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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • mitochondrion 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, plastid
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:mitochondrion
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS5A01G168700.2
TraesCS5B01G165500.2
TraesCS5D01G173000.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G05640.1 TraesCS5A01G168700.2 AT4G08520.1 21798944
AT3G05640.1 TraesCS5B01G165500.2 AT4G08520.1 21798944
AT3G05640.1 TraesCS5D01G173000.1 AT4G08520.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1B01G242300.1 Wheat mitochondrion 93.51 93.51
TraesCS1D01G229600.2 Wheat mitochondrion 93.51 86.38
TraesCS1A01G228000.1 Wheat mitochondrion, peroxisome, plastid 93.81 85.25
TraesCS1B01G242400.1 Wheat cytosol, peroxisome, plastid 84.07 83.82
HORVU1Hr1G059130.3 Barley mitochondrion 92.33 83.02
EES19385 Sorghum mitochondrion, nucleus, peroxisome, plastid 80.24 77.05
TraesCS1B01G033400.1 Wheat cytosol, peroxisome 50.44 75.33
Zm00001d037949_P001 Maize mitochondrion 77.88 74.79
Os05t0358500-01 Rice mitochondrion 76.99 73.94
GSMUA_Achr11P... Banana mitochondrion 67.85 67.25
GSMUA_Achr8P10330_001 Banana mitochondrion, nucleus 65.78 63.71
TraesCS7B01G361000.1 Wheat mitochondrion, peroxisome, plastid 64.9 62.86
HORVU1Hr1G059140.2 Barley mitochondrion, plastid 46.61 59.4
CDY18810 Canola cytosol, nucleus, peroxisome 60.18 58.62
Bra040530.1-P Field mustard cytosol, nucleus, peroxisome 60.18 58.62
KRG96758 Soybean cytosol, mitochondrion, peroxisome 63.42 58.27
AT3G05640.1 Thale cress cytosol, mitochondrion, peroxisome 61.36 58.1
Solyc01g100040.2.1 Tomato cytosol, mitochondrion, peroxisome 62.54 57.77
PGSC0003DMT400063747 Potato cytosol, mitochondrion, peroxisome 62.24 57.49
KRH68473 Soybean cytosol, mitochondrion, peroxisome 62.83 57.41
VIT_14s0060g02070.t01 Wine grape mitochondrion 61.95 57.38
KRG92929 Soybean nucleus 60.47 55.86
KRH33864 Soybean nucleus 60.47 55.71
Bra036606.1-P Field mustard nucleus 61.06 55.5
CDY05554 Canola nucleus 60.18 55.43
CDY19742 Canola nucleus 60.47 54.96
CDY53338 Canola cytosol, mitochondrion, nucleus 60.18 54.69
AT5G27930.1 Thale cress nucleus 59.88 54.42
Bra020569.1-P Field mustard nucleus 60.18 54.4
CDY25013 Canola nucleus 59.88 54.13
PGSC0003DMT400015950 Potato plastid 53.98 51.12
KRH50799 Soybean cytosol 54.87 50.68
Solyc01g065700.2.1 Tomato nucleus 53.69 50.42
KRH02293 Soybean cytosol 55.46 50.0
AT3G16800.2 Thale cress nucleus 51.62 49.86
Bra021202.1-P Field mustard nucleus 51.33 49.57
CDY50503 Canola nucleus 51.33 49.57
CDY67911 Canola nucleus 51.33 49.57
VIT_05s0077g01820.t01 Wine grape cytosol, mitochondrion, peroxisome, plastid 58.41 49.25
Bra022179.1-P Field mustard nucleus 50.15 48.43
CDX92097 Canola nucleus 49.85 48.15
CDX95903 Canola nucleus 49.85 48.15
TraesCS6B01G216900.1 Wheat nucleus, peroxisome, plastid 42.77 40.62
TraesCS2B01G229000.1 Wheat cytosol, peroxisome, plastid 43.07 33.87
TraesCS5B01G149300.1 Wheat cytosol 42.48 33.72
TraesCS4B01G162100.1 Wheat cytosol, mitochondrion, peroxisome 42.77 33.1
TraesCS6B01G229600.1 Wheat mitochondrion 42.18 27.61
TraesCS7B01G137400.2 Wheat plastid 46.61 27.48
TraesCS2B01G291800.1 Wheat mitochondrion 41.89 26.84
TraesCS2B01G166100.3 Wheat cytosol 27.14 19.7
TraesCS6B01G231400.1 Wheat plastid 27.14 8.47
Protein Annotations
KEGG:04658+3.1.3.16KEGG:04660+3.1.3.16MapMan:18.4.24.2.5Gene3D:3.60.40.10GO:GO:0003674GO:GO:0003824
GO:GO:0004722GO:GO:0006464GO:GO:0006470GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016787GO:GO:0019538InterPro:IPR001932InterPro:IPR036457PFAM:PF00481InterPro:PP2C
InterPro:PPM-type_dom_sfInterPro:PPM-type_phosphatase_domPFscan:PS51746PANTHER:PTHR13832PANTHER:PTHR13832:SF198SMART:SM00332
SUPFAM:SSF81606EnsemblPlantsGene:TraesCS1B01G242200EnsemblPlants:TraesCS1B01G242200.1TIGR:cd00143::
Description
No Description!
Coordinates
chr1B:-:429765385..429768064
Molecular Weight (calculated)
37158.9 Da
IEP (calculated)
7.117
GRAVY (calculated)
-0.327
Length
339 amino acids
Sequence
(BLAST)
001: MRQLSSLLQG LARSMALGKE RKEEEQGTVL RSSGTLRGEG SETLAAVWSR RGEKGTNQDC SIVWEGFGRQ EDTIFSGIFD GHGQWGHYVS KAVRDSLPPS
101: LLCRWQEAVT LASLIDGEKK LCDSQFDLWK QSYLAAAAAV DEELRRSSRL DAVNSGSTAL SVVKKGDTMV IANVGDSRAV LGTTSDDGSI AAVQLTVDFK
201: PNLPQEKARI VQCKGRVHCH EDEPGVHRVW LPDREAPGLA MSRAFGDYCV KDYGVISAPE VTQRRIAARD QFVILATDGV WDVVSNEDAV QIVAATADRE
301: KAAKRLVQCA VRAWRRKRQG YAVDDCSAIC LFLHHSPPS
Best Arabidopsis Sequence Match ( AT3G05640.3 )
(BLAST)
001: MGHFSSMFNG IARSFSIKKA KNINSSKSYA KEATDEMARE AKKKELILRS SGCINADGSN NLASVFSRRG EKGVNQDCAI VWEGYGCQED MIFCGIFDGH
101: GPWGHFVSKQ VRNSMPISLL CNWKETLSQT TIAEPDKELQ RFAIWKYSFL KTCEAVDLEL EHHRKIDSFN SGTTALTIVR QGDVIYIANV GDSRAVLATV
201: SDEGSLVAVQ LTVDFKPNLP QEEERIIGCN GRVFCLQDEP GVHRVWQPVD ESPGLAMSRA FGDYCIKDYG LVSVPEVTQR HISIRDQFII LATDGVWDVI
301: SNQEAIDIVS STAERAKAAK RLVQQAVRAW NRKRRGIAMD DISAVCLFFH SSSSSPSL
Arabidopsis Description
Probable protein phosphatase 2C 34 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9W9]
SUBAcon: [mitochondrion,peroxisome,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.