Subcellular Localization
min:
: max
Winner_takes_all: golgi, extracellular
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 1
- plastid 2
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| extracellular:
19786127
golgi: 23128297 |
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G130900.1 | Wheat | golgi, unclear | 99.77 | 99.77 |
| TraesCS4B01G136100.2 | Wheat | golgi, unclear | 99.36 | 98.38 |
| TraesCS5A01G153500.1 | Wheat | golgi, unclear | 97.73 | 98.13 |
| EES07849 | Sorghum | plastid | 97.14 | 97.48 |
| Os11t0104900-00 | Rice | plasma membrane | 39.65 | 97.28 |
| KXG22761 | Sorghum | plastid | 96.97 | 97.25 |
| Zm00001d044614_P086 | Maize | plastid | 96.91 | 97.02 |
| Zm00001d023218_P064 | Maize | plastid | 96.38 | 96.16 |
| HORVU4Hr1G024710.4 | Barley | plastid | 99.07 | 95.4 |
| Zm00001d005090_P106 | Maize | plastid | 95.86 | 94.54 |
| Os12t0104766-00 | Rice | plasma membrane | 31.6 | 93.77 |
| Os11t0104866-00 | Rice | plasma membrane | 31.55 | 93.6 |
| Zm00001d052308_P046 | Maize | cytosol, plastid | 93.7 | 92.3 |
| VIT_06s0004g06860.t01 | Wine grape | cytosol, plastid | 91.31 | 91.85 |
| GSMUA_Achr4P16770_001 | Banana | cytosol | 91.66 | 91.45 |
| GSMUA_Achr5P08520_001 | Banana | plastid | 91.02 | 91.39 |
| KRG97711 | Soybean | endoplasmic reticulum, nucleus | 90.32 | 91.12 |
| VIT_13s0067g01290.t01 | Wine grape | extracellular | 90.32 | 90.9 |
| Solyc06g051310.2.1 | Tomato | nucleus | 90.09 | 90.83 |
| KRH31163 | Soybean | endoplasmic reticulum | 90.03 | 90.82 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 71.95 | 90.8 |
| GSMUA_Achr4P18860_001 | Banana | cytosol | 85.42 | 90.49 |
| KRH14933 | Soybean | nucleus | 89.68 | 90.47 |
| KRH73205 | Soybean | nucleus | 89.91 | 90.33 |
| Solyc05g052510.2.1 | Tomato | nucleus, plastid | 89.85 | 90.33 |
| Os12t0104800-01 | Rice | cytosol | 6.41 | 90.16 |
| AT3G11130.1 | Thale cress | cytosol, plasma membrane | 89.45 | 89.97 |
| CDY36318 | Canola | cytosol | 38.6 | 89.95 |
| AT3G08530.1 | Thale cress | cytosol, plasma membrane, plastid | 89.27 | 89.9 |
| CDY00997 | Canola | extracellular | 89.27 | 89.69 |
| Solyc03g096000.2.1 | Tomato | nucleus | 88.86 | 89.54 |
| KRH28591 | Soybean | endoplasmic reticulum | 88.8 | 89.48 |
| CDY36301 | Canola | cytosol | 87.64 | 89.46 |
| CDY00724 | Canola | cytosol | 87.58 | 89.4 |
| Bra034864.1-P | Field mustard | cytosol | 77.55 | 89.38 |
| CDY07954 | Canola | cytosol | 87.29 | 89.37 |
| KRH76885 | Soybean | endoplasmic reticulum | 88.69 | 89.37 |
| CDX73889 | Canola | cytosol | 87.64 | 89.3 |
| Bra034166.1-P | Field mustard | cytosol | 75.28 | 89.16 |
| CDX74011 | Canola | cytosol | 87.23 | 89.15 |
| KRH72708 | Soybean | endoplasmic reticulum, mitochondrion | 88.63 | 89.1 |
| CDY22158 | Canola | cytosol | 9.85 | 88.95 |
| KRH17059 | Soybean | endoplasmic reticulum, nucleus | 88.16 | 88.78 |
| CDY08549 | Canola | cytosol | 79.94 | 88.74 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 87.23 | 87.74 |
| Bra001286.1-P | Field mustard | cytosol | 75.8 | 87.6 |
| GSMUA_Achr5P14240_001 | Banana | cytosol, plasma membrane, plastid | 88.63 | 87.21 |
| Bra001391.1-P | Field mustard | cytosol | 73.18 | 86.43 |
| CDY27997 | Canola | cytosol | 77.9 | 83.5 |
| Bra029698.1-P | Field mustard | cytosol | 71.6 | 83.03 |
| CDY35984 | Canola | cytosol | 77.67 | 82.94 |
| CDY36317 | Canola | cytosol | 11.78 | 79.84 |
| KRH12961 | Soybean | cytosol | 4.37 | 78.12 |
| KRH25762 | Soybean | cytosol | 4.2 | 75.0 |
| CDY22157 | Canola | cytosol | 3.38 | 74.36 |
| VIT_16s0115g00130.t01 | Wine grape | cytosol | 4.08 | 60.34 |
| VIT_03s0017g00210.t01 | Wine grape | cytosol, extracellular | 1.81 | 58.49 |
| VIT_19s0027g01340.t01 | Wine grape | cytosol | 8.8 | 49.19 |
| CDY06504 | Canola | extracellular, mitochondrion | 2.16 | 39.36 |
Protein Annotations
| Gene3D:1.25.40.10 | Gene3D:1.25.40.730 | Gene3D:2.130.10.110 | MapMan:22.1.1.1 | InterPro:ARM-type_fold | InterPro:Clathrin_H-chain/VPS_repeat |
| InterPro:Clathrin_H-chain_N | InterPro:Clathrin_H-chain_linker_core | InterPro:Clathrin_H-chain_propeller_rpt | InterPro:Clathrin_heavy_chain | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0005198 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005794 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0016192 | GO:GO:0030130 | GO:GO:0030132 |
| GO:GO:0032051 | GO:GO:0048268 | GO:GO:0071439 | InterPro:IPR000547 | InterPro:IPR011990 | InterPro:IPR016025 |
| PFAM:PF00637 | PFAM:PF01394 | PFAM:PF09268 | PFAM:PF13838 | PIRSF:PIRSF002290 | PFscan:PS50236 |
| PANTHER:PTHR10292 | PANTHER:PTHR10292:SF1 | SMART:SM00299 | SUPFAM:SSF48371 | SUPFAM:SSF50989 | InterPro:TPR-like_helical_dom_sf |
| EnsemblPlantsGene:TraesCS4A01G182300 | EnsemblPlants:TraesCS4A01G182300.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr4A:-:457826318..457836526
Molecular Weight (calculated)
194056.0 Da
IEP (calculated)
4.981
GRAVY (calculated)
-0.176
Length
1715 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAAANAPIAM REALTLTSLG IAPQFVTFTH VTMESDRYIC VRETSPQNSV VIIDMAMPSQ PLRRPITADS ALMNPNTRIL ALKAQIAGTT QDHLQIFNIE
0101: AKTKVKSHQM PEQVVFWKWI TPKLLGLVTQ TSVYHWSIEG DSEPTKMFDR TANLANNQII NYRCDPAEKW LVLIGIAPGA PERPQLVKGN MQLFSVDQQR
0201: SQALEAHAAS FATFKVPGNE NPSTLICFAS KATNAGQITS KLHVIELGAQ PGKPGFSKKQ ADLFFPPDFQ DDFPVAMQIS QKYGLVYVIT KLGLLFVYDL
0301: ETAAAVYRNR ISPDPIFLTA ESSTTGGFYA INRRGQVLHA TVNDATVVPF VSGQLNNLEL AVNLAKRANL PGAENLVVQR FQELFSQTKY KEAAELAAES
0401: PQGLLRTPET VAKFQSVPVQ AGQTPPLLQY FGTLLTRGKL NAYESLELSR LVVNQNKKNL LENWLAEDKL ECSEELGDLV KTVDNDLALK IYIKARATPK
0501: VVAAFAERRE FDKILIYSKQ VGYTPDYLFL LQTILRTDPQ GAVNFALMMS QMEGGCPLDY NTITDLFLQR NMIREATAFL LDVLKPNLEE HAFLQTKVLE
0601: INLVTYPNVA DAILANGMFS HYDRPRIAQL CEKAGLYLRA LQHYAELPDI KRVIVNTHAI EPQALVEFFG TLSKEWALEC MKDLLLVNLR GNLQIVVQAA
0701: KEYSEQLGVD GCIKLFEQFK SYEGLYFFLG SYLSSSEDPD IHFKYIESAA RTGQIKEVER VTRESNFYDA EKTKNFLMEA KLPDARPLIN VCDRFGFVPD
0801: LTHYLYTNNM LRYIEGYVQK VNPGNAPLVV GQLLDDECPE DFIKGLILSV RSLLPVEPLV DECEKRNRLR LLTQFLEHLV SEGSQDVHVH NALGKIIIDS
0901: NNNPEHFLTT NPFYDSRVVG KYCEKRDPTL AVVAYRRGQC DDELISVTNK NSLFKLQARY VVERMDGDLW DKVLLPENEY RRQFIDQVVS TALPESKSPE
1001: QVSAAVKAFM EADLPHELIE LLEKIVLQNS AFSGNFNLQN LLILTAIKAD PSRVMDYVNR LDNFDGPAVG EVAVEAQLYE EAFAIFKKFN LNVQAVDVLL
1101: DNIRSIERAE EFAFRVEEDA VWSQVAKAQL REGLVSEAIE SFIRADDATH FLDVIRAAEE ADVYHDLVKY LLMVRQKARE PKVDGELIFA YAKIDRLSDI
1201: EEFILMPNVA NLQNVGDRLY DEELYEAAKI IYAFISNWAK LAVTLVKLKQ FQGAVDAARK ANSAKTWKEV CFACVDAEEF RLAQICGLNI IIQVDDLEEV
1301: SEYYQNRGCF NELISLMESG LGLERAHMGI FTELGVLYAR YRPEKLMEHI KLFSTRLNIP KLIRACDEQQ HWKELTYLYI QYDEFDNAAT TIMNHSPDAW
1401: DHMQFKDVAV KVANVEIYYK AVHFYLQEHP DLINDLLNVL ALRLDHTRVV DIMRKAGQLH LVKPYMVAVQ SNNVSAVNEA LNELYVEEED YERLRESVDM
1501: HDNFDQIGLA QKLEKHELLE MRRIAAYIYK KAGRWKQSIA LSKKDNMYKD CMETCSQSGD RELSEDLLVY FIEQGKKECF ASCLFICYDL IRADVALELA
1601: WTNNMLDFAF PYLLQFIREY TSKVDDLVKD RIESQKEEKA KEQEEKDVVA QQNMYAQLLP LALPAPPGMG GPPPMGGMGM PPMGGMGMPP MGGMGMPPMG
1701: PGPMPAYGMP PMGNY
0101: AKTKVKSHQM PEQVVFWKWI TPKLLGLVTQ TSVYHWSIEG DSEPTKMFDR TANLANNQII NYRCDPAEKW LVLIGIAPGA PERPQLVKGN MQLFSVDQQR
0201: SQALEAHAAS FATFKVPGNE NPSTLICFAS KATNAGQITS KLHVIELGAQ PGKPGFSKKQ ADLFFPPDFQ DDFPVAMQIS QKYGLVYVIT KLGLLFVYDL
0301: ETAAAVYRNR ISPDPIFLTA ESSTTGGFYA INRRGQVLHA TVNDATVVPF VSGQLNNLEL AVNLAKRANL PGAENLVVQR FQELFSQTKY KEAAELAAES
0401: PQGLLRTPET VAKFQSVPVQ AGQTPPLLQY FGTLLTRGKL NAYESLELSR LVVNQNKKNL LENWLAEDKL ECSEELGDLV KTVDNDLALK IYIKARATPK
0501: VVAAFAERRE FDKILIYSKQ VGYTPDYLFL LQTILRTDPQ GAVNFALMMS QMEGGCPLDY NTITDLFLQR NMIREATAFL LDVLKPNLEE HAFLQTKVLE
0601: INLVTYPNVA DAILANGMFS HYDRPRIAQL CEKAGLYLRA LQHYAELPDI KRVIVNTHAI EPQALVEFFG TLSKEWALEC MKDLLLVNLR GNLQIVVQAA
0701: KEYSEQLGVD GCIKLFEQFK SYEGLYFFLG SYLSSSEDPD IHFKYIESAA RTGQIKEVER VTRESNFYDA EKTKNFLMEA KLPDARPLIN VCDRFGFVPD
0801: LTHYLYTNNM LRYIEGYVQK VNPGNAPLVV GQLLDDECPE DFIKGLILSV RSLLPVEPLV DECEKRNRLR LLTQFLEHLV SEGSQDVHVH NALGKIIIDS
0901: NNNPEHFLTT NPFYDSRVVG KYCEKRDPTL AVVAYRRGQC DDELISVTNK NSLFKLQARY VVERMDGDLW DKVLLPENEY RRQFIDQVVS TALPESKSPE
1001: QVSAAVKAFM EADLPHELIE LLEKIVLQNS AFSGNFNLQN LLILTAIKAD PSRVMDYVNR LDNFDGPAVG EVAVEAQLYE EAFAIFKKFN LNVQAVDVLL
1101: DNIRSIERAE EFAFRVEEDA VWSQVAKAQL REGLVSEAIE SFIRADDATH FLDVIRAAEE ADVYHDLVKY LLMVRQKARE PKVDGELIFA YAKIDRLSDI
1201: EEFILMPNVA NLQNVGDRLY DEELYEAAKI IYAFISNWAK LAVTLVKLKQ FQGAVDAARK ANSAKTWKEV CFACVDAEEF RLAQICGLNI IIQVDDLEEV
1301: SEYYQNRGCF NELISLMESG LGLERAHMGI FTELGVLYAR YRPEKLMEHI KLFSTRLNIP KLIRACDEQQ HWKELTYLYI QYDEFDNAAT TIMNHSPDAW
1401: DHMQFKDVAV KVANVEIYYK AVHFYLQEHP DLINDLLNVL ALRLDHTRVV DIMRKAGQLH LVKPYMVAVQ SNNVSAVNEA LNELYVEEED YERLRESVDM
1501: HDNFDQIGLA QKLEKHELLE MRRIAAYIYK KAGRWKQSIA LSKKDNMYKD CMETCSQSGD RELSEDLLVY FIEQGKKECF ASCLFICYDL IRADVALELA
1601: WTNNMLDFAF PYLLQFIREY TSKVDDLVKD RIESQKEEKA KEQEEKDVVA QQNMYAQLLP LALPAPPGMG GPPPMGGMGM PPMGGMGMPP MGGMGMPPMG
1701: PGPMPAYGMP PMGNY
001: MECRSLDLTI ISAEDLKDVQ LIGKQDLYAV VSINGDARTK QKTKVDKDCG TKPKWKHQMK LTVDDAAARD NRLTLVFEIV ADRPIAGDKP VGEVSVPVKE
101: LLDQNKGDEE KTVTYAVRLP NGKAKGSLKF SFKFGEKYTY GSSSGPHAPV PSAMDHKTMD QPVTAYPPGH GAPSAYPAPP AGPSSGYPPQ GHDDKHDGVY
201: GYPQQAGYPA GTGGYPPPGA YPQQGGYPGY PPQQQGGYPG YPPQGPYGYP QQGYPPQGPY GYPQQQAHGK PQKPKKHGKA GAGMGLGLGL GAGLLGGLLV
301: GEAVSDIADM GDMGDMGDMG GFDF
101: LLDQNKGDEE KTVTYAVRLP NGKAKGSLKF SFKFGEKYTY GSSSGPHAPV PSAMDHKTMD QPVTAYPPGH GAPSAYPAPP AGPSSGYPPQ GHDDKHDGVY
201: GYPQQAGYPA GTGGYPPPGA YPQQGGYPGY PPQQQGGYPG YPPQGPYGYP QQGYPPQGPY GYPQQQAHGK PQKPKKHGKA GAGMGLGLGL GAGLLGGLLV
301: GEAVSDIADM GDMGDMGDMG GFDF
Arabidopsis Description
SRC2Protein SRC2 homolog [Source:UniProtKB/Swiss-Prot;Acc:O04023]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.