Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY15466 | Canola | cytosol, peroxisome, plastid | 93.14 | 92.92 |
| Bra030536.1-P | Field mustard | cytosol, peroxisome, plastid | 97.16 | 91.95 |
| CDY69821 | Canola | plastid | 80.14 | 86.26 |
| CDX89881 | Canola | plastid | 83.92 | 83.53 |
| AT1G03590.1 | Thale cress | cytosol, nucleus, peroxisome, plastid | 83.92 | 76.84 |
| CDY21964 | Canola | plastid | 75.18 | 72.44 |
| CDY48559 | Canola | plastid | 75.18 | 72.27 |
| VIT_12s0059g01820.t01 | Wine grape | plastid | 72.1 | 64.48 |
| KRH22416 | Soybean | nucleus, plastid | 72.34 | 64.42 |
| KRH25524 | Soybean | nucleus | 71.63 | 64.33 |
| KRH56012 | Soybean | nucleus | 71.39 | 64.12 |
| KRH26917 | Soybean | cytosol, plastid | 71.39 | 63.71 |
| PGSC0003DMT400047180 | Potato | plastid | 70.45 | 63.14 |
| Solyc07g054300.2.1 | Tomato | plastid | 69.03 | 61.86 |
| Solyc10g008490.2.1 | Tomato | plastid | 68.32 | 61.62 |
| PGSC0003DMT400055813 | Potato | plastid | 67.85 | 61.06 |
| CDY72270 | Canola | cytosol | 28.13 | 56.4 |
| Os07t0566200-01 | Rice | plasma membrane | 54.61 | 54.1 |
| EER99559 | Sorghum | plastid | 54.85 | 53.83 |
| TraesCS2A01G201900.1 | Wheat | cytosol, peroxisome, plastid | 54.37 | 53.74 |
| Zm00001d006614_P001 | Maize | plastid | 54.61 | 53.47 |
| TraesCS2D01G214200.1 | Wheat | cytosol, peroxisome, plastid | 54.37 | 53.36 |
| HORVU2Hr1G039710.1 | Barley | cytosol, peroxisome, plastid | 54.14 | 53.13 |
| TraesCS2B01G229000.1 | Wheat | cytosol, peroxisome, plastid | 53.9 | 52.9 |
| Zm00001d021817_P001 | Maize | plastid | 53.66 | 52.67 |
| GSMUA_Achr9P24510_001 | Banana | plastid | 50.12 | 50.48 |
| CDX91383 | Canola | cytosol | 36.64 | 48.44 |
| CDY46975 | Canola | cytosol, mitochondrion, peroxisome | 34.52 | 46.95 |
| CDY40298 | Canola | cytosol, peroxisome, plastid | 39.01 | 45.71 |
| CDY70364 | Canola | cytosol, peroxisome | 38.53 | 45.03 |
| CDY53741 | Canola | plastid | 48.94 | 44.33 |
| CDY53743 | Canola | plastid | 48.94 | 44.23 |
| CDX92009 | Canola | plastid | 49.41 | 44.19 |
| CDY00978 | Canola | cytosol | 36.17 | 43.59 |
| HORVU2Hr1G084080.1 | Barley | cytosol, plastid | 15.84 | 42.95 |
| CDY37649 | Canola | mitochondrion, plastid | 43.26 | 42.56 |
| CDX74239 | Canola | plastid | 48.7 | 42.39 |
| CDX88554 | Canola | nucleus | 47.52 | 42.05 |
| CDY63003 | Canola | mitochondrion, plastid | 43.5 | 42.01 |
| CDY33350 | Canola | cytosol, nucleus, plastid | 47.52 | 41.88 |
| CDY35072 | Canola | cytosol, peroxisome, plastid | 47.52 | 41.7 |
| CDY56581 | Canola | cytosol | 33.33 | 41.47 |
| CDX80553 | Canola | cytosol | 33.1 | 41.42 |
| CDX72381 | Canola | cytosol | 31.91 | 41.41 |
| CDX88210 | Canola | cytosol | 32.86 | 41.12 |
| CDY28276 | Canola | cytosol | 31.68 | 41.1 |
| CDY45023 | Canola | cytosol | 31.68 | 41.1 |
| CDY18810 | Canola | cytosol, nucleus, peroxisome | 33.57 | 40.8 |
| CDY13509 | Canola | cytosol | 30.97 | 40.18 |
| CDX87369 | Canola | nucleus | 46.34 | 39.84 |
| CDY53338 | Canola | cytosol, mitochondrion, nucleus | 34.28 | 38.87 |
| CDX97493 | Canola | cytosol | 30.5 | 38.86 |
| CDY28706 | Canola | cytosol, peroxisome, plastid | 48.46 | 38.68 |
| CDY19742 | Canola | nucleus | 34.04 | 38.61 |
| CDY05554 | Canola | nucleus | 33.57 | 38.59 |
| CDY62635 | Canola | cytosol, mitochondrion, peroxisome, plastid | 34.99 | 38.44 |
| CDY51537 | Canola | cytosol, peroxisome, plastid | 48.23 | 38.27 |
| CDY25013 | Canola | nucleus | 33.57 | 37.87 |
| CDY34568 | Canola | cytosol | 12.06 | 36.43 |
| CDX95903 | Canola | nucleus | 29.79 | 35.9 |
| CDX92097 | Canola | nucleus | 29.55 | 35.61 |
| CDY50503 | Canola | nucleus | 29.55 | 35.61 |
| CDY67911 | Canola | nucleus | 29.55 | 35.61 |
| CDX74112 | Canola | plastid | 20.33 | 24.29 |
| CDY08060 | Canola | plastid | 19.86 | 23.73 |
| CDY18847 | Canola | cytosol | 18.2 | 23.62 |
| CDX82702 | Canola | nucleus | 17.97 | 16.89 |
| CDY05716 | Canola | cytosol | 27.42 | 10.77 |
| CDY35922 | Canola | cytosol | 27.42 | 10.73 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:18.4.24.2.5 | Gene3D:3.60.40.10 | GO:A0A078IPN4 | UniProt:A0A078IPN4 |
| EnsemblPlants:CDY51389 | ProteinID:CDY51389 | ProteinID:CDY51389.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004722 |
| GO:GO:0006464 | GO:GO:0006470 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 |
| GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00003316001 | InterPro:IPR001932 | InterPro:IPR036457 | PFAM:PF00481 | InterPro:PP2C |
| InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom | PFscan:PS51746 | PANTHER:PTHR13832 | PANTHER:PTHR13832:SF193 | SMART:SM00332 |
| SUPFAM:SSF81606 | UniParc:UPI0001B6404C | SEG:seg | : | : | : |
Description
BnaC08g46260DBnaC08g46260D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IPN4]
Coordinates
chrLK032991:+:56307..59479
Molecular Weight (calculated)
46661.9 Da
IEP (calculated)
5.380
GRAVY (calculated)
-0.456
Length
423 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGCVSKSNE ETIYRPRLGM GCCGSKMGRR TLSGRIVSLH DLVSIPNRIT SSGKSKSSCV FTQQGRKGVN QDSMIVWQDF MSKDMTFCGV FDGHGPNGHL
101: VSRKVRESLP VRLLSFMHSI QSKQNGSTSK SDSQEASEED KLKLLWEEAF LKSFNAMDKE LRSHPNVECF CSGSTAVTVI KQGSHLFMGN IGDSRAILGS
201: KDSNDSMVAV QLTVDLKPDL PREEERIKQC KGRVFALEDE PEVPRVWLPF DNAPGLAMAR AFGDFCVKDY GVISIPDFSH RLLTDRDQFI VLASDGVWDV
301: LSNEEVVEVV ASASSRASAA RLVVDSASRE WKLKYPTSKM DDCAVVCLFL DGKMDSESSD YEEQRSSSVE SDESQRGEPC LQRNATVRSS SVDNNRCGNV
401: NAEEKGTEGE QNSLVQLPRF SGD
101: VSRKVRESLP VRLLSFMHSI QSKQNGSTSK SDSQEASEED KLKLLWEEAF LKSFNAMDKE LRSHPNVECF CSGSTAVTVI KQGSHLFMGN IGDSRAILGS
201: KDSNDSMVAV QLTVDLKPDL PREEERIKQC KGRVFALEDE PEVPRVWLPF DNAPGLAMAR AFGDFCVKDY GVISIPDFSH RLLTDRDQFI VLASDGVWDV
301: LSNEEVVEVV ASASSRASAA RLVVDSASRE WKLKYPTSKM DDCAVVCLFL DGKMDSESSD YEEQRSSSVE SDESQRGEPC LQRNATVRSS SVDNNRCGNV
401: NAEEKGTEGE QNSLVQLPRF SGD
001: MGGCISKTSW SNEEPMHRPC LGMGCCGSKM GKRGFSDRMV SLHNLVSIPN RIIGNGKSRS SCIFTQQGRK GINQDAMIVW EDFMSKDVTF CGVFDGHGPH
101: GHLVARKVRD SLPVKLLSLL NSIKSKQNGP IGTRASKSDS LEAEKEESTE EDKLNFLWEE AFLKSFNAMD KELRSHPNLE CFCSGCTAVT IIKQGSNLYM
201: GNIGDSRAIL GSKDSNDSMI AVQLTVDLKP DLPREAERIK QCKGRVFALQ DEPEVSRVWL PFDNAPGLAM ARAFGDFCLK DYGVISIPEF SHRVLTDRDQ
301: FIVLASDGVW DVLSNEEVVE VVASATSRAS AARLVVDSAV REWKLKYPTS KMDDCAVVCL FLDGRMDSET SDNEEQCFSS ATNAVESDES QGAEPCLQRN
401: VTVRSLSTDQ ENNSYGKVIA EADNAEKEKT REGEQNWSGL EGVTRVNSLV QLPRFPGEEP KT
101: GHLVARKVRD SLPVKLLSLL NSIKSKQNGP IGTRASKSDS LEAEKEESTE EDKLNFLWEE AFLKSFNAMD KELRSHPNLE CFCSGCTAVT IIKQGSNLYM
201: GNIGDSRAIL GSKDSNDSMI AVQLTVDLKP DLPREAERIK QCKGRVFALQ DEPEVSRVWL PFDNAPGLAM ARAFGDFCLK DYGVISIPEF SHRVLTDRDQ
301: FIVLASDGVW DVLSNEEVVE VVASATSRAS AARLVVDSAV REWKLKYPTS KMDDCAVVCL FLDGRMDSET SDNEEQCFSS ATNAVESDES QGAEPCLQRN
401: VTVRSLSTDQ ENNSYGKVIA EADNAEKEKT REGEQNWSGL EGVTRVNSLV QLPRFPGEEP KT
Arabidopsis Description
PPC6-6Probable protein phosphatase 2C 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LR65]
SUBAcon: [peroxisome,plastid,nucleus,cytosol]
SUBAcon: [peroxisome,plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.