CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, nucleus

Predictor Summary:

nucleus 3
peroxisome 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH00350	Soybean	cytosol, peroxisome, plastid	93.32	95.52
KRH76051	Soybean	cytoskeleton, cytosol, peroxisome	44.93	67.24
KRH65540	Soybean	cytosol	29.72	62.93
KRH65575	Soybean	cytosol	14.98	59.09
KRH65533	Soybean	cytosol	27.88	57.35
KRH65545	Soybean	cytosol, peroxisome, plastid	28.11	54.95
KRH45221	Soybean	cytosol, mitochondrion, peroxisome	20.74	52.63
CDY40298	Canola	cytosol, peroxisome, plastid	43.09	51.8
Bra009643.1-P	Field mustard	cytosol, peroxisome, plastid	42.86	51.52
VIT_08s0058g00660.t01	Wine grape	cytosol	46.08	50.76
AT5G01700.2	Thale cress	cytosol, peroxisome, plastid	44.01	50.0
Solyc10g076320.1.1	Tomato	nucleus	50.0	49.77
PGSC0003DMT400030965	Potato	nucleus	50.46	49.21
GSMUA_Achr7P22300_001	Banana	cytosol, peroxisome, plastid	47.0	48.46
KRH45219	Soybean	vacuole	10.6	48.42
PGSC0003DMT400028836	Potato	nucleus	47.7	45.8
Os11t0109000-01	Rice	cytosol, peroxisome, plastid	44.24	45.71
Solyc10g085370.1.1	Tomato	cytosol, nucleus, peroxisome	47.7	45.7
KRH36356	Soybean	cytosol	21.89	45.67
TraesCS5B01G149300.1	Wheat	cytosol	44.47	45.2
TraesCS5A01G150700.1	Wheat	cytosol	44.47	45.2
HORVU5Hr1G047410.12	Barley	cytosol, peroxisome, plastid	44.24	44.76
TraesCS5D01G155800.1	Wheat	cytosol	44.01	44.73
CDY62635	Canola	cytosol, mitochondrion, peroxisome, plastid	38.94	43.9
KRH52174	Soybean	cytoskeleton, cytosol, peroxisome	34.56	43.73
Os12t0108600-00	Rice	cytosol, peroxisome, plastid	44.93	42.86
KRG93121	Soybean	plastid	35.48	42.19
KRH05503	Soybean	cytoskeleton, cytosol, peroxisome	33.41	42.15
KRH40292	Soybean	plastid	46.77	41.51
KRH00931	Soybean	plastid	46.31	41.27
KRH68473	Soybean	cytosol, mitochondrion, peroxisome	35.25	41.24
EES07864	Sorghum	cytosol, nucleus, peroxisome	44.7	40.84
KRG96758	Soybean	cytosol, mitochondrion, peroxisome	34.56	40.65
KRH33864	Soybean	nucleus	34.33	40.49
KRH50799	Soybean	cytosol	34.1	40.33
KRG92929	Soybean	nucleus	34.1	40.33
KRH01535	Soybean	cytosol	41.94	40.0
Zm00001d005071_P001	Maize	cytosol	43.55	39.96
KRH56012	Soybean	nucleus	42.86	39.49
KRH25524	Soybean	nucleus	42.63	39.28
KRH15511	Soybean	cytosol, nucleus, peroxisome	21.43	39.08
KRH02293	Soybean	cytosol	33.64	38.83
KRH26917	Soybean	cytosol, plastid	41.94	38.4
KXG22794	Sorghum	cytosol, nucleus, peroxisome	44.24	38.17
KRH22416	Soybean	nucleus, plastid	41.71	38.11
KRH45222	Soybean	nucleus	12.9	24.14
KRH50972	Soybean	cytosol	21.43	21.99
KRH02158	Soybean	cytosol	20.51	21.39
KRH20951	Soybean	plastid	21.2	21.35
KRH11326	Soybean	cytosol, mitochondrion, nucleus, plastid	21.2	21.35
KRH39350	Soybean	cytosol	24.42	9.86
KRH76332	Soybean	cytosol	23.73	9.4

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100783603	MapMan:18.4.24.2.5	Gene3D:3.60.40.10	EMBL:ACUP02006062
EnsemblPlantsGene:GLYMA_09G280700	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722	GO:GO:0006464	GO:GO:0006470
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	UniProt:I1L765
InterPro:IPR001932	InterPro:IPR036457	EnsemblPlants:KRH40835	ProteinID:KRH40835	ProteinID:KRH40835.1	PFAM:PF00481
InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF199
SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI0002338D1D	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr9:+:49577780..49581754

Molecular Weight (calculated)

48644.9 Da

IEP (calculated)

4.897

GRAVY (calculated)

-0.504

Length

434 amino acids

Sequence
(BLAST)

001: MGGCCSHDVS VRGKVESEMD DREYEYDYEN DVSYQQGGAL VRLRGSSRFA SMYSQQGQKG VNQDAMTVWE DYTGEKDVIF CGVFDGHGPL GHKVSQFIRD
101: NLPSKLSAAI EISQQKTIKY YDANDAETGS FDDAYDDNNH NMSLASWEGC LLKSFDEMDE YLAQEINTDS YCSGCTAVTL IKQGDQLIVG NLGDSRAVLC
201: TRDRDQLIPV QLTVDLKPDI PSETSRIVNC EGRVFAAEEE PDVYRIWMPD DDCPGLAMSR AFGDFCLKDY GLISVPDVFY RKITPQDEFV VLATDGVWDV
301: LTNSEVINIV ASAPRRSIAA KLLVKRAVRA WRYKYPGSKV DDCAVICLFL DAQSALSHSQ SYSNRKSRQR SKHLNRTKST RNEDNETVYG KVGVELDEEW
401: KALGGFARAN SLSKLPRLAR GMSKRQSSKY YIPS

Best Arabidopsis Sequence Match ( AT5G01700.2 )
(BLAST)

001: MGVCCSKGTG IIVEHGADDG NECGDGEAEV RDTNDGAVVR TRGSSKHVSM SIKQGKKGIN QDAMTVWENF GGEEDTIFCG VFDGHGPMGH KISRHVCENL
101: PSRVHSKIRS SKSAGDENIE NNSSQSQEEL FREFEDILVT FFKQIDSELG LDSPYDSFCS GTTAVTVFKQ ADCLVIANLG HSRAVLGTRS KNSFKAVQLT
201: VDLKPCVQRE AERIVSCKGR VFAMEEEPDV YRVWMPDDDC PGLAMSRAFG DFCLKDYGLV CIPDVFCRKV SREDEFVVLA TDGIWDVLSN EEVVKVVGSC
301: KDRSVAAEML VQRAARTWRT KFPASKADDC AVVVLYLNHR PYPREGNVSR AISTISWRSN KSNNECYGAA PLSPLGLSQR VS

Arabidopsis Description

Probable protein phosphatase 2C 65 [Source:UniProtKB/Swiss-Prot;Acc:Q6NKS1]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.