CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74239	Canola	plastid	93.87	91.36
CDY53743	Canola	plastid	83.93	84.83
CDY53741	Canola	plastid	83.51	84.58
AT3G02750.3	Thale cress	plastid	84.36	75.71
CDY28706	Canola	cytosol, peroxisome, plastid	79.49	70.94
CDY51537	Canola	cytosol, peroxisome, plastid	79.7	70.73
CDY72270	Canola	cytosol	30.44	68.25
VIT_04s0023g00690.t01	Wine grape	plastid	65.75	63.99
Solyc04g056560.2.1	Tomato	cytosol	53.49	63.09
PGSC0003DMT400027278	Potato	cytosol	53.7	62.25
PGSC0003DMT400060345	Potato	plastid	59.2	59.57
CDY46975	Canola	cytosol, mitochondrion, peroxisome	39.11	59.49
CDX91383	Canola	cytosol	39.53	58.44
Solyc05g055790.2.1	Tomato	plastid	57.93	58.3
CDY37649	Canola	mitochondrion, plastid	52.64	57.91
CDY70364	Canola	cytosol, peroxisome	44.19	57.73
KRH45219	Soybean	vacuole	11.42	56.84
CDY63003	Canola	mitochondrion, plastid	52.43	56.62
CDY00978	Canola	cytosol	41.01	55.27
CDY56581	Canola	cytosol	37.21	51.76
CDY69821	Canola	plastid	42.28	50.89
CDX89881	Canola	plastid	45.24	50.35
CDY15466	Canola	cytosol, peroxisome, plastid	45.03	50.24
CDX97493	Canola	cytosol	34.88	49.7
CDY51389	Canola	cytosol, peroxisome, plastid	44.19	49.41
CDY48559	Canola	plastid	45.45	48.86
CDY21964	Canola	plastid	45.24	48.75
CDX88554	Canola	nucleus	48.84	48.33
CDY40298	Canola	cytosol, peroxisome, plastid	36.79	48.2
CDX87369	Canola	nucleus	48.41	46.54
CDY33350	Canola	cytosol, nucleus, plastid	46.93	46.25
CDY35072	Canola	cytosol, peroxisome, plastid	46.3	45.44
CDY18810	Canola	cytosol, nucleus, peroxisome	33.19	45.11
CDY53338	Canola	cytosol, mitochondrion, nucleus	35.31	44.77
CDY19742	Canola	nucleus	35.1	44.5
CDY05554	Canola	nucleus	34.46	44.29
CDY34568	Canola	cytosol	13.11	44.29
CDY25013	Canola	nucleus	34.04	42.93
CDX80553	Canola	cytosol	29.81	41.72
CDY62635	Canola	cytosol, mitochondrion, peroxisome, plastid	33.83	41.56
CDX88210	Canola	cytosol	29.6	41.42
CDY28276	Canola	cytosol	28.54	41.41
CDY45023	Canola	cytosol	28.33	41.1
CDY50503	Canola	nucleus	30.23	40.74
CDY67911	Canola	nucleus	30.23	40.74
CDX95903	Canola	nucleus	30.23	40.74
CDX92097	Canola	nucleus	30.02	40.46
CDX72381	Canola	cytosol	27.7	40.18
CDY13509	Canola	cytosol	27.06	39.26
CDY08060	Canola	plastid	19.45	25.99
CDX74112	Canola	plastid	19.45	25.99
CDY18847	Canola	cytosol	16.91	24.54
CDX82702	Canola	nucleus	16.7	17.56
CDY35922	Canola	cytosol	25.37	11.1
CDY05716	Canola	cytosol	25.16	11.05

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.5	Gene3D:3.60.40.10	GO:A0A078DU73	EnsemblPlants:CDX92009
ProteinID:CDX92009	ProteinID:CDX92009.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722	GO:GO:0006464
GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00153664001	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf
InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF539	SMART:SM00332	SUPFAM:SSF81606
UniParc:UPI0004EF21FF	SEG:seg	:	:	:	:

Description

BnaC03g33110D

Coordinates

chrLK031870:-:1231363..1234265

Molecular Weight (calculated)

51605.6 Da

IEP (calculated)

4.796

GRAVY (calculated)

-0.398

Length

473 amino acids

Sequence
(BLAST)

001: MGSCLSAESM SPTPGSPCSP GFGVKKRKNS KKRLGSRNSS FNHRRDDDDP LSTVPGRMFL NGSSEVACIF TQQGKKGPNQ DAMVVWENFG SRTDTIFCGV
101: FDGHGPYGHM VAKSVRDSLP LKLNAYWEPK VPIEGALKTT TTANSADNIN NSEDAEEENM EETHSELFQT LKEAFLKAFK VVDRELIFNG SVDCFCSGTT
201: AVTLIKQGEY LVVGNVGDSR AVMGTRDGEN GLVAVQLTVD LKPNLPAEEE RIKKCRGRVF ALKDEPEVYR VWLPNCDSPG LAMARAFGDF CLKNFGLISV
301: PDVSFRRLTQ KDEFIVLASD GIWDVLSNEE VVGIVASAAP SRSSAARAVV ESAVRAWRYK YPTSKVDDCA TVCLYLDSNN TNAISTASSI SKLADEELKT
401: ASENDDESGL SGLGRSSSVR TSKEIALDEN EAERLIKEEE DNMDTEHGTE YSALEGVARV NTLLNLPRFV PGK

Best Arabidopsis Sequence Match ( AT3G02750.1 )
(BLAST)

001: MGSCLSAESR SPRPGSPCSP AFSVRKRKNS KKRPGSRNSS FDYRREEPLN QVPGRMFLNG STEVACIYTQ QGKKGPNQDA MVVWENFGSR TDTIFCGVFD
101: GHGPYGHMVA KRVRDNLPLK LSAYWEAKVP VEGVLKAITT DTVNNVTNIN NPEDAAAAAA FVTAEEEPRT SADMEEENTE TQPELFQTLK ESFLKAFKVM
201: DRELKFHGSV DCFCSGTTAV TLIKQGQYLV VGNVGDSRAV MGTRDSENTL VAVQLTVDLK PNLPAEAERI RKCRGRVFAL RDEPEVCRVW LPNCDSPGLA
301: MARAFGDFCL KDFGLISVPD VSFRQLTEKD EFIVLATDGI WDVLSNEDVV AIVASAPSRS SAARALVESA VRAWRYKYPT SKVDDCAAVC LYLDSSNTNA
401: ISTASSISKL EDGEEEELKA TTEDDDASGP SGLGRSSTVR SGKEIALDES ETEKLIKEAD NLDSEPGTEY SALEGVARVN TLLNLPRFVP GK

Arabidopsis Description

Protein phosphatase 2C family protein [Source:TAIR;Acc:AT3G02750]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.