Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY35984 | Canola | cytosol | 96.5 | 96.14 |
| CDY36318 | Canola | cytosol | 40.94 | 88.99 |
| CDY08549 | Canola | cytosol | 82.44 | 85.37 |
| CDY07954 | Canola | cytosol | 88.19 | 84.24 |
| CDX74011 | Canola | cytosol | 88.25 | 84.15 |
| CDY36301 | Canola | cytosol | 87.56 | 83.39 |
| CDY00997 | Canola | extracellular | 88.94 | 83.36 |
| CDY00724 | Canola | cytosol | 87.44 | 83.27 |
| CDX73889 | Canola | cytosol | 87.5 | 83.18 |
| CDY36317 | Canola | cytosol | 13.06 | 82.61 |
| Os11t0104900-00 | Rice | plasma membrane | 35.81 | 81.97 |
| CDY22158 | Canola | cytosol | 9.69 | 81.58 |
| Os12t0104766-00 | Rice | plasma membrane | 29.31 | 81.14 |
| Os11t0104866-00 | Rice | plasma membrane | 29.12 | 80.62 |
| KRG97711 | Soybean | endoplasmic reticulum, nucleus | 85.38 | 80.35 |
| KRH31163 | Soybean | endoplasmic reticulum | 85.19 | 80.18 |
| KRH14933 | Soybean | nucleus | 84.81 | 79.82 |
| KRH73205 | Soybean | nucleus | 84.88 | 79.55 |
| EES07849 | Sorghum | plastid | 83.88 | 78.53 |
| KXG22761 | Sorghum | plastid | 83.81 | 78.42 |
| TraesCS5D01G158800.1 | Wheat | plastid | 83.69 | 78.4 |
| TraesCS5A01G153500.1 | Wheat | golgi, unclear | 83.62 | 78.34 |
| TraesCS5B01G152300.1 | Wheat | unclear | 83.62 | 78.34 |
| TraesCS4A01G182300.1 | Wheat | extracellular, golgi | 83.5 | 77.9 |
| TraesCS4D01G130900.1 | Wheat | golgi, unclear | 83.38 | 77.78 |
| TraesCS4B01G136100.2 | Wheat | golgi, unclear | 83.38 | 77.02 |
| HORVU4Hr1G024710.4 | Barley | plastid | 83.31 | 74.85 |
| CDY22157 | Canola | cytosol | 3.62 | 74.36 |
| HORVU5Hr1G048010.1 | Barley | plastid | 83.44 | 74.04 |
| Os12t0104800-01 | Rice | cytosol | 4.62 | 60.66 |
| CDY06504 | Canola | extracellular, mitochondrion | 2.44 | 41.49 |
Protein Annotations
| Gene3D:1.25.40.10 | Gene3D:1.25.40.730 | Gene3D:2.130.10.110 | MapMan:22.1.1.1 | GO:A0A078GS76 | UniProt:A0A078GS76 |
| InterPro:ARM-type_fold | EnsemblPlants:CDY27997 | ProteinID:CDY27997 | ProteinID:CDY27997.1 | InterPro:Clathrin_H-chain/VPS_repeat | InterPro:Clathrin_H-chain_N |
| InterPro:Clathrin_H-chain_linker_core | InterPro:Clathrin_H-chain_propeller_rpt | InterPro:Clathrin_heavy_chain | ncoils:Coil | GO:GO:0003674 | GO:GO:0005198 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005794 | GO:GO:0005886 | GO:GO:0005905 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0016192 | GO:GO:0030130 | GO:GO:0030132 |
| GO:GO:0030659 | GO:GO:0031410 | GO:GO:0032051 | GO:GO:0048268 | GO:GO:0071439 | EnsemblPlantsGene:GSBRNA2T00038921001 |
| InterPro:IPR000547 | InterPro:IPR011990 | InterPro:IPR016025 | PFAM:PF00637 | PFAM:PF01394 | PFAM:PF09268 |
| PFAM:PF13838 | PIRSF:PIRSF002290 | PFscan:PS50236 | PANTHER:PTHR10292 | PANTHER:PTHR10292:SF1 | SMART:SM00299 |
| SUPFAM:SSF48371 | SUPFAM:SSF50989 | InterPro:TPR-like_helical_dom_sf | UniParc:UPI0004EDB61C | SEG:seg | : |
Description
BnaC05g43990DClathrin heavy chain [Source:UniProtKB/TrEMBL;Acc:A0A078GS76]
Coordinates
chrLK032213:+:129147..137479
Molecular Weight (calculated)
181168.0 Da
IEP (calculated)
4.954
GRAVY (calculated)
-0.123
Length
1600 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAAPNAPITM KEVLTLPSVG INQQFITFTN VTMESDKYIC VRETSPQNSV VIIDMNMPMQ PLRRPITADS ALMNPNSRIL ALKAQVPGTT QDYLQMFNIE
0101: AKAKLKSHQM PDQVEFWKWI TPKMLGLVTQ NSVYHWSIEG CDSEPVKMFD RATKLENNQI INYKCSPNEK WLVLIGIAPG PPERPQLVKG NMQLFSVDQQ
0201: QTQSLDAHAA SFAQFKVPGN ENPSTLISFA TKSFNAGQIT SNVHVIELGA LPGKASFTKK KADLSFLPDF ADDFPVAMQI SNKFSLIYVI TKLGLLFVYD
0301: LETASPIYRN RISTDPIFLT SEASSVGGFY AINRRGQVLL ATVNEATIIP FISGPLKNLE LAVNLAKRGN LPGAEDLVVK RFKELFDQTK YKEAAELASE
0401: SPQGILRTPD TVAKFQSVPV QAGQTPPLLQ YFGTLLTKGK LNSYESLELS RLVVNQNKKN LLKNWLEEDK LECSEELGDL VKTLDNDLAL EIYIKAQTSP
0501: KVVAALAEKR EFDNIIIYSE KVKYTPDYLF LLQTILRTDP QGAGEFAVKM SHMKGGCPLD INTITDLFLQ RNLIREATAF LLDVLKPNLP EHAFLQTKVL
0601: EINLVTFPNV ADAILAGSMF SHYDRPRVAQ LCEKAGLYIQ SLKHYSELND IKRVIVNTHA IEPQALVDFL GTLSSDWVME CMKELLIVNP RGNLQIIVQA
0701: CKEYCEQLGV DACIKLFEQF KSYEGLYFFL GSYVRMSEDP EVHFKYIEAS AKTGQIKEVE RVTRESNFYD AEKTKNFLME AKLPDARPLI NVCDRFGFVP
0801: DLTHYLYINN MLRYIEGYAQ KVNPGSAPLV VGQLLDDECP EDFIKGLIIS VRSLLPVEPL VEECEKRNRL RLLTHFLEHL VTEGSQDVHV HNALGKIIID
0901: SNNNPELSSA VKAFMTADLP HELIELLEKI VLQNSDFSGN INLQNLLILT AVKADTSRVM DYVNRLENFD GPVVGEMAVE AQLFEEAFAI FKKFNLNVEA
1001: VNVLLDNIKS IERAAEFAFR VEEDSVWSQV AKAQLREGLV SDAIESFIRA EDATHFLEMI RVAEDANVYD DMVSYLLMVR NKVKEVKVDS ELIYAYAKID
1101: RLGEVEDFIL MPNVANLQIV GDRMYDEAMY EAAKIVYAFV SNWGKLAVTL VKLQQFQGAV DAARKASSAK TWKEVCFACV DAEEFRLGQI CGLNIIIQVD
1201: DLEEVSDFYQ KKGFFSELIS LMESGLGLER AHMGIFTELG VLYARYRYEK LIEHIKLFST RLNIPKLIRA CDEQQQWQEL TYLYIQYAEF DNAATTVMNH
1301: SPEAWEHVQF KDIVGKVANV EVYYKAVHFY LLEHPDMIND LLNVLALRLD HTRVVDIMRK AGQLRLVKPY MVAVQSNNVS AVNEALNEIY VEEEDYERLR
1401: ESIDLHDSFD QIGLAQKIEK HELVEMRRVA AYIYKKAGKW KQSIALSKKD NLYKDCMETA SQSGDHDLAE QLLVYFIEQG KKECFATCLF VCYDLIRPDV
1501: ALELAWMNNM VDFAYPYLLQ VMREYTGKVD EIIKDKLEAQ KEAKAKEQEE KEVVSQQNMY AQLLPNALPA PPMQLALTAP QPMGGMPLMP PFGMPPMGGY
0101: AKAKLKSHQM PDQVEFWKWI TPKMLGLVTQ NSVYHWSIEG CDSEPVKMFD RATKLENNQI INYKCSPNEK WLVLIGIAPG PPERPQLVKG NMQLFSVDQQ
0201: QTQSLDAHAA SFAQFKVPGN ENPSTLISFA TKSFNAGQIT SNVHVIELGA LPGKASFTKK KADLSFLPDF ADDFPVAMQI SNKFSLIYVI TKLGLLFVYD
0301: LETASPIYRN RISTDPIFLT SEASSVGGFY AINRRGQVLL ATVNEATIIP FISGPLKNLE LAVNLAKRGN LPGAEDLVVK RFKELFDQTK YKEAAELASE
0401: SPQGILRTPD TVAKFQSVPV QAGQTPPLLQ YFGTLLTKGK LNSYESLELS RLVVNQNKKN LLKNWLEEDK LECSEELGDL VKTLDNDLAL EIYIKAQTSP
0501: KVVAALAEKR EFDNIIIYSE KVKYTPDYLF LLQTILRTDP QGAGEFAVKM SHMKGGCPLD INTITDLFLQ RNLIREATAF LLDVLKPNLP EHAFLQTKVL
0601: EINLVTFPNV ADAILAGSMF SHYDRPRVAQ LCEKAGLYIQ SLKHYSELND IKRVIVNTHA IEPQALVDFL GTLSSDWVME CMKELLIVNP RGNLQIIVQA
0701: CKEYCEQLGV DACIKLFEQF KSYEGLYFFL GSYVRMSEDP EVHFKYIEAS AKTGQIKEVE RVTRESNFYD AEKTKNFLME AKLPDARPLI NVCDRFGFVP
0801: DLTHYLYINN MLRYIEGYAQ KVNPGSAPLV VGQLLDDECP EDFIKGLIIS VRSLLPVEPL VEECEKRNRL RLLTHFLEHL VTEGSQDVHV HNALGKIIID
0901: SNNNPELSSA VKAFMTADLP HELIELLEKI VLQNSDFSGN INLQNLLILT AVKADTSRVM DYVNRLENFD GPVVGEMAVE AQLFEEAFAI FKKFNLNVEA
1001: VNVLLDNIKS IERAAEFAFR VEEDSVWSQV AKAQLREGLV SDAIESFIRA EDATHFLEMI RVAEDANVYD DMVSYLLMVR NKVKEVKVDS ELIYAYAKID
1101: RLGEVEDFIL MPNVANLQIV GDRMYDEAMY EAAKIVYAFV SNWGKLAVTL VKLQQFQGAV DAARKASSAK TWKEVCFACV DAEEFRLGQI CGLNIIIQVD
1201: DLEEVSDFYQ KKGFFSELIS LMESGLGLER AHMGIFTELG VLYARYRYEK LIEHIKLFST RLNIPKLIRA CDEQQQWQEL TYLYIQYAEF DNAATTVMNH
1301: SPEAWEHVQF KDIVGKVANV EVYYKAVHFY LLEHPDMIND LLNVLALRLD HTRVVDIMRK AGQLRLVKPY MVAVQSNNVS AVNEALNEIY VEEEDYERLR
1401: ESIDLHDSFD QIGLAQKIEK HELVEMRRVA AYIYKKAGKW KQSIALSKKD NLYKDCMETA SQSGDHDLAE QLLVYFIEQG KKECFATCLF VCYDLIRPDV
1501: ALELAWMNNM VDFAYPYLLQ VMREYTGKVD EIIKDKLEAQ KEAKAKEQEE KEVVSQQNMY AQLLPNALPA PPMQLALTAP QPMGGMPLMP PFGMPPMGGY
0001: MAAANAPITM KEVLTLPSIG INQQFITFTN VTMESDKYIC VRETSPQNSV VIIDMNMPMQ PLRRPITADS ALMNPNSKIL ALKAQVPGTT QDHLQIFNIE
0101: AKAKLKSHQM PEQVVFWKWI TPKMLGLVTQ NSVYHWSIEG DSEPVKMFDR TANLANNQII NYKCSPNEKW LVLIGIAPGS PERQQLVKGN MQLFSVDQQR
0201: SQALEAHAAS FAQFKVPGNE NPSILISFAS KSFNAGQITS KLHVIELGAQ PGKPSFTKKQ ADLFFPPDFA DDFPVAMQVS HKFNLIYVIT KLGLLFVYDL
0301: ETASAIYRNR ISPDPIFLTS EASSVGGFYA INRRGQVLLA TVNEATIIPF ISGQLNNLEL AVNLAKRGNL PGAENLVVQR FQELFAQTKY KEAAELAAES
0401: PQGILRTPDT VAKFQSVPVQ AGQTPPLLQY FGTLLTRGKL NSYESLELSR LVVNQNKKNL LENWLAEDKL ECSEELGDLV KTVDNDLALK IYIKARATPK
0501: VVAAFAERRE FDKILIYSKQ VGYTPDYLFL LQTILRTDPQ GAVNFALMMS QMEGGSPVDY NTITDLFLQR NLIREATSFL LDVLKPNLPE HAFLQTKVLE
0601: INLVTFPNVA DAVLANGMFT HYDRPRIAQL CEKAGLYIQS LKHYSELPDI KRVIVNTHAI EPQALVEFFG TLSSEWAMEC MKDLLLVNLR GNLQIIVQAC
0701: KEYCEQLGVD ACIKLFEQFK SYEGLYFFLG SYLSMSEDPE IHFKYIEAAA KTGQIKEVER VTRESNFYDA EKTKNFLMEA KLPDARPLIN VCDRFSFVPD
0801: LTHYLYTNNM LRYIEGYVQK VNPGNAPLVV GQLLDDECPE DFIKGLILSV RSLLPVEPLV EECEKRNRLR LLTQFLEHLV SEGSQDVHVH NALGKIIIDS
0901: NNNPEHFLTT NPYYDSKVVG KYCEKRDPTL AVVAYRRGQC DEELINVTNK NSLFKLQARY VVERMDGDLW DKVLDENNDY RRQLIDQVVS TALPESKSPE
1001: QVSAAVKAFM TADLPHELIE LLEKIVLQNS AFSGNFNLQN LLILTAIKAD PSRVMDYINR LDNFDGPAVG EVAVEAQLYE EAFAIFKKFN LNVQAVNVLL
1101: DNVRSIERAV EFAFRVEEDS VWSQVAKAQL REGLVSDAIE SFIRADDATH FLEVIRVSED TDVYDDLVKY LLMVRQKVKE PKVDSELIYA YAKIDRLGEI
1201: EEFILMPNVA NLQHVGDRLY DEALYEAAKI IYAFISNWGK LAVTLVKLQQ FQGAVDAARK ANSAKTWKEV CFACVDAEEF RLAQICGLNI IIQVDDLEEV
1301: SEYYQNRGCF NELISLMESG LGLERAHMGI FTELGVLYAR YRYEKLMEHI KLFSTRLNIP KLIRACDEQQ HWQELTYLYI QYDEFDNAAT TVMNHSPEAW
1401: EHMQFKDIVA KVANVELYYK AVHFYLQEHP DIINDLLNVL ALRLDHTRVV DIMRKAGHLR LIKPYMIAVQ SNNVSAVNEA LNEIYVEEED YDRLRESIDL
1501: HDSFDQIGLA QKIEKHELVE MRRVAAYIYK KAGRWKQSIA LSKKDNMYKD CMETASQSGE HELAEQLLVY FIEQGKKECF ATCLFVCYDL IRPDVALELA
1601: WINNMMDFAF PYLLQFIREY SGKVDELIKD KLEAQKEVKA KEQEEKDVIS QQNMYAQMLP LALPAPPMPG MGGGGGYGPP PQMGGMPGMP PMPPYGMPPM
1701: GGY
0101: AKAKLKSHQM PEQVVFWKWI TPKMLGLVTQ NSVYHWSIEG DSEPVKMFDR TANLANNQII NYKCSPNEKW LVLIGIAPGS PERQQLVKGN MQLFSVDQQR
0201: SQALEAHAAS FAQFKVPGNE NPSILISFAS KSFNAGQITS KLHVIELGAQ PGKPSFTKKQ ADLFFPPDFA DDFPVAMQVS HKFNLIYVIT KLGLLFVYDL
0301: ETASAIYRNR ISPDPIFLTS EASSVGGFYA INRRGQVLLA TVNEATIIPF ISGQLNNLEL AVNLAKRGNL PGAENLVVQR FQELFAQTKY KEAAELAAES
0401: PQGILRTPDT VAKFQSVPVQ AGQTPPLLQY FGTLLTRGKL NSYESLELSR LVVNQNKKNL LENWLAEDKL ECSEELGDLV KTVDNDLALK IYIKARATPK
0501: VVAAFAERRE FDKILIYSKQ VGYTPDYLFL LQTILRTDPQ GAVNFALMMS QMEGGSPVDY NTITDLFLQR NLIREATSFL LDVLKPNLPE HAFLQTKVLE
0601: INLVTFPNVA DAVLANGMFT HYDRPRIAQL CEKAGLYIQS LKHYSELPDI KRVIVNTHAI EPQALVEFFG TLSSEWAMEC MKDLLLVNLR GNLQIIVQAC
0701: KEYCEQLGVD ACIKLFEQFK SYEGLYFFLG SYLSMSEDPE IHFKYIEAAA KTGQIKEVER VTRESNFYDA EKTKNFLMEA KLPDARPLIN VCDRFSFVPD
0801: LTHYLYTNNM LRYIEGYVQK VNPGNAPLVV GQLLDDECPE DFIKGLILSV RSLLPVEPLV EECEKRNRLR LLTQFLEHLV SEGSQDVHVH NALGKIIIDS
0901: NNNPEHFLTT NPYYDSKVVG KYCEKRDPTL AVVAYRRGQC DEELINVTNK NSLFKLQARY VVERMDGDLW DKVLDENNDY RRQLIDQVVS TALPESKSPE
1001: QVSAAVKAFM TADLPHELIE LLEKIVLQNS AFSGNFNLQN LLILTAIKAD PSRVMDYINR LDNFDGPAVG EVAVEAQLYE EAFAIFKKFN LNVQAVNVLL
1101: DNVRSIERAV EFAFRVEEDS VWSQVAKAQL REGLVSDAIE SFIRADDATH FLEVIRVSED TDVYDDLVKY LLMVRQKVKE PKVDSELIYA YAKIDRLGEI
1201: EEFILMPNVA NLQHVGDRLY DEALYEAAKI IYAFISNWGK LAVTLVKLQQ FQGAVDAARK ANSAKTWKEV CFACVDAEEF RLAQICGLNI IIQVDDLEEV
1301: SEYYQNRGCF NELISLMESG LGLERAHMGI FTELGVLYAR YRYEKLMEHI KLFSTRLNIP KLIRACDEQQ HWQELTYLYI QYDEFDNAAT TVMNHSPEAW
1401: EHMQFKDIVA KVANVELYYK AVHFYLQEHP DIINDLLNVL ALRLDHTRVV DIMRKAGHLR LIKPYMIAVQ SNNVSAVNEA LNEIYVEEED YDRLRESIDL
1501: HDSFDQIGLA QKIEKHELVE MRRVAAYIYK KAGRWKQSIA LSKKDNMYKD CMETASQSGE HELAEQLLVY FIEQGKKECF ATCLFVCYDL IRPDVALELA
1601: WINNMMDFAF PYLLQFIREY SGKVDELIKD KLEAQKEVKA KEQEEKDVIS QQNMYAQMLP LALPAPPMPG MGGGGGYGPP PQMGGMPGMP PMPPYGMPPM
1701: GGY
Arabidopsis Description
CHC2Clathrin heavy chain 2 [Source:UniProtKB/Swiss-Prot;Acc:Q0WLB5]
SUBAcon: [plasma membrane,plastid,cytosol]
SUBAcon: [plasma membrane,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.