Skip to main content
crop-pal logo
Wheat
Search for another protein from :
Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:
  • peroxisome 1
  • mitochondrion 1
  • plastid 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plastid
Any Predictor:cytosol, peroxisome, plastid
MultiLoc:peroxisome
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS5A01G168700.2
TraesCS5B01G165500.2
TraesCS5D01G173000.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G05640.1 TraesCS5A01G168700.2 AT4G08520.1 21798944
AT3G05640.1 TraesCS5B01G165500.2 AT4G08520.1 21798944
AT3G05640.1 TraesCS5D01G173000.1 AT4G08520.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU1Hr1G059090.7 Barley cytosol, peroxisome, plastid 95.59 92.33
TraesCS1D01G230000.2 Wheat cytosol, peroxisome, plastid 97.06 89.67
TraesCS1B01G033400.1 Wheat cytosol, peroxisome 57.65 86.34
TraesCS1B01G242200.1 Wheat mitochondrion 83.82 84.07
TraesCS1B01G242300.1 Wheat mitochondrion 82.94 83.19
EES19385 Sorghum mitochondrion, nucleus, peroxisome, plastid 83.24 80.17
Zm00001d037949_P001 Maize mitochondrion 80.29 77.34
Os05t0358500-01 Rice mitochondrion 77.65 74.79
TraesCS7B01G361000.1 Wheat mitochondrion, peroxisome, plastid 71.18 69.14
GSMUA_Achr11P... Banana mitochondrion 68.24 67.84
GSMUA_Achr8P10330_001 Banana mitochondrion, nucleus 65.88 64.0
VIT_14s0060g02070.t01 Wine grape mitochondrion 65.0 60.38
Bra040530.1-P Field mustard cytosol, nucleus, peroxisome 61.18 59.77
CDY18810 Canola cytosol, nucleus, peroxisome 61.18 59.77
KRG96758 Soybean cytosol, mitochondrion, peroxisome 64.71 59.62
KRH68473 Soybean cytosol, mitochondrion, peroxisome 64.71 59.3
PGSC0003DMT400063747 Potato cytosol, mitochondrion, peroxisome 63.53 58.86
AT3G05640.1 Thale cress cytosol, mitochondrion, peroxisome 61.76 58.66
Solyc01g100040.2.1 Tomato cytosol, mitochondrion, peroxisome 62.94 58.31
KRG92929 Soybean nucleus 62.65 58.04
KRH33864 Soybean nucleus 62.06 57.34
CDY05554 Canola nucleus 60.88 56.25
Bra036606.1-P Field mustard nucleus 60.88 55.5
Bra020569.1-P Field mustard nucleus 60.88 55.2
CDY19742 Canola nucleus 60.29 54.96
CDY25013 Canola nucleus 60.59 54.93
CDY53338 Canola cytosol, mitochondrion, nucleus 60.0 54.69
AT5G27930.1 Thale cress nucleus 59.41 54.16
AT3G16800.2 Thale cress nucleus 55.0 53.28
CDY67911 Canola nucleus 54.71 52.99
CDY50503 Canola nucleus 54.71 52.99
Bra021202.1-P Field mustard nucleus 54.71 52.99
KRH50799 Soybean cytosol 57.06 52.86
PGSC0003DMT400015950 Potato plastid 55.59 52.79
Solyc01g065700.2.1 Tomato nucleus 55.59 52.35
KRH02293 Soybean cytosol 57.35 51.86
Bra022179.1-P Field mustard nucleus 53.24 51.57
CDX92097 Canola nucleus 52.94 51.28
CDX95903 Canola nucleus 52.94 51.28
VIT_05s0077g01820.t01 Wine grape cytosol, mitochondrion, peroxisome, plastid 59.71 50.5
TraesCS6B01G216900.1 Wheat nucleus, peroxisome, plastid 43.53 41.46
TraesCS2B01G229000.1 Wheat cytosol, peroxisome, plastid 43.24 34.11
TraesCS5B01G149300.1 Wheat cytosol 42.65 33.96
TraesCS4B01G162100.1 Wheat cytosol, mitochondrion, peroxisome 42.94 33.33
TraesCS7B01G137400.2 Wheat plastid 49.12 29.04
TraesCS6B01G229600.1 Wheat mitochondrion 42.06 27.61
TraesCS2B01G291800.1 Wheat mitochondrion 41.76 26.84
TraesCS2B01G166100.3 Wheat cytosol 27.06 19.7
TraesCS6B01G231400.1 Wheat plastid 27.06 8.47
Protein Annotations
KEGG:04658+3.1.3.16KEGG:04660+3.1.3.16MapMan:18.4.24.2.5Gene3D:3.60.40.10GO:GO:0003674GO:GO:0003824
GO:GO:0004722GO:GO:0006464GO:GO:0006470GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016787GO:GO:0019538InterPro:IPR001932InterPro:IPR036457PFAM:PF00481InterPro:PP2C
InterPro:PPM-type_dom_sfInterPro:PPM-type_phosphatase_domPFscan:PS51746PANTHER:PTHR13832PANTHER:PTHR13832:SF198SMART:SM00332
SUPFAM:SSF81606EnsemblPlantsGene:TraesCS1B01G242400EnsemblPlants:TraesCS1B01G242400.1TIGR:cd00143::
Description
No Description!
Coordinates
chr1B:-:429976482..429978909
Molecular Weight (calculated)
37342.2 Da
IEP (calculated)
6.176
GRAVY (calculated)
-0.281
Length
340 amino acids
Sequence
(BLAST)
001: MRQISSMLQG LARSMSLGKE RKEAEEPQGT VLRSSGTLWG EGSETFAAVC SRRGEKGTNQ DTSIVWEGYG CQDDTIFCGV FDGHGQWGHY VAKAVRESLP
101: QSLLCHWQEA VALTSLIDGE KRLSDCQFDL LKQSYLAAAA AVDEELRRSR RLDAVNSGCT ALSIVKQGDL MVVANVGDSR AVLATTSDDG DVTAVQLTVD
201: FKPDLPQEKA RITQCQGRVH CLDDEPGVHR VWVPHREAPG LAMSRAFGDY CVKDYGVISA PEVTQRRITA RDQFVILATD GVWDVLSNEE AVRIVAATPD
301: REKAAKRLVE CAVRGWRRKR RGIAVDDCSA VCLFFHTPAP
Best Arabidopsis Sequence Match ( AT3G05640.3 )
(BLAST)
001: MGHFSSMFNG IARSFSIKKA KNINSSKSYA KEATDEMARE AKKKELILRS SGCINADGSN NLASVFSRRG EKGVNQDCAI VWEGYGCQED MIFCGIFDGH
101: GPWGHFVSKQ VRNSMPISLL CNWKETLSQT TIAEPDKELQ RFAIWKYSFL KTCEAVDLEL EHHRKIDSFN SGTTALTIVR QGDVIYIANV GDSRAVLATV
201: SDEGSLVAVQ LTVDFKPNLP QEEERIIGCN GRVFCLQDEP GVHRVWQPVD ESPGLAMSRA FGDYCIKDYG LVSVPEVTQR HISIRDQFII LATDGVWDVI
301: SNQEAIDIVS STAERAKAAK RLVQQAVRAW NRKRRGIAMD DISAVCLFFH SSSSSPSL
Arabidopsis Description
Probable protein phosphatase 2C 34 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9W9]
SUBAcon: [mitochondrion,peroxisome,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.