Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY46975 | Canola | cytosol, mitochondrion, peroxisome | 87.86 | 39.55 |
| CDX91383 | Canola | cytosol | 88.57 | 38.75 |
| CDX97493 | Canola | cytosol | 90.0 | 37.95 |
| CDY56581 | Canola | cytosol | 90.0 | 37.06 |
| CDY00978 | Canola | cytosol | 88.57 | 35.33 |
| CDY70364 | Canola | cytosol, peroxisome | 87.14 | 33.7 |
| CDY37649 | Canola | mitochondrion, plastid | 85.0 | 27.67 |
| CDY63003 | Canola | mitochondrion, plastid | 86.43 | 27.63 |
| AT5G36250.2 | Thale cress | plastid | 81.43 | 24.68 |
| KRH45222 | Soybean | nucleus | 32.86 | 19.83 |
| KRG93121 | Soybean | plastid | 37.86 | 14.52 |
| CDY53741 | Canola | plastid | 45.71 | 13.7 |
| KRH01535 | Soybean | cytosol | 44.29 | 13.63 |
| CDY53743 | Canola | plastid | 45.0 | 13.46 |
| CDX92009 | Canola | plastid | 44.29 | 13.11 |
| CDY67911 | Canola | nucleus | 32.86 | 13.11 |
| CDY50503 | Canola | nucleus | 32.86 | 13.11 |
| CDY40298 | Canola | cytosol, peroxisome, plastid | 33.57 | 13.02 |
| CDX74239 | Canola | plastid | 45.0 | 12.96 |
| CDY72270 | Canola | cytosol | 19.29 | 12.8 |
| CDY69821 | Canola | plastid | 35.71 | 12.72 |
| CDY51537 | Canola | cytosol, peroxisome, plastid | 47.86 | 12.57 |
| CDX95903 | Canola | nucleus | 31.43 | 12.54 |
| CDY28706 | Canola | cytosol, peroxisome, plastid | 46.43 | 12.26 |
| CDY62635 | Canola | cytosol, mitochondrion, peroxisome, plastid | 33.57 | 12.21 |
| CDY51389 | Canola | cytosol, peroxisome, plastid | 36.43 | 12.06 |
| CDX92097 | Canola | nucleus | 30.0 | 11.97 |
| CDY18810 | Canola | cytosol, nucleus, peroxisome | 28.57 | 11.49 |
| CDY21964 | Canola | plastid | 35.71 | 11.39 |
| CDY48559 | Canola | plastid | 35.71 | 11.36 |
| CDX72381 | Canola | cytosol | 26.43 | 11.35 |
| CDY33350 | Canola | cytosol, nucleus, plastid | 38.57 | 11.25 |
| CDX88210 | Canola | cytosol | 27.14 | 11.24 |
| CDX80553 | Canola | cytosol | 27.14 | 11.24 |
| CDX87369 | Canola | nucleus | 39.29 | 11.18 |
| CDY05554 | Canola | nucleus | 29.29 | 11.14 |
| CDY15466 | Canola | cytosol, peroxisome, plastid | 33.57 | 11.08 |
| CDY45023 | Canola | cytosol | 25.71 | 11.04 |
| CDY13509 | Canola | cytosol | 25.71 | 11.04 |
| CDY28276 | Canola | cytosol | 25.71 | 11.04 |
| CDY53338 | Canola | cytosol, mitochondrion, nucleus | 29.29 | 10.99 |
| CDY19742 | Canola | nucleus | 29.29 | 10.99 |
| CDY25013 | Canola | nucleus | 29.29 | 10.93 |
| CDX88554 | Canola | nucleus | 37.14 | 10.88 |
| CDX89881 | Canola | plastid | 32.86 | 10.82 |
| CDY35072 | Canola | cytosol, peroxisome, plastid | 37.14 | 10.79 |
| KRH36356 | Soybean | cytosol | 12.86 | 8.65 |
| CDY18847 | Canola | cytosol | 17.86 | 7.67 |
| CDY08060 | Canola | plastid | 19.29 | 7.63 |
| CDX74112 | Canola | plastid | 18.57 | 7.34 |
| CDX82702 | Canola | nucleus | 14.29 | 4.44 |
| CDY05716 | Canola | cytosol | 22.86 | 2.97 |
| CDY35922 | Canola | cytosol | 22.86 | 2.96 |
| KRH45221 | Soybean | cytosol, mitochondrion, peroxisome | 1.43 | 1.17 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | Gene3D:3.60.40.10 | MapMan:35.1 | GO:A0A078HCR9 | UniProt:A0A078HCR9 |
| EnsemblPlants:CDY34568 | ProteinID:CDY34568 | ProteinID:CDY34568.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004722 |
| GO:GO:0006464 | GO:GO:0006470 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 |
| GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00056996001 | InterPro:IPR036457 | InterPro:PP2C | InterPro:PPM-type_dom_sf | PANTHER:PTHR13832 |
| PANTHER:PTHR13832:SF510 | SUPFAM:SSF81606 | UniParc:UPI0004EEB9E0 | : | : | : |
Description
BnaC03g56680DBnaC03g56680D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HCR9]
Coordinates
chrLK032337:+:159728..160355
Molecular Weight (calculated)
15766.9 Da
IEP (calculated)
4.751
GRAVY (calculated)
-0.180
Length
140 amino acids
Sequence
(BLAST)
(BLAST)
001: MFQNFGSMED TVFCGVFDGH GPYGHVIAKR VWDLLPLKLG SHLESYLSCE EVLKEISLNI ADRMTSDSLV QISANGESQV YNKDQDTVQM LLTSIVKAYR
101: FMDKELKMQV DVDCFCSGTT AVTMVKQVRE NGYHGDEALR
101: FMDKELKMQV DVDCFCSGTT AVTMVKQVRE NGYHGDEALR
001: MGSCLSSSGG GGSRRSLHGS PHVPGPGRRK RPPKRRPGSC SSSFDNTEEP LLHRIPGRMF LNGSTDTVSL FSQQGKKGPN QDAMIVWENF GSMEDTVFCG
101: VFDGHGPYGH IVAKRVRDLL PLKLGSHLES YVSPEEVLKE ISLNTDDRKI SEDLVHISAN GESRVYNKDY VKDQDMIQML IGSIVKAYRF MDKELKMQVD
201: VDCFCSGTTA VTMVKQGQHL VIGNIGDSRA VLGVRNKDNK LVPFQLTEDL KPDVPAEAER IKRCRGRIFA LRDEPGVARL WLPNHNSPGL AMARAFGDFC
301: LKDFGLISVP DVSYRRLTEK DEFVVLATDG IWDALTNEEV VKIVAKAPTR SSAGRALVEA AVRNWRWKFP TSKVDDCAVV CLFLDSEPNR LSTASFSKEK
401: HINNGVTEPE PDTASSSTPD SGTGSPELNG VNRIDTLVNL PVYVPTKE
101: VFDGHGPYGH IVAKRVRDLL PLKLGSHLES YVSPEEVLKE ISLNTDDRKI SEDLVHISAN GESRVYNKDY VKDQDMIQML IGSIVKAYRF MDKELKMQVD
201: VDCFCSGTTA VTMVKQGQHL VIGNIGDSRA VLGVRNKDNK LVPFQLTEDL KPDVPAEAER IKRCRGRIFA LRDEPGVARL WLPNHNSPGL AMARAFGDFC
301: LKDFGLISVP DVSYRRLTEK DEFVVLATDG IWDALTNEEV VKIVAKAPTR SSAGRALVEA AVRNWRWKFP TSKVDDCAVV CLFLDSEPNR LSTASFSKEK
401: HINNGVTEPE PDTASSSTPD SGTGSPELNG VNRIDTLVNL PVYVPTKE
Arabidopsis Description
Protein phosphatase 2C family protein [Source:TAIR;Acc:AT5G36250]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.