQGAVDAARK ANSAKTWKEV CFACVDAEEF RLAQICGLNI IIQVDDLEEV
1301: SEYYQNRGCF NELISLMESG LGLERAHMGI FTELGVLYAR YRYEKLMEHI KLFSTRLNIP KLIRACDEQQ HWQELTYLYI QYDEFDNAAT TVMNHSPEAW
1401: EHMQFKDIVA KVANVELYYK AVHFYLQEHP DIINDLLNVL ALRLDHTRVV DIMRKAGHLR LIKPYMVAVQ SNNVSAVNEA LNEIYAEEED YDRLRESIDL
1501: HDSFDQIGLA QKIEKHELVE MRRVAAYIYK KAGRWKQSIA LSKKDNMYKD CMETASQSGD HDLAEQLLVY FIEQGKKECF ATCLFVCYDL IRPDVALELA
1601: WINNMIDFAF PYLLQFIREY SGKVDELIKD KLEAQKEVKA KEQEEKDVMS QQNMYAQLLP LALPAPPMPG MGGGGYGPPP QMGGMPGMSG MPPMPPYGMP
1701: PMGGY
Arabidopsis Description
CHC1Clathrin heavy chain 1 [Source:UniProtKB/Swiss-Prot;Acc:Q0WNJ6]
SUBAcon: [plasma membrane,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.