Factsheet for Solyc04g056560.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400027278	Potato	cytosol	97.26	95.59
Solyc05g055790.2.1	Tomato	plastid	73.57	62.77
VIT_04s0023g00690.t01	Wine grape	plastid	75.31	62.14
KRH40292	Soybean	plastid	70.57	57.87
KRH00931	Soybean	plastid	70.07	57.7
Bra021414.1-P	Field mustard	plastid	65.59	56.32
CDY53743	Canola	plastid	65.09	55.77
CDY53741	Canola	plastid	64.59	55.46
Bra040598.1-P	Field mustard	plastid	63.34	55.46
Bra001060.1-P	Field mustard	plastid	64.34	54.09
CDX92009	Canola	plastid	63.09	53.49
CDX74239	Canola	plastid	64.09	52.88
AT3G02750.3	Thale cress	plastid	68.58	52.18
CDY28706	Canola	cytosol, peroxisome, plastid	62.84	47.55
CDY51537	Canola	cytosol, peroxisome, plastid	62.09	46.72
Solyc08g065670.2.1	Tomato	peroxisome	34.41	45.1
Solyc10g008490.2.1	Tomato	plastid	50.12	42.86
Solyc07g054300.2.1	Tomato	plastid	49.63	42.16
Solyc07g066260.2.1	Tomato	cytosol, nucleus, peroxisome	54.11	42.14
Solyc01g100040.2.1	Tomato	cytosol, mitochondrion, peroxisome	37.91	41.42
Solyc10g076320.1.1	Tomato	nucleus	44.14	40.6
Solyc08g065500.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	33.67	40.18
Solyc01g065700.2.1	Tomato	nucleus	35.41	39.34
Solyc08g065540.2.1	Tomato	cytosol, nucleus, peroxisome	32.42	39.16
Solyc08g065680.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	19.7	38.54
Solyc10g005640.2.1	Tomato	nucleus	53.12	38.31
Solyc10g085370.1.1	Tomato	cytosol, nucleus, peroxisome	41.15	36.42
Solyc01g080400.2.1	Tomato	cytosol	20.95	20.29
Solyc05g018300.2.1	Tomato	cytosol	23.69	8.8

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.5	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932	InterPro:IPR036457	UniProt:K4BSV4	PFAM:PF00481
InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF510
SMART:SM00332	SUPFAM:SSF81606	EnsemblPlantsGene:Solyc04g056560.2	EnsemblPlants:Solyc04g056560.2.1	UniParc:UPI0002765E63	SEG:seg

Description

No Description!

Coordinates

chr4:+:54530088..54536828

Molecular Weight (calculated)

43787.3 Da

IEP (calculated)

4.613

GRAVY (calculated)

-0.266

Length

401 amino acids

Sequence
(BLAST)

001: MVVWENFASR TDTVFCGVFD GHGPHGHMVA KRVRDSLPSK LSAHWEVSLK SEDVLKEISL NAGASLYPED ASLISAADDS RVSIDVEETG KHPEIFQTLK
101: ESFLKAYKVM DRELKSYTNI DCFCSGTTAV TLIKQGQDLV IGNVGDSRAI LGTRDKDGSL TAVQLTVDLK PNLPAEAERI RKCRGRVFSL HDEPEVARVW
201: LPNSDSPGLA MARAFGDFCL KDFGLISVPE ISYRRLTGKD EFIVLATDGI WDVLTNDEVV KIVASASSRS SAARSLVESA VRAWRTKYPT SKVDDCAVVC
301: LFLDSNSNNL STASNTEDSD KTVSMKANEV GAKTGDASGP TAFTRSGTVR EVEVSEEEIE EASEHEELLS EVGAEWSALE GVSRLNTLLT LPRFVPDKDE
401: N

Best Arabidopsis Sequence Match ( AT3G02750.1 )
(BLAST)

001: MGSCLSAESR SPRPGSPCSP AFSVRKRKNS KKRPGSRNSS FDYRREEPLN QVPGRMFLNG STEVACIYTQ QGKKGPNQDA MVVWENFGSR TDTIFCGVFD
101: GHGPYGHMVA KRVRDNLPLK LSAYWEAKVP VEGVLKAITT DTVNNVTNIN NPEDAAAAAA FVTAEEEPRT SADMEEENTE TQPELFQTLK ESFLKAFKVM
201: DRELKFHGSV DCFCSGTTAV TLIKQGQYLV VGNVGDSRAV MGTRDSENTL VAVQLTVDLK PNLPAEAERI RKCRGRVFAL RDEPEVCRVW LPNCDSPGLA
301: MARAFGDFCL KDFGLISVPD VSFRQLTEKD EFIVLATDGI WDVLSNEDVV AIVASAPSRS SAARALVESA VRAWRYKYPT SKVDDCAAVC LYLDSSNTNA
401: ISTASSISKL EDGEEEELKA TTEDDDASGP SGLGRSSTVR SGKEIALDES ETEKLIKEAD NLDSEPGTEY SALEGVARVN TLLNLPRFVP GK

Arabidopsis Description

Protein phosphatase 2C family protein [Source:TAIR;Acc:AT3G02750]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.