Factsheet for Bra021414.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 4
plastid 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY53743	Canola	plastid	98.93	98.72
CDY53741	Canola	plastid	98.07	98.07
Bra040598.1-P	Field mustard	plastid	87.37	89.08
Bra001060.1-P	Field mustard	plastid	84.58	82.81
AT3G02750.3	Thale cress	plastid	88.22	78.18
VIT_04s0023g00690.t01	Wine grape	plastid	70.02	67.28
Solyc04g056560.2.1	Tomato	cytosol	56.32	65.59
PGSC0003DMT400027278	Potato	cytosol	57.17	65.44
PGSC0003DMT400060345	Potato	plastid	63.38	62.98
Solyc05g055790.2.1	Tomato	plastid	62.53	62.13
KRH45219	Soybean	vacuole	12.21	60.0
Bra035360.1-P	Field mustard	plastid	54.82	58.45
Bra021332.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	15.85	50.68
Bra033411.1-P	Field mustard	mitochondrion	45.61	50.35
Bra009643.1-P	Field mustard	cytosol, peroxisome, plastid	38.33	49.58
Bra034206.1-P	Field mustard	plastid	47.75	47.96
Bra030536.1-P	Field mustard	cytosol, peroxisome, plastid	45.61	47.65
Bra035131.1-P	Field mustard	nucleus	49.46	47.43
Bra026075.1-P	Field mustard	cytosol, peroxisome, plastid	48.82	47.3
Bra040530.1-P	Field mustard	cytosol, nucleus, peroxisome	33.83	45.4
Bra036606.1-P	Field mustard	nucleus	35.33	44.24
Bra022179.1-P	Field mustard	nucleus	32.55	43.3
Bra021202.1-P	Field mustard	nucleus	32.12	42.73
Bra020569.1-P	Field mustard	nucleus	34.05	42.4
Bra034542.1-P	Field mustard	cytosol	29.12	41.72
Bra009875.1-P	Field mustard	cytosol	29.98	41.42
Bra037033.1-P	Field mustard	cytosol	28.05	40.18
Bra001189.1-P	Field mustard	plastid	19.49	25.71
Bra040230.1-P	Field mustard	cytosol	17.34	24.85
Bra040228.1-P	Field mustard	cytosol, peroxisome, plastid	7.07	23.91
Bra040822.1-P	Field mustard	cytosol	26.34	12.73

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.5	Gene3D:3.60.40.10	EnsemblPlantsGene:Bra021414	EnsemblPlants:Bra021414.1
EnsemblPlants:Bra021414.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722	GO:GO:0006464	GO:GO:0006470
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932
InterPro:IPR036457	UniProt:M4DY18	PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF539	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI0002544AF3
SEG:seg	:	:	:	:	:

Description

AT3G02750 (E=4e-137) | protein phosphatase 2C family protein / PP2C family protein

Coordinates

chrA01:-:25283342..25285040

Molecular Weight (calculated)

50870.0 Da

IEP (calculated)

6.050

GRAVY (calculated)

-0.397

Length

467 amino acids

Sequence
(BLAST)

001: MGSCLSAESM SPRPGSPCSP GFGVRKRKNS KNKRLGGSRN SSFDSRRDDP LHRVPGRMFL NGSSEVACIF TQQGKKGPNQ DAMVVWESFG SRTDTVFCGV
101: FDGHGPFGHM VAKRVRDNLP LKLSAYWEAK VPVEGSIKTV NNSANNNSED AASFVSTEEE PRPEESTESE LFQTLKEAFL KAFKVMDREL KFHGSVDCFC
201: SGTTAVTLIK QGEYLVVGNV GDSRAVMGTR DGKNGLVAVQ LTVDLKPNLP AEEERIKKCR GRVFALRDEP DVCRVWLPNC DSPGLAMARA FGDFCLKDFG
301: LISVPEVSFR RLTEKDEFIV LATDGIWDVL SNEEVVKIVA SAPSRSSAAR ALVETAVRAW RHKYPTSKVD DCAAVCLYLN SNGSNAISTA SSFSKLEDGD
401: EIDDGSGPSG LGRSSTVRTG KEIALDESEA EKLIKEEDTE HGTEYSALEG VARVNTLLNL PRFVPGK

Best Arabidopsis Sequence Match ( AT3G02750.1 )
(BLAST)

001: MGSCLSAESR SPRPGSPCSP AFSVRKRKNS KKRPGSRNSS FDYRREEPLN QVPGRMFLNG STEVACIYTQ QGKKGPNQDA MVVWENFGSR TDTIFCGVFD
101: GHGPYGHMVA KRVRDNLPLK LSAYWEAKVP VEGVLKAITT DTVNNVTNIN NPEDAAAAAA FVTAEEEPRT SADMEEENTE TQPELFQTLK ESFLKAFKVM
201: DRELKFHGSV DCFCSGTTAV TLIKQGQYLV VGNVGDSRAV MGTRDSENTL VAVQLTVDLK PNLPAEAERI RKCRGRVFAL RDEPEVCRVW LPNCDSPGLA
301: MARAFGDFCL KDFGLISVPD VSFRQLTEKD EFIVLATDGI WDVLSNEDVV AIVASAPSRS SAARALVESA VRAWRYKYPT SKVDDCAAVC LYLDSSNTNA
401: ISTASSISKL EDGEEEELKA TTEDDDASGP SGLGRSSTVR SGKEIALDES ETEKLIKEAD NLDSEPGTEY SALEGVARVN TLLNLPRFVP GK

Arabidopsis Description

Protein phosphatase 2C family protein [Source:TAIR;Acc:AT3G02750]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.