Factsheet for VIT_05s0077g01820.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, plastid, cytosol

Predictor Summary:

nucleus 2
peroxisome 1
mitochondrion 2
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	mitochondrion	58.21	68.42
VIT_14s0060g02070.t01	Wine grape	mitochondrion	61.44	67.49
GSMUA_Achr8P10330_001	Banana	mitochondrion, nucleus	56.72	65.14
KRH50799	Soybean	cytosol	58.71	64.31
PGSC0003DMT400015950	Potato	plastid	55.97	62.85
Solyc01g065700.2.1	Tomato	nucleus	55.97	62.33
KRH02293	Soybean	cytosol	58.21	62.23
TraesCS1A01G228100.1	Wheat	mitochondrion	50.99	60.65
CDY50503	Canola	nucleus	52.74	60.4
CDY67911	Canola	nucleus	52.49	60.11
Bra021202.1-P	Field mustard	nucleus	52.24	59.83
TraesCS1B01G242400.1	Wheat	cytosol, peroxisome, plastid	50.5	59.71
EES19385	Sorghum	mitochondrion, nucleus, peroxisome, plastid	51.99	59.21
TraesCS1B01G242300.1	Wheat	mitochondrion	49.5	58.7
Zm00001d037949_P001	Maize	mitochondrion	51.49	58.64
TraesCS1B01G242200.1	Wheat	mitochondrion	49.25	58.41
AT3G16800.2	Thale cress	nucleus	50.5	57.83
HORVU1Hr1G059090.7	Barley	cytosol, peroxisome, plastid	50.5	57.67
TraesCS1B01G033400.1	Wheat	cytosol, peroxisome	32.34	57.27
Bra022179.1-P	Field mustard	nucleus	49.01	56.13
CDX95903	Canola	nucleus	48.76	55.84
CDX92097	Canola	nucleus	48.51	55.56
Os05t0358500-01	Rice	mitochondrion	48.51	55.24
TraesCS1D01G229700.1	Wheat	mitochondrion	50.25	54.89
TraesCS1D01G230000.2	Wheat	cytosol, peroxisome, plastid	50.25	54.89
TraesCS1A01G228000.1	Wheat	mitochondrion, peroxisome, plastid	50.75	54.69
HORVU1Hr1G059130.3	Barley	mitochondrion	50.99	54.38
TraesCS1D01G229600.2	Wheat	mitochondrion	49.5	54.22
HORVU1Hr1G059140.2	Barley	mitochondrion, plastid	29.6	44.74
TraesCS1A01G228200.1	Wheat	mitochondrion	42.79	44.68
TraesCS7B01G361000.1	Wheat	mitochondrion, peroxisome, plastid	35.32	40.57
VIT_04s0008g00740.t01	Wine grape	cytosol	34.83	40.11
VIT_08s0058g00660.t01	Wine grape	cytosol	36.32	37.06
VIT_04s0023g00690.t01	Wine grape	plastid	43.03	35.6
VIT_12s0059g01820.t01	Wine grape	plastid	37.56	31.92
VIT_19s0015g01920.t01	Wine grape	mitochondrion, nucleus, peroxisome	38.81	30.53
VIT_05s0020g02360.t01	Wine grape	cytosol	22.39	23.14
VIT_11s0016g03430.t01	Wine grape	cytosol	24.63	9.14

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100256894	wikigene:100256894	MapMan:18.4.24.2.5	Gene3D:3.60.40.10
ProteinID:CCB48016	ProteinID:CCB48016.1	UniProt:F6H6X4	EMBL:FN595246	GO:GO:0000226	GO:GO:0003674
GO:GO:0003824	GO:GO:0004722	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0006464	GO:GO:0006470	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152
GO:GO:0009628	GO:GO:0009819	GO:GO:0009987	GO:GO:0016043	GO:GO:0016787	GO:GO:0019538
GO:GO:0040007	GO:GO:0045926	InterPro:IPR001932	InterPro:IPR036457	EntrezGene:LOC100256894	wikigene:LOC100256894
PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832
PANTHER:PTHR13832:SF310	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI0002109ABD	ArrayExpress:VIT_05s0077g01820	EnsemblPlantsGene:VIT_05s0077g01820
EnsemblPlants:VIT_05s0077g01820.t01	unigene:Vvi.17812	RefSeq:XP_002272978	RefSeq:XP_002272978.2	:	:

Description

No Description!

Coordinates

chr5:-:1430324..1433192

Molecular Weight (calculated)

44605.4 Da

IEP (calculated)

6.265

GRAVY (calculated)

-0.233

Length

402 amino acids

Sequence
(BLAST)

001: MLFRGSRLRP CLVGETRENF SLCDLEGRPM ENLLALFDAL MRNISLMKGE SWRSDVGREA AESLAKEARG NNLMLTSPGI INSRGSSNFA SVFSKKGKKG
101: VNQDCFIVWE EFGCQEDMTF CGIFDGHGLW GHHVAKRVRK LMPSFLLCHW QETLALAQGF DMMGLDRNLC PFDIWRQSYL KTCAAIDEEL EQHADLDSFR
201: SGTTALTIVR QGELIIIANV GDSRAVLGTT SDDGSLVAVQ LTVDFKPNLP QEAERITKSR GQVYCLQDEP GVYRVWMPNT KTPGLAISRA FGDYCMKDFG
301: VISVPEVTQR NITSRDQFAI LATDGVWDVI SNQEAVEIVS SAPDRNKSAK RLVECAVDAW KRKKRGVATD DITAICLFFH PSPSQQGNNA KVLEEAGMTK
401: AG

Best Arabidopsis Sequence Match ( AT5G27930.1 )
(BLAST)

001: MGHFSSMFNG LARSFSIKKV KNNNGNCDAK EAADEMASEA KKKELILKSS GYVNVQGSNN LASLFSKRGE KGVNQDCALV WEGFGCQEDM IFCGIFDGHG
101: PWGHYVAKQV RNSMPLSLLC NWQKILAQAT LEPELDLEGS NKKISRFDIW KQSYLKTCAT VDQELEHHRK IDSYYSGTTA LTIVRQGEVI YVANVGDSRA
201: VLAMESDEGS LVAVQLTLDF KPNLPQEKER IIGCKGRVFC LDDEPGVHRV WQPDAETPGL AMSRAFGDYC IKEYGLVSVP EVTQRHISTK DHFIILASDG
301: IWDVISNQEA IEIVSSTAER PKAAKRLVEQ AVRAWKKKRR GYSMDDMSVV CLFLHSSSSS SLSQHHHAMT ILK

Arabidopsis Description

PPC6-7Probable protein phosphatase 2C 73 [Source:UniProtKB/Swiss-Prot;Acc:Q0WRB2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.