Factsheet for TraesCS5D01G155800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G149300.1	Wheat	cytosol	98.36	98.36
TraesCS5A01G150700.1	Wheat	cytosol	97.19	97.19
HORVU5Hr1G047410.12	Barley	cytosol, peroxisome, plastid	96.72	96.27
Os11t0109000-01	Rice	cytosol, peroxisome, plastid	78.22	79.52
Os12t0108600-00	Rice	cytosol, peroxisome, plastid	76.81	72.09
EES07864	Sorghum	cytosol, nucleus, peroxisome	72.6	65.26
Zm00001d005071_P001	Maize	cytosol	70.02	63.21
KXG22794	Sorghum	cytosol, nucleus, peroxisome	73.3	62.23
GSMUA_Achr7P22300_001	Banana	cytosol, peroxisome, plastid	52.69	53.44
KRH76051	Soybean	cytoskeleton, cytosol, peroxisome	34.19	50.34
VIT_08s0058g00660.t01	Wine grape	cytosol	44.96	48.73
Bra009643.1-P	Field mustard	cytosol, peroxisome, plastid	40.52	47.92
CDY40298	Canola	cytosol, peroxisome, plastid	40.52	47.92
KRH65540	Soybean	cytosol	22.48	46.83
AT5G01700.2	Thale cress	cytosol, peroxisome, plastid	40.75	45.55
KRH40835	Soybean	nucleus, peroxisome, plastid	44.73	44.01
KRH00350	Soybean	cytosol, peroxisome, plastid	43.33	43.63
TraesCS6D01G178400.1	Wheat	cytosol, nucleus, peroxisome	36.53	43.45
TraesCS4D01G159700.1	Wheat	cytosol	44.5	43.38
CDY62635	Canola	cytosol, mitochondrion, peroxisome, plastid	38.64	42.86
Solyc10g076320.1.1	Tomato	nucleus	43.33	42.43
KRH65533	Soybean	cytosol	20.84	42.18
PGSC0003DMT400030965	Potato	nucleus	43.79	42.02
KRH65575	Soybean	cytosol	10.77	41.82
TraesCS2D01G214200.1	Wheat	cytosol, peroxisome, plastid	41.69	41.3
Solyc10g085370.1.1	Tomato	cytosol, nucleus, peroxisome	42.62	40.18
PGSC0003DMT400028836	Potato	nucleus	42.39	40.04
KRH65545	Soybean	cytosol, peroxisome, plastid	20.37	39.19
TraesCS1D01G230000.2	Wheat	cytosol, peroxisome, plastid	33.72	39.13
TraesCS1D01G229600.2	Wheat	mitochondrion	33.49	38.96
TraesCS1D01G229700.1	Wheat	mitochondrion	33.26	38.59
TraesCS7D01G240800.1	Wheat	mitochondrion	45.9	34.09
TraesCS6D01G181000.1	Wheat	mitochondrion	39.58	32.63
TraesCS2D01G273100.1	Wheat	mitochondrion	38.41	31.0
TraesCS2D01G144500.3	Wheat	cytosol	21.08	19.52
TraesCS6D01G174700.1	Wheat	plastid	23.65	9.3

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.5	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF507	SMART:SM00332
SUPFAM:SSF81606	EnsemblPlantsGene:TraesCS5D01G155800	EnsemblPlants:TraesCS5D01G155800.1	TIGR:cd00143	SEG:seg	:

Description

No Description!

Coordinates

chr5D:-:244108015..244110211

Molecular Weight (calculated)

46755.0 Da

IEP (calculated)

5.361

GRAVY (calculated)

-0.406

Length

427 amino acids

Sequence
(BLAST)

001: MGICCSREGG GRELEETEGW FPWKHDDFLQ EQLAGAAGVS MHTKQGWKGV NQDAMAACQD FAGHKGQIFC GVFDGHGPLG RDVARHVRDS LPKKLSASLA
101: PRAEDDAPSS NSNADVDSFD KSDCTSSSDT SDEHQLLSSW KSLIVKAFED VDEELRQHSR IDCICSGTTA VTVVRQGDHL IIANLGDSRA VLCARDSKGR
201: PVSVQITTDL KPDLPGEAER ILSCKGRIFA MDDEPDVPRL WLPDQDAPGL AMARAFGDFC LKNHGLICTP EVYYRKLSEK DDFLVLATDG IWDVLSNKEV
301: VKIVSSVSDR SKAAKQLVDR AVRAWRRKFP TSMVDDCAAV CLFLKPAAIS SEEDSTTKPP HAPVLSFTGS FRKALGGGEA EEGTAVWRAL EGVARVNSVI
401: RLPRMLSRRW RSASMDENND QESSKVD

Best Arabidopsis Sequence Match ( AT1G16220.1 )
(BLAST)

001: MGLCHSKIDK TTRKETGATS TATTTVERQS SGRLRRPRDL YSGGEISEIQ QVVGRLVGNG SSEIACLYTQ QGKKGTNQDA MLVWENFCSR SDTVLCGVFD
101: GHGPFGHMVS KRVRDMLPFT LSTQLKTTSG TEQSSSKNGL NSAPTCVDEE QWCELQLCEK DEKLFPEMYL PLKRALLKTC QQMDKELKMH PTINCFCSGT
201: TSVTVIKQGK DLVVGNIGDS RAVLATRDQD NALVAVQLTI DLKPDLPSES ARIHRCKGRV FALQDEPEVA RVWLPNSDSP GLAMARAFGD FCLKDYGLIS
301: VPDINYHRLT ERDQYIILAT DGVWDVLSNK EAVDIVASAP SRDTAARAVV DTAVRAWRLK YPTSKNDDCA VVCLFLEDTS AGGTVEVSET VNHSHEESTE
401: SVTITSSKDA DKKEEASTET NETVPVWEIK EEKTPESCRI ESKKTTLAEC ISVKDDEEWS ALEGLTRVNS LLSIPRFFSG ELRSSSWRKW L

Arabidopsis Description

Probable protein phosphatase 2C 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA22]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.