Factsheet for VIT_08s0058g00660.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH76051	Soybean	cytoskeleton, cytosol, peroxisome	39.59	53.79
KRH65540	Soybean	cytosol	27.16	52.2
GSMUA_Achr7P22300_001	Banana	cytosol, peroxisome, plastid	51.78	48.46
Os11t0109000-01	Rice	cytosol, peroxisome, plastid	51.52	48.33
CDY40298	Canola	cytosol, peroxisome, plastid	42.89	46.81
Bra009643.1-P	Field mustard	cytosol, peroxisome, plastid	42.64	46.54
KRH65533	Soybean	cytosol	24.87	46.45
KRH40835	Soybean	nucleus, peroxisome, plastid	50.76	46.08
Solyc10g076320.1.1	Tomato	nucleus	50.51	45.64
TraesCS5A01G150700.1	Wheat	cytosol	49.24	45.43
KRH00350	Soybean	cytosol, peroxisome, plastid	48.73	45.28
Os12t0108600-00	Rice	cytosol, peroxisome, plastid	52.28	45.27
PGSC0003DMT400030965	Potato	nucleus	51.02	45.17
HORVU5Hr1G047410.12	Barley	cytosol, peroxisome, plastid	48.98	44.99
TraesCS5D01G155800.1	Wheat	cytosol	48.73	44.96
TraesCS5B01G149300.1	Wheat	cytosol	48.73	44.96
AT5G01700.2	Thale cress	cytosol, peroxisome, plastid	43.15	44.5
KRH65545	Soybean	cytosol, peroxisome, plastid	24.87	44.14
PGSC0003DMT400028836	Potato	nucleus	48.48	42.26
Solyc10g085370.1.1	Tomato	cytosol, nucleus, peroxisome	48.48	42.16
EES07864	Sorghum	cytosol, nucleus, peroxisome	50.25	41.68
CDY62635	Canola	cytosol, mitochondrion, peroxisome, plastid	40.36	41.3
Zm00001d005071_P001	Maize	cytosol	49.24	41.01
VIT_12s0059g01820.t01	Wine grape	plastid	48.22	40.17
VIT_14s0060g02070.t01	Wine grape	mitochondrion	37.31	40.16
VIT_04s0008g00740.t01	Wine grape	cytosol	35.53	40.11
KRH65575	Soybean	cytosol	11.17	40.0
VIT_04s0023g00690.t01	Wine grape	plastid	48.98	39.71
KXG22794	Sorghum	cytosol, nucleus, peroxisome	50.51	39.56
VIT_19s0015g01920.t01	Wine grape	mitochondrion, nucleus, peroxisome	48.73	37.57
VIT_05s0077g01820.t01	Wine grape	cytosol, mitochondrion, peroxisome, plastid	37.06	36.32
VIT_05s0020g02360.t01	Wine grape	cytosol	21.07	21.34
VIT_11s0016g03430.t01	Wine grape	cytosol	25.63	9.33

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100256885	wikigene:100256885	MapMan:18.4.24.2.5	Gene3D:3.60.40.10
EMBL:AM457319	ProteinID:CAN65584	ProteinID:CAN65584.1	ProteinID:CCB44807	ProteinID:CCB44807.1	UniProt:F6GXS7
EMBL:FN594967	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722	GO:GO:0006464	GO:GO:0006470
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932
InterPro:IPR036457	EntrezGene:LOC100256885	wikigene:LOC100256885	PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf
InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF199	SMART:SM00332	SUPFAM:SSF81606
UniParc:UPI000210A62B	ArrayExpress:VIT_08s0058g00660	EnsemblPlantsGene:VIT_08s0058g00660	EnsemblPlants:VIT_08s0058g00660.t01	RefSeq:XP_002264900	RefSeq:XP_002264900.2

Description

No Description!

Coordinates

chr8:-:9778439..9780659

Molecular Weight (calculated)

43699.8 Da

IEP (calculated)

8.264

GRAVY (calculated)

-0.434

Length

394 amino acids

Sequence
(BLAST)

001: MFTQGGRKGI NQDAMTVWED FSGEKGMFFC AVLDGHGPSG HHVAGLVRDI LPSRLSSAFK LSLPNSSKCD SDIVHGNHKD DSKDSHENKN FEYPLFPLWK
101: ASLIKSFEEM DEELGSNSTF DSFCSGTTAV TVIKQEDHLI IANLGDSRAV LCTRGNRNQL VPVQLTVDLK PNLPSEAERI KNCKGRVFAL PDESGVYRLW
201: MPDQNSPGLA MTRAFGDFCL KDYGLISIPD VSYRKLTDKD EFVVLASDGV WDVLSNSEVT RIVASAKKRS MAAQLLVDRA VREWKIKYPG CKTDDCAVIC
301: LFLKTPPLST KSTSKNGRDG VNNHQQLAVS QRSATRRSQQ GCESTKANSK EEYSALQGVT RENSLLSLPR FSTVLGRRRS INQPSTLKLF EVHN

Best Arabidopsis Sequence Match ( AT3G02750.1 )
(BLAST)

001: MGSCLSAESR SPRPGSPCSP AFSVRKRKNS KKRPGSRNSS FDYRREEPLN QVPGRMFLNG STEVACIYTQ QGKKGPNQDA MVVWENFGSR TDTIFCGVFD
101: GHGPYGHMVA KRVRDNLPLK LSAYWEAKVP VEGVLKAITT DTVNNVTNIN NPEDAAAAAA FVTAEEEPRT SADMEEENTE TQPELFQTLK ESFLKAFKVM
201: DRELKFHGSV DCFCSGTTAV TLIKQGQYLV VGNVGDSRAV MGTRDSENTL VAVQLTVDLK PNLPAEAERI RKCRGRVFAL RDEPEVCRVW LPNCDSPGLA
301: MARAFGDFCL KDFGLISVPD VSFRQLTEKD EFIVLATDGI WDVLSNEDVV AIVASAPSRS SAARALVESA VRAWRYKYPT SKVDDCAAVC LYLDSSNTNA
401: ISTASSISKL EDGEEEELKA TTEDDDASGP SGLGRSSTVR SGKEIALDES ETEKLIKEAD NLDSEPGTEY SALEGVARVN TLLNLPRFVP GK

Arabidopsis Description

Protein phosphatase 2C family protein [Source:TAIR;Acc:AT3G02750]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.