Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 2
- peroxisome 1
- mitochondrion 3
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os02t0317400-01 | |
| Os09t0251450-00 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G05640.1 | Os02t0317400-01 | AT4G08520.1 | 21798944 |
| AT3G05640.1 | Os09t0251450-00 | AT4G08520.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G228100.1 | Wheat | mitochondrion | 75.35 | 78.7 |
| EES19385 | Sorghum | mitochondrion, nucleus, peroxisome, plastid | 78.47 | 78.47 |
| TraesCS1B01G242300.1 | Wheat | mitochondrion | 74.79 | 77.88 |
| TraesCS1B01G242400.1 | Wheat | cytosol, peroxisome, plastid | 74.79 | 77.65 |
| TraesCS1B01G242200.1 | Wheat | mitochondrion | 73.94 | 76.99 |
| Zm00001d037949_P001 | Maize | mitochondrion | 75.35 | 75.35 |
| HORVU1Hr1G059090.7 | Barley | cytosol, peroxisome, plastid | 74.79 | 75.0 |
| TraesCS1D01G230000.2 | Wheat | cytosol, peroxisome, plastid | 74.79 | 71.74 |
| TraesCS1A01G228000.1 | Wheat | mitochondrion, peroxisome, plastid | 75.64 | 71.58 |
| TraesCS1D01G229700.1 | Wheat | mitochondrion | 74.22 | 71.2 |
| TraesCS1D01G229600.2 | Wheat | mitochondrion | 73.65 | 70.84 |
| HORVU1Hr1G059130.3 | Barley | mitochondrion | 75.35 | 70.56 |
| TraesCS1B01G033400.1 | Wheat | cytosol, peroxisome | 44.76 | 69.6 |
| GSMUA_Achr11P... | Banana | mitochondrion | 60.91 | 62.87 |
| GSMUA_Achr8P10330_001 | Banana | mitochondrion, nucleus | 61.47 | 62.0 |
| TraesCS1A01G228200.1 | Wheat | mitochondrion | 66.29 | 60.78 |
| CDY18810 | Canola | cytosol, nucleus, peroxisome | 57.79 | 58.62 |
| Bra040530.1-P | Field mustard | cytosol, nucleus, peroxisome | 57.79 | 58.62 |
| TraesCS7B01G361000.1 | Wheat | mitochondrion, peroxisome, plastid | 58.07 | 58.57 |
| VIT_14s0060g02070.t01 | Wine grape | mitochondrion | 59.49 | 57.38 |
| KRG96758 | Soybean | cytosol, mitochondrion, peroxisome | 59.77 | 57.18 |
| KRH68473 | Soybean | cytosol, mitochondrion, peroxisome | 60.06 | 57.14 |
| AT3G05640.1 | Thale cress | cytosol, mitochondrion, peroxisome | 57.79 | 56.98 |
| PGSC0003DMT400063747 | Potato | cytosol, mitochondrion, peroxisome | 58.36 | 56.13 |
| KRG92929 | Soybean | nucleus | 58.07 | 55.86 |
| Solyc01g100040.2.1 | Tomato | cytosol, mitochondrion, peroxisome | 58.07 | 55.86 |
| KRH33864 | Soybean | nucleus | 58.07 | 55.71 |
| CDY05554 | Canola | nucleus | 57.22 | 54.89 |
| Bra036606.1-P | Field mustard | nucleus | 57.79 | 54.69 |
| Bra020569.1-P | Field mustard | nucleus | 57.79 | 54.4 |
| CDY19742 | Canola | nucleus | 57.22 | 54.16 |
| CDY25013 | Canola | nucleus | 57.51 | 54.13 |
| CDY53338 | Canola | cytosol, mitochondrion, nucleus | 56.94 | 53.89 |
| AT5G27930.1 | Thale cress | nucleus | 56.66 | 53.62 |
| PGSC0003DMT400015950 | Potato | plastid | 52.97 | 52.23 |
| HORVU1Hr1G059140.2 | Barley | mitochondrion, plastid | 39.09 | 51.88 |
| Solyc01g065700.2.1 | Tomato | nucleus | 52.69 | 51.52 |
| AT3G16800.2 | Thale cress | nucleus | 50.71 | 51.0 |
| CDY67911 | Canola | nucleus | 49.86 | 50.14 |
| Bra021202.1-P | Field mustard | nucleus | 49.86 | 50.14 |
| CDY50503 | Canola | nucleus | 49.86 | 50.14 |
| KRH50799 | Soybean | cytosol | 50.71 | 48.77 |
| VIT_05s0077g01820.t01 | Wine grape | cytosol, mitochondrion, peroxisome, plastid | 55.24 | 48.51 |
| KRH02293 | Soybean | cytosol | 51.27 | 48.14 |
| Bra022179.1-P | Field mustard | nucleus | 47.59 | 47.86 |
| CDX95903 | Canola | nucleus | 47.31 | 47.58 |
| CDX92097 | Canola | nucleus | 47.31 | 47.58 |
| Os02t0224100-01 | Rice | cytosol, peroxisome, plastid | 42.78 | 38.82 |
| Os07t0566200-01 | Rice | plasma membrane | 43.06 | 35.6 |
| Os11t0109000-01 | Rice | cytosol, peroxisome, plastid | 39.66 | 33.33 |
| Os11t0417400-01 | Rice | plasma membrane | 38.53 | 31.48 |
| Os12t0108600-00 | Rice | cytosol, peroxisome, plastid | 39.94 | 30.99 |
| Os08t0500300-01 | Rice | plasma membrane | 44.48 | 29.57 |
| Os04t0321800-02 | Rice | peroxisome | 38.24 | 29.35 |
| Os02t0471500-01 | Rice | cytosol, mitochondrion, plasma membrane | 40.51 | 27.61 |
| Os07t0646100-00 | Rice | plasma membrane | 26.63 | 25.13 |
| Os02t0281000-01 | Rice | cytosol | 25.78 | 8.38 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:18.4.24.2.5 | Gene3D:3.60.40.10 | EntrezGene:4338531 | ProteinID:AAT38039.1 |
| ProteinID:AAV43855.1 | EMBL:AK100777 | ProteinID:BAF17217.1 | ProteinID:BAS93593.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004721 | GO:GO:0004722 | GO:GO:0005488 | GO:GO:0006464 | GO:GO:0006470 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0046872 | InterPro:IPR001932 |
| InterPro:IPR036457 | EnsemblPlantsGene:Os05g0358500 | EnsemblPlants:Os05t0358500-01 | PFAM:PF00481 | InterPro:PP2C | InterPro:PPM-type_dom_sf |
| InterPro:PPM-type_phosphatase_dom | PFscan:PS51746 | PANTHER:PTHR13832 | PANTHER:PTHR13832:SF198 | UniProt:Q6L482 | SMART:SM00332 |
| SUPFAM:SSF81606 | UniParc:UPI0000376C2E | RefSeq:XP_015639910.1 | RefSeq:XP_015639911.1 | SEG:seg | : |
Description
protein phosphatase 2C48, protein phosphatase 2C 48, protein phosphatase 75Protein phosphatase 2C domain containing protein. (Os05t0358500-01);Protein phosphatase 2C domain containing protein. (Os05t0358500-02)
Coordinates
chr5:-:17017991..17021890
Molecular Weight (calculated)
38103.3 Da
IEP (calculated)
7.383
GRAVY (calculated)
-0.176
Length
353 amino acids
Sequence
(BLAST)
(BLAST)
001: MRHISSLLQG LARSLSVGKE RKGGDGDDGK AAAATATAVL RTSGTLWGEG SETFAAVCSR RGEKGINQDC SIVCEGFGCE EGSVLCGIFD GHGQWGHYVA
101: KAVRESLPPA LLRRWREAVT LAALIDGGEK RLCECRPDLW RQSYLAACAA VDAELRASRR LDAVHSGCTA LSLVKHGDLL VVANVGDSRA VLATASPDDG
201: GGARLAAVQL TVDFKPNLPQ ERERIMECNG RVQCLADEPG VHRVWRPDRE GPGLAMSRAF GDYCVKDYGV ISAPEVTHRR ITAQDHFVIL ATDGVWDVVS
301: NEEAVQIVAS APEREKAAKR LVEFAVRAWR RKRRGIAVDD CSAICLFFHS PPS
101: KAVRESLPPA LLRRWREAVT LAALIDGGEK RLCECRPDLW RQSYLAACAA VDAELRASRR LDAVHSGCTA LSLVKHGDLL VVANVGDSRA VLATASPDDG
201: GGARLAAVQL TVDFKPNLPQ ERERIMECNG RVQCLADEPG VHRVWRPDRE GPGLAMSRAF GDYCVKDYGV ISAPEVTHRR ITAQDHFVIL ATDGVWDVVS
301: NEEAVQIVAS APEREKAAKR LVEFAVRAWR RKRRGIAVDD CSAICLFFHS PPS
001: MGHFSSMFNG LARSFSIKKV KNNNGNCDAK EAADEMASEA KKKELILKSS GYVNVQGSNN LASLFSKRGE KGVNQDCALV WEGFGCQEDM IFCGIFDGHG
101: PWGHYVAKQV RNSMPLSLLC NWQKILAQAT LEPELDLEGS NKKISRFDIW KQSYLKTCAT VDQELEHHRK IDSYYSGTTA LTIVRQGEVI YVANVGDSRA
201: VLAMESDEGS LVAVQLTLDF KPNLPQEKER IIGCKGRVFC LDDEPGVHRV WQPDAETPGL AMSRAFGDYC IKEYGLVSVP EVTQRHISTK DHFIILASDG
301: IWDVISNQEA IEIVSSTAER PKAAKRLVEQ AVRAWKKKRR GYSMDDMSVV CLFLHSSSSS SLSQHHHAMT ILK
101: PWGHYVAKQV RNSMPLSLLC NWQKILAQAT LEPELDLEGS NKKISRFDIW KQSYLKTCAT VDQELEHHRK IDSYYSGTTA LTIVRQGEVI YVANVGDSRA
201: VLAMESDEGS LVAVQLTLDF KPNLPQEKER IIGCKGRVFC LDDEPGVHRV WQPDAETPGL AMSRAFGDYC IKEYGLVSVP EVTQRHISTK DHFIILASDG
301: IWDVISNQEA IEIVSSTAER PKAAKRLVEQ AVRAWKKKRR GYSMDDMSVV CLFLHSSSSS SLSQHHHAMT ILK
Arabidopsis Description
PPC6-7Probable protein phosphatase 2C 73 [Source:UniProtKB/Swiss-Prot;Acc:Q0WRB2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.