Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra029698.1-P | Field mustard | cytosol | 91.16 | 98.99 |
| CDY27997 | Canola | cytosol | 96.14 | 96.5 |
| CDY36318 | Canola | cytosol | 40.41 | 88.18 |
| CDY08549 | Canola | cytosol | 81.88 | 85.11 |
| CDY07954 | Canola | cytosol | 87.48 | 83.88 |
| CDX74011 | Canola | cytosol | 87.42 | 83.67 |
| CDY36301 | Canola | cytosol | 87.05 | 83.21 |
| CDY00997 | Canola | extracellular | 88.42 | 83.19 |
| CDY00724 | Canola | cytosol | 86.92 | 83.1 |
| CDX73889 | Canola | cytosol | 86.92 | 82.95 |
| Os11t0104900-00 | Rice | plasma membrane | 35.49 | 81.55 |
| CDY22158 | Canola | cytosol | 9.59 | 81.05 |
| CDY36317 | Canola | cytosol | 12.7 | 80.63 |
| Os12t0104766-00 | Rice | plasma membrane | 28.95 | 80.45 |
| KRG97711 | Soybean | endoplasmic reticulum, nucleus | 84.81 | 80.12 |
| KRH31163 | Soybean | endoplasmic reticulum | 84.74 | 80.06 |
| Os11t0104866-00 | Rice | plasma membrane | 28.77 | 79.93 |
| KRH14933 | Soybean | nucleus | 84.18 | 79.53 |
| KRH73205 | Soybean | nucleus | 84.25 | 79.26 |
| EES07849 | Sorghum | plastid | 83.25 | 78.23 |
| KXG22761 | Sorghum | plastid | 83.19 | 78.13 |
| TraesCS5D01G158800.1 | Wheat | plastid | 82.88 | 77.93 |
| TraesCS5A01G153500.1 | Wheat | golgi, unclear | 82.81 | 77.87 |
| TraesCS5B01G152300.1 | Wheat | unclear | 82.81 | 77.87 |
| TraesCS4A01G182300.1 | Wheat | extracellular, golgi | 82.94 | 77.67 |
| TraesCS4D01G130900.1 | Wheat | golgi, unclear | 82.81 | 77.55 |
| TraesCS4B01G136100.2 | Wheat | golgi, unclear | 82.81 | 76.79 |
| CDY22157 | Canola | cytosol | 3.67 | 75.64 |
| HORVU4Hr1G024710.4 | Barley | plastid | 82.69 | 74.56 |
| HORVU5Hr1G048010.1 | Barley | plastid | 82.63 | 73.6 |
| Os12t0104800-01 | Rice | cytosol | 4.48 | 59.02 |
| CDY06504 | Canola | extracellular, mitochondrion | 2.43 | 41.49 |
Protein Annotations
| Gene3D:1.25.40.10 | Gene3D:1.25.40.730 | Gene3D:2.130.10.110 | MapMan:22.1.1.1 | GO:A0A078HF00 | UniProt:A0A078HF00 |
| InterPro:ARM-type_fold | EnsemblPlants:CDY35984 | ProteinID:CDY35984 | ProteinID:CDY35984.1 | InterPro:Clathrin_H-chain/VPS_repeat | InterPro:Clathrin_H-chain_N |
| InterPro:Clathrin_H-chain_linker_core | InterPro:Clathrin_H-chain_propeller_rpt | InterPro:Clathrin_heavy_chain | ncoils:Coil | GO:GO:0003674 | GO:GO:0005198 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005794 | GO:GO:0005886 | GO:GO:0005905 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0016192 | GO:GO:0030130 | GO:GO:0030132 |
| GO:GO:0030659 | GO:GO:0031410 | GO:GO:0032051 | GO:GO:0048268 | GO:GO:0071439 | EnsemblPlantsGene:GSBRNA2T00059544001 |
| InterPro:IPR000547 | InterPro:IPR011990 | InterPro:IPR016025 | PFAM:PF00637 | PFAM:PF01394 | PFAM:PF09268 |
| PFAM:PF13838 | PIRSF:PIRSF002290 | PFscan:PS50236 | PANTHER:PTHR10292 | PANTHER:PTHR10292:SF1 | SMART:SM00299 |
| SUPFAM:SSF48371 | SUPFAM:SSF50989 | InterPro:TPR-like_helical_dom_sf | UniParc:UPI0004EEE419 | SEG:seg | : |
Description
BnaA05g29660DClathrin heavy chain [Source:UniProtKB/TrEMBL;Acc:A0A078HF00]
Coordinates
chrLK032364:-:290997..298997
Molecular Weight (calculated)
181663.0 Da
IEP (calculated)
4.931
GRAVY (calculated)
-0.111
Length
1606 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAAPNAPITL KEVLTLPSVG INQQFITFTN VTMESDKYIC VRETSPQNSV VIIDMNMPMQ PLRRPITADS ALMNPNSRIL ALKAQVPGTT QDYLQMFNIE
0101: AKAKLKSHQM PDQVEFWKWI TPKMLGLVTQ YSVYHWSIEG CDSEPVKMFD RATKLENNQI INYKCSPNEK WLVLIGITPG PPERPQLVKG NMQLFSVDQQ
0201: QTQSLDAHAA SFAQFKVPGN ENTLISFATK SFNAGQITSN VHVIELGALP GKASFAKKKA DLSFLPDFAD DFPVAMQISN KFSLIYVITK LGLLFVYDLE
0301: TASPIYRNRI STDPIFLTSE ASSVGGFYAI NRRGQVLLAT VNEATIIPFI SGPLKNLELA VNLAKRGNLP GADDLVVKRF KELFDQTKYK EAAELAAESP
0401: QGILRTPDTV SKFQSVPVQA GQTPPLLQYF GTLLTKGKLN SYESLELSRL VVNQNKKNLL KNWLEEDKLE CSEELGDLVK TLDNDLALEI YIKAQTSPKV
0501: VVALVEKREF DNILIYSEKV KYTPDYLFLL QTILRTDPQG AGEFAVKMSQ MKGGCPLDIN TITDLFLQRN LIREATAFLL DVLKPNLPEH AFLQTKVLEI
0601: NLVTFPNVAE AILAGSMFSH YDRPRVAQLC EKAGLYIQSL KHYSDLNDIK RVIVNTHAIE PQALVDFLGT LSSDWAMECM KELLIVNPRG NLQIIVQACK
0701: EYCEQLGVDA CIKLFEQFKS YEGLYFFLGS YVRMSEDPDV HFKYIEASAK TGQLKEVERV TRESNFYDAE KTKNFLMEAK LPDARPLINV CDRFGFVPDL
0801: THYLYINNML RYIEGYVQKV NPGSAPLVVG QLLDDECPED FIKGLIISVR SLLPVETLVE ECEKRNRLRL LTQFLEHLVT EGSQDVHVHN ALGKIIIDSN
0901: NNPEQQVSSA VKAFMTADLP HELIELLEKI VLQNSDFSGN INLQNLLILT AVKADPSRVM DYVNRLENFD GPVVGEMAVE AQLFEEAFAI FKKFNLNVEA
1001: VNVLLDNVKS IERAAEFALR VEEDSVWSQV AKAQLREGLV SDAIESFIRA EDATQFLEVI RVAEDANVYD DMVSYLLMVR NKVKEVKVDS ELLYAYAKIG
1101: RLGEVEDFIL MPNVANLQTV GDRLYDEAMY EAAKIVYAFV SNWGKLAVTL VKLQQFQGAV DAARKASSAK TWKEVCFACV DAEEFRLAQI CGLNIIIQVD
1201: DLEEVSEFYQ NKGFFNELIS LMESGLGLER AHMGIFTELG VLYARYRYEK LIEHIKLFST RLNIPKLIRA CDEQQHWQEL TYLYIQYAEF DNAATTVMNH
1301: SPEAWEHVQF KDIVGKVANV EVYYKAVHFY LLEHPDIIND LLNVLALRLD HTRVVDIMRK AGHLRLIKPY MVAVQSNNVT AVNEALNEIY VEEEDYERLR
1401: ESIDLHDSFD QIGLAQKIEK HELVEMRRVA AYIYKKAGKW KQSIALSKKD NLYKDCMETA SQSGDHDLAE QLLVYFIEQG KKESFATCLF VCYDLIRPDV
1501: ALELAWINNI IDLAFPYLLQ VMREYTGKVD EIIKDKLEAQ KEAKAKEQEE KEVMSQQNMY AQLLPNALPA PSMLLALPAP PMQMGGMPPM PMGGMPPFGM
1601: PPMGGY
0101: AKAKLKSHQM PDQVEFWKWI TPKMLGLVTQ YSVYHWSIEG CDSEPVKMFD RATKLENNQI INYKCSPNEK WLVLIGITPG PPERPQLVKG NMQLFSVDQQ
0201: QTQSLDAHAA SFAQFKVPGN ENTLISFATK SFNAGQITSN VHVIELGALP GKASFAKKKA DLSFLPDFAD DFPVAMQISN KFSLIYVITK LGLLFVYDLE
0301: TASPIYRNRI STDPIFLTSE ASSVGGFYAI NRRGQVLLAT VNEATIIPFI SGPLKNLELA VNLAKRGNLP GADDLVVKRF KELFDQTKYK EAAELAAESP
0401: QGILRTPDTV SKFQSVPVQA GQTPPLLQYF GTLLTKGKLN SYESLELSRL VVNQNKKNLL KNWLEEDKLE CSEELGDLVK TLDNDLALEI YIKAQTSPKV
0501: VVALVEKREF DNILIYSEKV KYTPDYLFLL QTILRTDPQG AGEFAVKMSQ MKGGCPLDIN TITDLFLQRN LIREATAFLL DVLKPNLPEH AFLQTKVLEI
0601: NLVTFPNVAE AILAGSMFSH YDRPRVAQLC EKAGLYIQSL KHYSDLNDIK RVIVNTHAIE PQALVDFLGT LSSDWAMECM KELLIVNPRG NLQIIVQACK
0701: EYCEQLGVDA CIKLFEQFKS YEGLYFFLGS YVRMSEDPDV HFKYIEASAK TGQLKEVERV TRESNFYDAE KTKNFLMEAK LPDARPLINV CDRFGFVPDL
0801: THYLYINNML RYIEGYVQKV NPGSAPLVVG QLLDDECPED FIKGLIISVR SLLPVETLVE ECEKRNRLRL LTQFLEHLVT EGSQDVHVHN ALGKIIIDSN
0901: NNPEQQVSSA VKAFMTADLP HELIELLEKI VLQNSDFSGN INLQNLLILT AVKADPSRVM DYVNRLENFD GPVVGEMAVE AQLFEEAFAI FKKFNLNVEA
1001: VNVLLDNVKS IERAAEFALR VEEDSVWSQV AKAQLREGLV SDAIESFIRA EDATQFLEVI RVAEDANVYD DMVSYLLMVR NKVKEVKVDS ELLYAYAKIG
1101: RLGEVEDFIL MPNVANLQTV GDRLYDEAMY EAAKIVYAFV SNWGKLAVTL VKLQQFQGAV DAARKASSAK TWKEVCFACV DAEEFRLAQI CGLNIIIQVD
1201: DLEEVSEFYQ NKGFFNELIS LMESGLGLER AHMGIFTELG VLYARYRYEK LIEHIKLFST RLNIPKLIRA CDEQQHWQEL TYLYIQYAEF DNAATTVMNH
1301: SPEAWEHVQF KDIVGKVANV EVYYKAVHFY LLEHPDIIND LLNVLALRLD HTRVVDIMRK AGHLRLIKPY MVAVQSNNVT AVNEALNEIY VEEEDYERLR
1401: ESIDLHDSFD QIGLAQKIEK HELVEMRRVA AYIYKKAGKW KQSIALSKKD NLYKDCMETA SQSGDHDLAE QLLVYFIEQG KKESFATCLF VCYDLIRPDV
1501: ALELAWINNI IDLAFPYLLQ VMREYTGKVD EIIKDKLEAQ KEAKAKEQEE KEVMSQQNMY AQLLPNALPA PSMLLALPAP PMQMGGMPPM PMGGMPPFGM
1601: PPMGGY
001: MTEGIRARGP RSSSVNSVPL ILDIEDFKGD FSFDALFGNL VNDLLPSFLD EEADSGDGHG NIAGVDGLTN GHLRGQSAPL SSAPFFPEVD GLLSLFKDAC
101: KELVDLRKQV DGRLNTLKKE VSTQDSKHRK TLTEIEKGVD GLFESFARLD GRISSVGQTA AKIGDHLQSA DAQRETASQT IDLIKYLMEF NGSPGDLMEL
201: SALFSDDSRV AEAASIAQKL RSFAEEDIGR QGASAAAGNA TPGRGLEVAV ANLQDYCNEL ENRLLSRFDA ASQRRDLSTM SECAKILSQF NRGTSAMQHY
301: VATRPMFIDV EVMNSDIRLV LGDHGSQPSP SNVARGLSAL FKEITDTVRK EAATITAVFP TPNEVMAILV QRVLEQRVTG ILDKILAKPS LMSPPPVQEG
401: GLLLYLRMLA VAYERTQELA KDLRAVGCGD LDVEDLTESL FSSHKDEYPE HERASLKQLY QAKMEELRAE SQQVSESSGT IGRSKGASIS SSLQQISVTV
501: VTDFVRWNEE AITRCTLFSS QPATLAANVK AIFTCLLDQV SVYITEGLER ARDSLSEAAA LRERFVLGRR VAAAAASAAE AAAAAGESSF KSFMVAVQRC
601: GSSVAIVQQY FANSISRLLL PVDGAHAASC EEMSTALSKA EAAAYKGLQQ CIETVMAEVD RLLSSEQKST DYRSTDDGIA SDHRPTNACI RVVAYLSRVL
701: ESAFTALEGL NKQAFLTELG NRLEKLLLTH WQKFTFNPSG GLRLKRDLNE YVGFVKSFGA PSVDEKFELL GIIANVFIVA PDSLPTLFEG SPSIRKDAQR
801: FIQLREDYKS AKLATKLSSL WPSLS
101: KELVDLRKQV DGRLNTLKKE VSTQDSKHRK TLTEIEKGVD GLFESFARLD GRISSVGQTA AKIGDHLQSA DAQRETASQT IDLIKYLMEF NGSPGDLMEL
201: SALFSDDSRV AEAASIAQKL RSFAEEDIGR QGASAAAGNA TPGRGLEVAV ANLQDYCNEL ENRLLSRFDA ASQRRDLSTM SECAKILSQF NRGTSAMQHY
301: VATRPMFIDV EVMNSDIRLV LGDHGSQPSP SNVARGLSAL FKEITDTVRK EAATITAVFP TPNEVMAILV QRVLEQRVTG ILDKILAKPS LMSPPPVQEG
401: GLLLYLRMLA VAYERTQELA KDLRAVGCGD LDVEDLTESL FSSHKDEYPE HERASLKQLY QAKMEELRAE SQQVSESSGT IGRSKGASIS SSLQQISVTV
501: VTDFVRWNEE AITRCTLFSS QPATLAANVK AIFTCLLDQV SVYITEGLER ARDSLSEAAA LRERFVLGRR VAAAAASAAE AAAAAGESSF KSFMVAVQRC
601: GSSVAIVQQY FANSISRLLL PVDGAHAASC EEMSTALSKA EAAAYKGLQQ CIETVMAEVD RLLSSEQKST DYRSTDDGIA SDHRPTNACI RVVAYLSRVL
701: ESAFTALEGL NKQAFLTELG NRLEKLLLTH WQKFTFNPSG GLRLKRDLNE YVGFVKSFGA PSVDEKFELL GIIANVFIVA PDSLPTLFEG SPSIRKDAQR
801: FIQLREDYKS AKLATKLSSL WPSLS
Arabidopsis Description
SEC10aExocyst complex component SEC10a [Source:UniProtKB/Swiss-Prot;Acc:X5JA13]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.