CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, plastid, cytosol

Predictor Summary:

nucleus 1
peroxisome 1
mitochondrion 2
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY40298	Canola	cytosol, peroxisome, plastid	79.48	84.76
Bra009643.1-P	Field mustard	cytosol, peroxisome, plastid	78.96	84.21
AT5G01700.2	Thale cress	cytosol, peroxisome, plastid	70.39	70.94
CDY72270	Canola	cytosol	29.09	53.08
KRH76051	Soybean	cytoskeleton, cytosol, peroxisome	36.88	48.97
KRH65540	Soybean	cytosol	24.94	46.83
CDX91383	Canola	cytosol	36.88	44.38
KRH65533	Soybean	cytosol	23.9	43.6
CDY46975	Canola	cytosol, mitochondrion, peroxisome	34.81	43.09
VIT_08s0058g00660.t01	Wine grape	cytosol	41.3	40.36
KRH65545	Soybean	cytosol, peroxisome, plastid	23.12	40.09
CDY00978	Canola	cytosol	36.36	39.89
KRH00350	Soybean	cytosol, peroxisome, plastid	43.38	39.39
CDY70364	Canola	cytosol, peroxisome	36.62	38.95
KRH40835	Soybean	nucleus, peroxisome, plastid	43.9	38.94
CDX80553	Canola	cytosol	34.03	38.76
GSMUA_Achr7P22300_001	Banana	cytosol, peroxisome, plastid	42.34	38.72
TraesCS5A01G150700.1	Wheat	cytosol	42.86	38.64
TraesCS5D01G155800.1	Wheat	cytosol	42.86	38.64
HORVU5Hr1G047410.12	Barley	cytosol, peroxisome, plastid	42.86	38.46
TraesCS5B01G149300.1	Wheat	cytosol	42.6	38.41
Os11t0109000-01	Rice	cytosol, peroxisome, plastid	41.82	38.33
CDY18810	Canola	cytosol, nucleus, peroxisome	34.55	38.22
Solyc10g076320.1.1	Tomato	nucleus	43.12	38.07
CDX88210	Canola	cytosol	33.25	37.87
CDY69821	Canola	plastid	38.44	37.66
PGSC0003DMT400028836	Potato	nucleus	44.16	37.61
CDY56581	Canola	cytosol	32.99	37.35
PGSC0003DMT400030965	Potato	nucleus	43.12	37.3
Solyc10g085370.1.1	Tomato	cytosol, nucleus, peroxisome	43.38	36.87
CDY53338	Canola	cytosol, mitochondrion, nucleus	35.58	36.73
CDY05554	Canola	nucleus	35.06	36.68
CDY19742	Canola	nucleus	35.32	36.46
Os12t0108600-00	Rice	cytosol, peroxisome, plastid	42.86	36.26
CDY28276	Canola	cytosol	30.65	36.2
CDY45023	Canola	cytosol	30.65	36.2
CDY67911	Canola	nucleus	32.99	36.18
CDY50503	Canola	nucleus	32.99	36.18
CDX95903	Canola	nucleus	32.73	35.9
CDX97493	Canola	cytosol	30.91	35.84
CDX92097	Canola	nucleus	32.47	35.61
CDX72381	Canola	cytosol	30.13	35.58
CDY37649	Canola	mitochondrion, plastid	39.74	35.58
CDY25013	Canola	nucleus	34.55	35.47
CDY63003	Canola	mitochondrion, plastid	40.26	35.39
CDY15466	Canola	cytosol, peroxisome, plastid	38.7	35.14
CDY51389	Canola	cytosol, peroxisome, plastid	38.44	34.99
CDY13509	Canola	cytosol	29.61	34.97
CDY53741	Canola	plastid	42.34	34.9
CDY53743	Canola	plastid	42.34	34.83
CDX89881	Canola	plastid	38.18	34.59
CDY21964	Canola	plastid	38.7	33.94
CDY48559	Canola	plastid	38.7	33.86
CDX92009	Canola	plastid	41.56	33.83
CDY34568	Canola	cytosol	12.21	33.57
Zm00001d005071_P001	Maize	cytosol	41.04	33.4
EES07864	Sorghum	cytosol, nucleus, peroxisome	40.78	33.05
CDX74239	Canola	plastid	41.04	32.51
KXG22794	Sorghum	cytosol, nucleus, peroxisome	41.56	31.81
CDX88554	Canola	nucleus	37.92	30.54
CDY33350	Canola	cytosol, nucleus, plastid	37.92	30.42
CDY35072	Canola	cytosol, peroxisome, plastid	37.92	30.29
KRH65575	Soybean	cytosol	8.57	30.0
CDY28706	Canola	cytosol, peroxisome, plastid	41.04	29.81
CDY51537	Canola	cytosol, peroxisome, plastid	41.04	29.64
CDX87369	Canola	nucleus	37.4	29.27
CDX74112	Canola	plastid	22.34	24.29
CDY08060	Canola	plastid	22.08	24.01
CDY18847	Canola	cytosol	20.26	23.93
CDX82702	Canola	nucleus	15.58	13.33
CDY05716	Canola	cytosol	23.12	8.26
CDY35922	Canola	cytosol	23.12	8.23

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.5	Gene3D:3.60.40.10	GO:A0A078J7H0	UniProt:A0A078J7H0
EnsemblPlants:CDY62635	ProteinID:CDY62635	ProteinID:CDY62635.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00036475001	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF507	SMART:SM00332
SUPFAM:SSF81606	UniParc:UPI0004EE9F63	SEG:seg	:	:	:

Description

BnaCnng40630DBnaCnng40630D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J7H0]

Coordinates

chrLK034173:-:12018..13568

Molecular Weight (calculated)

42265.7 Da

IEP (calculated)

5.563

GRAVY (calculated)

-0.503

Length

385 amino acids

Sequence
(BLAST)

001: MRKEARRSAA DTPIGQVEGR GRGRTPNSGE FARGGRTVDG DRGEEIEEEA RWEEWKGSGG SGGEGGGRER SPTEAGGHEP EASMENQKFA RLNFGGEEDM
101: IFCGVFDGHG PMGHKISRHV CDSLPSRVHS RIKSSNISSQ SRQEEGLFCE LEEVLVTFFK RIDSELGLDS PYDSFCSGTT AVTVLKQGDC LVIANLGDSR
201: AVLGTRGGKS SLKAVQLTVD LKPCVQREAE RIVSCKGRVF AMEEEPDVYR VWMPDDDCPG LAMSRAFGDF CLKDYGLLCI PEVFCRKVSR DDEFVVLATD
301: GIWDVLSNEE VVKIVGACKD RSIAAETLVQ RAARSWRTKF PASKADDCAV VVLFLNHRPY PREGNVSRAV STLSWRSGKS NNEGH

Best Arabidopsis Sequence Match ( AT5G01700.1 )
(BLAST)

001: MSIKQGKKGI NQDAMTVWEN FGGEEDTIFC GVFDGHGPMG HKISRHVCEN LPSRVHSKIR SSKSAGDENI ENNSSQSQEE LFREFEDILV TFFKQIDSEL
101: GLDSPYDSFC SGTTAVTVFK QADCLVIANL GHSRAVLGTR SKNSFKAVQL TVDLKPCVQR EAERIVSCKG RVFAMEEEPD VYRVWMPDDD CPGLAMSRAF
201: GDFCLKDYGL VCIPDVFCRK VSREDEFVVL ATDGIWDVLS NEEVVKVVGS CKDRSVAAEM LVQRAARTWR TKFPASKADD CAVVVLYLNH RPYPREGNVS
301: RAISTISWRS NKSNNECYGA APLSPLGLSQ RVS

Arabidopsis Description

Probable protein phosphatase 2C 65 [Source:UniProtKB/Swiss-Prot;Acc:Q6NKS1]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.