Factsheet for Bra035360.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 3
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY63003	Canola	mitochondrion, plastid	99.09	99.09
CDY37649	Canola	mitochondrion, plastid	95.21	96.98
AT5G36250.2	Thale cress	plastid	87.21	82.68
Bra021332.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	21.23	63.7
KRH45221	Soybean	cytosol, mitochondrion, peroxisome	22.6	57.89
Bra040598.1-P	Field mustard	plastid	58.9	56.33
Bra021414.1-P	Field mustard	plastid	58.45	54.82
KRG93121	Soybean	plastid	43.38	52.05
Bra001060.1-P	Field mustard	plastid	54.79	50.31
KRH36356	Soybean	cytosol	23.52	49.52
KRH01535	Soybean	cytosol	49.77	47.91
Bra009643.1-P	Field mustard	cytosol, peroxisome, plastid	38.36	46.54
Bra033411.1-P	Field mustard	mitochondrion	42.24	43.74
Bra026075.1-P	Field mustard	cytosol, peroxisome, plastid	47.03	42.74
Bra035131.1-P	Field mustard	nucleus	46.8	42.09
Bra030536.1-P	Field mustard	cytosol, peroxisome, plastid	42.92	42.06
Bra034206.1-P	Field mustard	plastid	44.29	41.72
Bra040530.1-P	Field mustard	cytosol, nucleus, peroxisome	33.1	41.67
Bra021202.1-P	Field mustard	nucleus	33.33	41.6
Bra034542.1-P	Field mustard	cytosol	30.82	41.41
Bra009875.1-P	Field mustard	cytosol	31.51	40.83
Bra036606.1-P	Field mustard	nucleus	34.7	40.75
Bra037033.1-P	Field mustard	cytosol	30.14	40.49
Bra020569.1-P	Field mustard	nucleus	34.47	40.27
Bra022179.1-P	Field mustard	nucleus	31.96	39.89
KRH45222	Soybean	nucleus	18.95	35.78
Bra001189.1-P	Field mustard	plastid	19.18	23.73
Bra040230.1-P	Field mustard	cytosol	17.35	23.31
Bra040228.1-P	Field mustard	cytosol, peroxisome, plastid	7.08	22.46
Bra040822.1-P	Field mustard	cytosol	23.52	10.66

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.5	Gene3D:3.60.40.10	EnsemblPlantsGene:Bra035360	EnsemblPlants:Bra035360.1
EnsemblPlants:Bra035360.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722	GO:GO:0006464	GO:GO:0006470
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932
InterPro:IPR036457	UniProt:M4F2R1	PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF510	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI000253E615
SEG:seg	:	:	:	:	:

Description

AT5G36250 (E=3e-194) | protein phosphatase 2C, putative / PP2C, putative

Coordinates

chrScaffold000104:-:162078..164068

Molecular Weight (calculated)

48151.3 Da

IEP (calculated)

8.219

GRAVY (calculated)

-0.375

Length

438 amino acids

Sequence
(BLAST)

001: MGSCLSSSSS GRRRSIPPGG SNRRRRKSSS KRRSCSSSFD NTGGEDEPLL HRIPGRMFLN GSTDHASLFS QQGKKGPNQD AMIVWENFGS MADTVFCGVF
101: DGHGPYGHVI AKRVRDLLPL KLGSHLESSY VSCEEVLKEI SLNTADRKTS ESLVHISANG ESRVYNKDQD MVQTLLTSIV KAYRFMDKEL KMQVDVDCFC
201: SGTTAVTMVK QGQHLVVGNI GDSRAVLGTR NKENKLVPFQ LTEDLKPDVP AEAARIKRCR GRIFALRDEP GVARLWLPNH NSPGLAMARA FGDFCLKDFG
301: LISVPDVSYR RLTEKDEFVV LATDGIWDVL TNEEVVEIVA KAPTRCTAGR ALVEAAVRNW RWKFPTSKVD DCAVVCLFLD SKPDKLSTAS FSVDKHISNG
401: LSEPDTASTS TPGSGTESPE LNGVDRIVNL HMHVPTKE

Best Arabidopsis Sequence Match ( AT5G36250.1 )
(BLAST)

001: MGSCLSSSGG GGSRRSLHGS PHVPGPGRRK RPPKRRPGSC SSSFDNTEEP LLHRIPGRMF LNGSTDTVSL FSQQGKKGPN QDAMIVWENF GSMEDTVFCG
101: VFDGHGPYGH IVAKRVRDLL PLKLGSHLES YVSPEEVLKE ISLNTDDRKI SEDLVHISAN GESRVYNKDY VKDQDMIQML IGSIVKAYRF MDKELKMQVD
201: VDCFCSGTTA VTMVKQGQHL VIGNIGDSRA VLGVRNKDNK LVPFQLTEDL KPDVPAEAER IKRCRGRIFA LRDEPGVARL WLPNHNSPGL AMARAFGDFC
301: LKDFGLISVP DVSYRRLTEK DEFVVLATDG IWDALTNEEV VKIVAKAPTR SSAGRALVEA AVRNWRWKFP TSKVDDCAVV CLFLDSEPNR LSTASFSKEK
401: HINNGVTEPE PDTASSSTPD SGTGSPELNG VNRIDTLVNL PVYVPTKE

Arabidopsis Description

Protein phosphatase 2C family protein [Source:TAIR;Acc:AT5G36250]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.