Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX74011 | Canola | cytosol | 99.4 | 99.23 |
| CDY36318 | Canola | cytosol | 42.63 | 97.01 |
| CDY36301 | Canola | cytosol | 97.19 | 96.9 |
| CDY00724 | Canola | cytosol | 97.13 | 96.85 |
| CDX73889 | Canola | cytosol | 97.07 | 96.61 |
| CDY00997 | Canola | extracellular | 97.01 | 95.2 |
| CDY08549 | Canola | cytosol | 87.34 | 94.69 |
| CDY36317 | Canola | cytosol | 14.09 | 93.28 |
| KRG97711 | Soybean | endoplasmic reticulum, nucleus | 91.34 | 90.0 |
| KRH31163 | Soybean | endoplasmic reticulum | 91.22 | 89.88 |
| KRH14933 | Soybean | nucleus | 90.99 | 89.65 |
| KRH73205 | Soybean | nucleus | 91.1 | 89.4 |
| KXG22761 | Sorghum | plastid | 90.09 | 88.25 |
| EES07849 | Sorghum | plastid | 90.03 | 88.24 |
| CDY27997 | Canola | cytosol | 84.24 | 88.19 |
| TraesCS5D01G158800.1 | Wheat | plastid | 89.31 | 87.59 |
| TraesCS5A01G153500.1 | Wheat | golgi, unclear | 89.25 | 87.53 |
| TraesCS5B01G152300.1 | Wheat | unclear | 89.25 | 87.53 |
| CDY35984 | Canola | cytosol | 83.88 | 87.48 |
| TraesCS4A01G182300.1 | Wheat | extracellular, golgi | 89.37 | 87.29 |
| TraesCS4D01G130900.1 | Wheat | golgi, unclear | 89.31 | 87.23 |
| Os11t0104900-00 | Rice | plasma membrane | 36.36 | 87.12 |
| TraesCS4B01G136100.2 | Wheat | golgi, unclear | 89.19 | 86.26 |
| Os12t0104766-00 | Rice | plasma membrane | 29.73 | 86.16 |
| Os11t0104866-00 | Rice | plasma membrane | 29.61 | 85.81 |
| HORVU4Hr1G024710.4 | Barley | plastid | 89.19 | 83.89 |
| HORVU5Hr1G048010.1 | Barley | plastid | 89.01 | 82.7 |
| CDY22157 | Canola | cytosol | 3.82 | 82.05 |
| CDY22158 | Canola | cytosol | 8.96 | 78.95 |
| Os12t0104800-01 | Rice | cytosol | 5.01 | 68.85 |
| CDY06504 | Canola | extracellular, mitochondrion | 2.27 | 40.43 |
Protein Annotations
| Gene3D:1.25.40.10 | Gene3D:1.25.40.730 | Gene3D:2.130.10.110 | MapMan:22.1.1.1 | GO:A0A078F4J2 | UniProt:A0A078F4J2 |
| InterPro:ARM-type_fold | EnsemblPlants:CDY07954 | ProteinID:CDY07954 | ProteinID:CDY07954.1 | InterPro:Clathrin_H-chain/VPS_repeat | InterPro:Clathrin_H-chain_N |
| InterPro:Clathrin_H-chain_linker_core | InterPro:Clathrin_H-chain_propeller_rpt | InterPro:Clathrin_heavy_chain | ncoils:Coil | GO:GO:0003674 | GO:GO:0005198 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005794 | GO:GO:0005886 | GO:GO:0005905 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0016192 | GO:GO:0030130 | GO:GO:0030132 |
| GO:GO:0030659 | GO:GO:0031410 | GO:GO:0032051 | GO:GO:0048268 | GO:GO:0071439 | EnsemblPlantsGene:GSBRNA2T00125164001 |
| InterPro:IPR000547 | InterPro:IPR011990 | InterPro:IPR016025 | PFAM:PF00637 | PFAM:PF01394 | PFAM:PF09268 |
| PFAM:PF13838 | PIRSF:PIRSF002290 | PFscan:PS50236 | PANTHER:PTHR10292 | PANTHER:PTHR10292:SF1 | SMART:SM00299 |
| SUPFAM:SSF48371 | SUPFAM:SSF50989 | InterPro:TPR-like_helical_dom_sf | UniParc:UPI0004EEAE56 | SEG:seg | : |
Description
BnaC03g35690DClathrin heavy chain [Source:UniProtKB/TrEMBL;Acc:A0A078F4J2]
Coordinates
chrLK031982:+:273873..282786
Molecular Weight (calculated)
189576.0 Da
IEP (calculated)
4.965
GRAVY (calculated)
-0.132
Length
1675 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAAANAPITM KEVLTLPSVG INQQFITFTN VTMESDKYIC VRETAPQNSV VIIDMSMPMQ PLRRPITADS ALMNPDSRIL ALKAQVPGTT QDHLQIFNIE
0101: AKAKLKSHQM PEQVAFWKWI TLKMLGLVTQ NSVYHWSIEG CDSEPVKMFD RTANLANNQI INYKCSPNEK WLVLIGIAPG PPERAQLVKG NMQLFSVDQQ
0201: RSQALEAHAA SFAQFKVPGN ENPSILISFA SKSFNAGQIT SKLHVIELGA QPGKPSFTKK QADLFFPPDF ADDFPVAMQV SHKFSLIYVI TKLGLLFVYD
0301: LETASAIYRN RISPDPIFLT SEASSVGGFY AINRRGQVLL ATVNEATIIP FISGQLNNLE LAVNLAKRGN LRGAEELVVE RFKELFAQTK YKEAAELAAE
0401: SPQGILRTPD TVAKFQSVPV QAGQTPPLLQ YFGTLLTKGK LNSYESLELS RLVVNQNKKN LLENWLAEDK LECSEELGDL VKTVDNDLAL KIYIKARATP
0501: KVVAAFAERK EFDKILIYSK QVGYTPDYMF LLQTILRTDP QGAVNFALMM SQMEGGCPVD FNTITDLFLQ RNLIREATAF LLDVLKPNLP EHAFLQTKVL
0601: EINLVTFPNV ADAILANGMF SHYDRPRVAQ LCEKAGLFIQ SLKHYSELPD IKRVIVNTHA IEPQALVEFF GTLSSDWAME CMKDLLLVNL RGNLQIIVQA
0701: CKEYCEQLGV DACIKLFEQF KSYEGLYFFL GSYLSMSEDP EIHFKYIEAA AKTAKLPDAR PLINVCDRFG FVPDLTHYLY TNNMLRYIEG YVQKVNPGNA
0801: PLVVGQLLDD ECPEDFIKGL ILSVRSLLPV EPLVDECEKR NRLRLLTQFL EHLVSEGSQD VHVHNALGKI IIDSNNNPEH FLTTNPYYDS RVVGKYCEKR
0901: DPTLAVVAYR RGQCDEELVN VTNKNSLFKL QARYVVERMD GDLWDKVLME ENEYRRQLID QVVSTALPES QSPEQVSAAV KAFMTADLPH ELIELLEKIV
1001: LQNSAFSGNF NLQNLLILTA IKADPSRVMD YINRLDNFDG PAVGEVAVEA QLYEEAFAIF KKFNLNVQAV DVLLDNVKSI ERAVEFAFRV EEDSVWSQVA
1101: KAQLREGLVS DAIESFIRAE DATHFLEVIR ATEDANVYDD LVRYLLMVRQ KVKEPKVDSE LIYAYAKIDR LGEIEEFILM PNVANLPNVG DRLYDEALYE
1201: AAKIIYAFIS NWGKLAVTLV KLQQFQGAVD AARKANSAKT WKEVCFACVD AEEFRLAQIC GLNVIIQVDD LEEVSEFYQN RGCFNELISL MESGLGLERA
1301: HMGIFTELGV LYARYRYEKL MEHIKLFSTR LNIPKLIRAC DEQQHWQELT YLYIQYDEFD NAATTVMNHS PEAWEHMQFK DIVAKVANVE LYYKAVHFYL
1401: QEHPDLINDL LNVLALRLDH TRVVDIMRKA GQLRLIKPYM VAVQSNNVSA VNEALNEIYV EEEDYDRLRE SIDLHDSFDQ IGLAQKIEKH ELVEMRRVAA
1501: YIYKKAGRWK QSIALSKKDN MYKDCMETAS QSGEHDLAEQ LLVYFIEQGK KECFATCLFV CYDLIRPDVA LELAWINNML DFAFPYLLQF IREYSGKVDE
1601: LIKDKLEAQK EVKAKEQEDK DVMSQQNMYA QLLPLALPAP PMPGMGGGGG YGPPPPMGGG MPPMPPYGMP PMGGY
0101: AKAKLKSHQM PEQVAFWKWI TLKMLGLVTQ NSVYHWSIEG CDSEPVKMFD RTANLANNQI INYKCSPNEK WLVLIGIAPG PPERAQLVKG NMQLFSVDQQ
0201: RSQALEAHAA SFAQFKVPGN ENPSILISFA SKSFNAGQIT SKLHVIELGA QPGKPSFTKK QADLFFPPDF ADDFPVAMQV SHKFSLIYVI TKLGLLFVYD
0301: LETASAIYRN RISPDPIFLT SEASSVGGFY AINRRGQVLL ATVNEATIIP FISGQLNNLE LAVNLAKRGN LRGAEELVVE RFKELFAQTK YKEAAELAAE
0401: SPQGILRTPD TVAKFQSVPV QAGQTPPLLQ YFGTLLTKGK LNSYESLELS RLVVNQNKKN LLENWLAEDK LECSEELGDL VKTVDNDLAL KIYIKARATP
0501: KVVAAFAERK EFDKILIYSK QVGYTPDYMF LLQTILRTDP QGAVNFALMM SQMEGGCPVD FNTITDLFLQ RNLIREATAF LLDVLKPNLP EHAFLQTKVL
0601: EINLVTFPNV ADAILANGMF SHYDRPRVAQ LCEKAGLFIQ SLKHYSELPD IKRVIVNTHA IEPQALVEFF GTLSSDWAME CMKDLLLVNL RGNLQIIVQA
0701: CKEYCEQLGV DACIKLFEQF KSYEGLYFFL GSYLSMSEDP EIHFKYIEAA AKTAKLPDAR PLINVCDRFG FVPDLTHYLY TNNMLRYIEG YVQKVNPGNA
0801: PLVVGQLLDD ECPEDFIKGL ILSVRSLLPV EPLVDECEKR NRLRLLTQFL EHLVSEGSQD VHVHNALGKI IIDSNNNPEH FLTTNPYYDS RVVGKYCEKR
0901: DPTLAVVAYR RGQCDEELVN VTNKNSLFKL QARYVVERMD GDLWDKVLME ENEYRRQLID QVVSTALPES QSPEQVSAAV KAFMTADLPH ELIELLEKIV
1001: LQNSAFSGNF NLQNLLILTA IKADPSRVMD YINRLDNFDG PAVGEVAVEA QLYEEAFAIF KKFNLNVQAV DVLLDNVKSI ERAVEFAFRV EEDSVWSQVA
1101: KAQLREGLVS DAIESFIRAE DATHFLEVIR ATEDANVYDD LVRYLLMVRQ KVKEPKVDSE LIYAYAKIDR LGEIEEFILM PNVANLPNVG DRLYDEALYE
1201: AAKIIYAFIS NWGKLAVTLV KLQQFQGAVD AARKANSAKT WKEVCFACVD AEEFRLAQIC GLNVIIQVDD LEEVSEFYQN RGCFNELISL MESGLGLERA
1301: HMGIFTELGV LYARYRYEKL MEHIKLFSTR LNIPKLIRAC DEQQHWQELT YLYIQYDEFD NAATTVMNHS PEAWEHMQFK DIVAKVANVE LYYKAVHFYL
1401: QEHPDLINDL LNVLALRLDH TRVVDIMRKA GQLRLIKPYM VAVQSNNVSA VNEALNEIYV EEEDYDRLRE SIDLHDSFDQ IGLAQKIEKH ELVEMRRVAA
1501: YIYKKAGRWK QSIALSKKDN MYKDCMETAS QSGEHDLAEQ LLVYFIEQGK KECFATCLFV CYDLIRPDVA LELAWINNML DFAFPYLLQF IREYSGKVDE
1601: LIKDKLEAQK EVKAKEQEDK DVMSQQNMYA QLLPLALPAP PMPGMGGGGG YGPPPPMGGG MPPMPPYGMP PMGGY
0001: MAAANAPITM KEVLTLPSIG INQQFITFTN VTMESDKYIC VRETSPQNSV VIIDMNMPMQ PLRRPITADS ALMNPNSKIL ALKAQVPGTT QDHLQIFNIE
0101: AKAKLKSHQM PEQVVFWKWI TPKMLGLVTQ NSVYHWSIEG DSEPVKMFDR TANLANNQII NYKCSPNEKW LVLIGIAPGS PERQQLVKGN MQLFSVDQQR
0201: SQALEAHAAS FAQFKVPGNE NPSILISFAS KSFNAGQITS KLHVIELGAQ PGKPSFTKKQ ADLFFPPDFA DDFPVAMQVS HKFNLIYVIT KLGLLFVYDL
0301: ETASAIYRNR ISPDPIFLTS EASSVGGFYA INRRGQVLLA TVNEATIIPF ISGQLNNLEL AVNLAKRGNL PGAENLVVQR FQELFAQTKY KEAAELAAES
0401: PQGILRTPDT VAKFQSVPVQ AGQTPPLLQY FGTLLTRGKL NSYESLELSR LVVNQNKKNL LENWLAEDKL ECSEELGDLV KTVDNDLALK IYIKARATPK
0501: VVAAFAERRE FDKILIYSKQ VGYTPDYLFL LQTILRTDPQ GAVNFALMMS QMEGGSPVDY NTITDLFLQR NLIREATSFL LDVLKPNLPE HAFLQTKVLE
0601: INLVTFPNVA DAVLANGMFT HYDRPRIAQL CEKAGLYIQS LKHYSELPDI KRVIVNTHAI EPQALVEFFG TLSSEWAMEC MKDLLLVNLR GNLQIIVQAC
0701: KEYCEQLGVD ACIKLFEQFK SYEGLYFFLG SYLSMSEDPE IHFKYIEAAA KTGQIKEVER VTRESNFYDA EKTKNFLMEA KLPDARPLIN VCDRFSFVPD
0801: LTHYLYTNNM LRYIEGYVQK VNPGNAPLVV GQLLDDECPE DFIKGLILSV RSLLPVEPLV EECEKRNRLR LLTQFLEHLV SEGSQDVHVH NALGKIIIDS
0901: NNNPEHFLTT NPYYDSKVVG KYCEKRDPTL AVVAYRRGQC DEELINVTNK NSLFKLQARY VVERMDGDLW DKVLDENNDY RRQLIDQVVS TALPESKSPE
1001: QVSAAVKAFM TADLPHELIE LLEKIVLQNS AFSGNFNLQN LLILTAIKAD PSRVMDYINR LDNFDGPAVG EVAVEAQLYE EAFAIFKKFN LNVQAVNVLL
1101: DNVRSIERAV EFAFRVEEDS VWSQVAKAQL REGLVSDAIE SFIRADDATH FLEVIRVSED TDVYDDLVKY LLMVRQKVKE PKVDSELIYA YAKIDRLGEI
1201: EEFILMPNVA NLQHVGDRLY DEALYEAAKI IYAFISNWGK LAVTLVKLQQ FQGAVDAARK ANSAKTWKEV CFACVDAEEF RLAQICGLNI IIQVDDLEEV
1301: SEYYQNRGCF NELISLMESG LGLERAHMGI FTELGVLYAR YRYEKLMEHI KLFSTRLNIP KLIRACDEQQ HWQELTYLYI QYDEFDNAAT TVMNHSPEAW
1401: EHMQFKDIVA KVANVELYYK AVHFYLQEHP DIINDLLNVL ALRLDHTRVV DIMRKAGHLR LIKPYMIAVQ SNNVSAVNEA LNEIYVEEED YDRLRESIDL
1501: HDSFDQIGLA QKIEKHELVE MRRVAAYIYK KAGRWKQSIA LSKKDNMYKD CMETASQSGE HELAEQLLVY FIEQGKKECF ATCLFVCYDL IRPDVALELA
1601: WINNMMDFAF PYLLQFIREY SGKVDELIKD KLEAQKEVKA KEQEEKDVIS QQNMYAQMLP LALPAPPMPG MGGGGGYGPP PQMGGMPGMP PMPPYGMPPM
1701: GGY
0101: AKAKLKSHQM PEQVVFWKWI TPKMLGLVTQ NSVYHWSIEG DSEPVKMFDR TANLANNQII NYKCSPNEKW LVLIGIAPGS PERQQLVKGN MQLFSVDQQR
0201: SQALEAHAAS FAQFKVPGNE NPSILISFAS KSFNAGQITS KLHVIELGAQ PGKPSFTKKQ ADLFFPPDFA DDFPVAMQVS HKFNLIYVIT KLGLLFVYDL
0301: ETASAIYRNR ISPDPIFLTS EASSVGGFYA INRRGQVLLA TVNEATIIPF ISGQLNNLEL AVNLAKRGNL PGAENLVVQR FQELFAQTKY KEAAELAAES
0401: PQGILRTPDT VAKFQSVPVQ AGQTPPLLQY FGTLLTRGKL NSYESLELSR LVVNQNKKNL LENWLAEDKL ECSEELGDLV KTVDNDLALK IYIKARATPK
0501: VVAAFAERRE FDKILIYSKQ VGYTPDYLFL LQTILRTDPQ GAVNFALMMS QMEGGSPVDY NTITDLFLQR NLIREATSFL LDVLKPNLPE HAFLQTKVLE
0601: INLVTFPNVA DAVLANGMFT HYDRPRIAQL CEKAGLYIQS LKHYSELPDI KRVIVNTHAI EPQALVEFFG TLSSEWAMEC MKDLLLVNLR GNLQIIVQAC
0701: KEYCEQLGVD ACIKLFEQFK SYEGLYFFLG SYLSMSEDPE IHFKYIEAAA KTGQIKEVER VTRESNFYDA EKTKNFLMEA KLPDARPLIN VCDRFSFVPD
0801: LTHYLYTNNM LRYIEGYVQK VNPGNAPLVV GQLLDDECPE DFIKGLILSV RSLLPVEPLV EECEKRNRLR LLTQFLEHLV SEGSQDVHVH NALGKIIIDS
0901: NNNPEHFLTT NPYYDSKVVG KYCEKRDPTL AVVAYRRGQC DEELINVTNK NSLFKLQARY VVERMDGDLW DKVLDENNDY RRQLIDQVVS TALPESKSPE
1001: QVSAAVKAFM TADLPHELIE LLEKIVLQNS AFSGNFNLQN LLILTAIKAD PSRVMDYINR LDNFDGPAVG EVAVEAQLYE EAFAIFKKFN LNVQAVNVLL
1101: DNVRSIERAV EFAFRVEEDS VWSQVAKAQL REGLVSDAIE SFIRADDATH FLEVIRVSED TDVYDDLVKY LLMVRQKVKE PKVDSELIYA YAKIDRLGEI
1201: EEFILMPNVA NLQHVGDRLY DEALYEAAKI IYAFISNWGK LAVTLVKLQQ FQGAVDAARK ANSAKTWKEV CFACVDAEEF RLAQICGLNI IIQVDDLEEV
1301: SEYYQNRGCF NELISLMESG LGLERAHMGI FTELGVLYAR YRYEKLMEHI KLFSTRLNIP KLIRACDEQQ HWQELTYLYI QYDEFDNAAT TVMNHSPEAW
1401: EHMQFKDIVA KVANVELYYK AVHFYLQEHP DIINDLLNVL ALRLDHTRVV DIMRKAGHLR LIKPYMIAVQ SNNVSAVNEA LNEIYVEEED YDRLRESIDL
1501: HDSFDQIGLA QKIEKHELVE MRRVAAYIYK KAGRWKQSIA LSKKDNMYKD CMETASQSGE HELAEQLLVY FIEQGKKECF ATCLFVCYDL IRPDVALELA
1601: WINNMMDFAF PYLLQFIREY SGKVDELIKD KLEAQKEVKA KEQEEKDVIS QQNMYAQMLP LALPAPPMPG MGGGGGYGPP PQMGGMPGMP PMPPYGMPPM
1701: GGY
Arabidopsis Description
CHC2Clathrin heavy chain 2 [Source:UniProtKB/Swiss-Prot;Acc:Q0WLB5]
SUBAcon: [plasma membrane,plastid,cytosol]
SUBAcon: [plasma membrane,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.