Factsheet for Bra021202.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY67911	Canola	nucleus	99.72	99.72
CDY50503	Canola	nucleus	99.43	99.43
AT3G16800.2	Thale cress	nucleus	90.88	90.88
Bra022179.1-P	Field mustard	nucleus	90.6	90.6
GSMUA_Achr11P...	Banana	mitochondrion	59.26	60.82
GSMUA_Achr8P10330_001	Banana	mitochondrion, nucleus	56.98	57.14
KRH50799	Soybean	cytosol	59.54	56.95
Bra040530.1-P	Field mustard	cytosol, nucleus, peroxisome	55.27	55.75
KRH02293	Soybean	cytosol	59.54	55.59
Solyc01g065700.2.1	Tomato	nucleus	56.7	55.12
TraesCS1B01G242400.1	Wheat	cytosol, peroxisome, plastid	52.99	54.71
PGSC0003DMT400015950	Potato	plastid	55.56	54.47
Bra020569.1-P	Field mustard	nucleus	57.55	53.87
Bra036606.1-P	Field mustard	nucleus	56.98	53.62
EES19385	Sorghum	mitochondrion, nucleus, peroxisome, plastid	53.28	52.97
TraesCS1A01G228100.1	Wheat	mitochondrion	50.71	52.66
VIT_05s0077g01820.t01	Wine grape	cytosol, mitochondrion, peroxisome, plastid	59.83	52.24
HORVU1Hr1G059090.7	Barley	cytosol, peroxisome, plastid	51.85	51.7
TraesCS1B01G242300.1	Wheat	mitochondrion	49.86	51.62
TraesCS1B01G242200.1	Wheat	mitochondrion	49.57	51.33
Zm00001d037949_P001	Maize	mitochondrion	51.28	50.99
TraesCS1B01G033400.1	Wheat	cytosol, peroxisome	32.76	50.66
Os05t0358500-01	Rice	mitochondrion	50.14	49.86
TraesCS1D01G230000.2	Wheat	cytosol, peroxisome, plastid	52.14	49.73
TraesCS1D01G229700.1	Wheat	mitochondrion	50.71	48.37
TraesCS1D01G229600.2	Wheat	mitochondrion	49.57	47.41
TraesCS1A01G228000.1	Wheat	mitochondrion, peroxisome, plastid	50.14	47.19
HORVU1Hr1G059130.3	Barley	mitochondrion	50.43	46.95
TraesCS1A01G228200.1	Wheat	mitochondrion	45.58	41.56
HORVU1Hr1G059140.2	Barley	mitochondrion, plastid	29.63	39.1
Bra009643.1-P	Field mustard	cytosol, peroxisome, plastid	38.46	37.4
TraesCS7B01G361000.1	Wheat	mitochondrion, peroxisome, plastid	36.75	36.86
Bra034542.1-P	Field mustard	cytosol	33.9	36.5
Bra009875.1-P	Field mustard	cytosol	35.04	36.39
Bra037033.1-P	Field mustard	cytosol	32.76	35.28
Bra035360.1-P	Field mustard	plastid	41.6	33.33
Bra021414.1-P	Field mustard	plastid	42.73	32.12
Bra040598.1-P	Field mustard	plastid	41.6	31.88
Bra033411.1-P	Field mustard	mitochondrion	37.04	30.73
Bra035131.1-P	Field mustard	nucleus	40.46	29.16
Bra001060.1-P	Field mustard	plastid	39.6	29.14
Bra026075.1-P	Field mustard	cytosol, peroxisome, plastid	39.03	28.42
Bra030536.1-P	Field mustard	cytosol, peroxisome, plastid	36.18	28.41
Bra034206.1-P	Field mustard	plastid	37.32	28.17
Bra021332.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	11.11	26.71
Bra001189.1-P	Field mustard	plastid	23.36	23.16
Bra040230.1-P	Field mustard	cytosol	19.66	21.17
Bra040228.1-P	Field mustard	cytosol, peroxisome, plastid	7.41	18.84
Bra040822.1-P	Field mustard	cytosol	26.5	9.63

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.5	Gene3D:3.60.40.10	EnsemblPlantsGene:Bra021202	EnsemblPlants:Bra021202.1
EnsemblPlants:Bra021202.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722	GO:GO:0006464	GO:GO:0006470
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932
InterPro:IPR036457	UniProt:M4DXF6	PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF310	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI00025439DE

Description

AT3G16800 (E=2e-187) | protein phosphatase 2C, putative / PP2C, putative

Coordinates

chrA01:-:23383570..23385304

Molecular Weight (calculated)

38941.0 Da

IEP (calculated)

7.297

GRAVY (calculated)

-0.166

Length

351 amino acids

Sequence
(BLAST)

001: MVLLPAFLDG LARSVSMKKG KYIPEDEDGG GEIAKLLMKD AKKNSTLLGS SGFVKSETSK RFTSICSNRG EKGINQDRAI VWEEFGCQED ITFCGMFDGH
101: GPWGHVITKR VKKLFPSSLL CQWQQTIASL SLSPECFSPF DIWKQSCLKT FSLIDLDLKI HPSIDSYCSG CTALTAVLQG DHLVVANAGD SRAVIATTSD
201: DGSGLVPVQL SVDFKPNIPE EAERIKQSDG RLFCLDDEPG VYRVGMPNGR SLGLAVSRAF GDYCLKDFGL VSVPEVTYRK ITDKDQFLIL ATDGMWDVMT
301: NDEAVEIVRG VKERRKSAKR LVERAMMLWR RKRRSIAMDD ISALCLFFHP S

Best Arabidopsis Sequence Match ( AT3G16800.3 )
(BLAST)

001: MVLLPAFLDG LARTVSTKKG KKLSEDEDGG REIAKSMIKD SKKNSTLLGT SGFVSSESSK RFTSICSNRG EKGINQDRAI VWEGFGCQED ITFCGMFDGH
101: GPWGHVIAKR VKKSFPSSLL CQWQQTLASL SSSPECSSPF DLWKQACLKT FSIIDLDLKI SPSIDSYCSG CTALTAVLQG DHLVIANAGD SRAVIATTSD
201: DGNGLVPVQL SVDFKPNIPE EAERIKQSDG RLFCLDDEPG VYRVGMPNGG SLGLAVSRAF GDYCLKDFGL VSEPEVTYRK ITDKDQFLIL ATDGMWDVMT
301: NNEAVEIVRG VKERRKSAKR LVERAVTLWR RKRRSIAMDD ISVLCLFFRP S

Arabidopsis Description

Probable protein phosphatase 2C 41 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRZ4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.