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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • mitochondrion 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:mitochondrion, nucleus, plastid
BaCelLo:nucleus
MultiLoc:nucleus
Plant-mPloc:nucleus
Predotar:plastid
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY50503 Canola nucleus 91.45 91.45
CDY67911 Canola nucleus 91.17 91.17
Bra021202.1-P Field mustard nucleus 90.88 90.88
Bra022179.1-P Field mustard nucleus 90.03 90.03
CDX95903 Canola nucleus 89.74 89.74
CDX92097 Canola nucleus 88.89 88.89
GSMUA_Achr11P... Banana mitochondrion 57.83 59.36
GSMUA_Achr8P10330_001 Banana mitochondrion, nucleus 56.98 57.14
KRH50799 Soybean cytosol 57.83 55.31
TraesCS1B01G242400.1 Wheat cytosol, peroxisome, plastid 53.28 55.0
AT3G05640.1 Thale cress cytosol, mitochondrion, peroxisome 55.27 54.19
Solyc01g065700.2.1 Tomato nucleus 55.27 53.74
PGSC0003DMT400015950 Potato plastid 54.7 53.63
EES19385 Sorghum mitochondrion, nucleus, peroxisome, plastid 53.85 53.54
KRH02293 Soybean cytosol 57.27 53.46
TraesCS1A01G228100.1 Wheat mitochondrion 51.0 52.96
HORVU1Hr1G059090.7 Barley cytosol, peroxisome, plastid 52.71 52.56
TraesCS1B01G242300.1 Wheat mitochondrion 50.71 52.51
AT5G27930.1 Thale cress nucleus 55.27 52.01
TraesCS1B01G033400.1 Wheat cytosol, peroxisome 33.62 51.98
Zm00001d037949_P001 Maize mitochondrion 52.14 51.84
TraesCS1B01G242200.1 Wheat mitochondrion 49.86 51.62
Os05t0358500-01 Rice mitochondrion 51.0 50.71
VIT_05s0077g01820.t01 Wine grape cytosol, mitochondrion, peroxisome, plastid 57.83 50.5
TraesCS1D01G230000.2 Wheat cytosol, peroxisome, plastid 52.42 50.0
TraesCS1D01G229700.1 Wheat mitochondrion 51.28 48.91
TraesCS1D01G229600.2 Wheat mitochondrion 50.43 48.23
TraesCS1A01G228000.1 Wheat mitochondrion, peroxisome, plastid 51.0 47.99
HORVU1Hr1G059130.3 Barley mitochondrion 51.28 47.75
TraesCS1A01G228200.1 Wheat mitochondrion 46.15 42.08
HORVU1Hr1G059140.2 Barley mitochondrion, plastid 28.77 37.97
AT5G26010.1 Thale cress cytosol, nucleus, peroxisome 35.33 37.46
TraesCS7B01G361000.1 Wheat mitochondrion, peroxisome, plastid 36.75 36.86
AT4G32950.1 Thale cress cytosol 33.33 35.89
AT5G01700.2 Thale cress cytosol, peroxisome, plastid 37.89 34.82
AT5G36250.2 Thale cress plastid 41.6 31.6
AT1G03590.1 Thale cress cytosol, nucleus, peroxisome, plastid 39.03 29.65
AT4G03415.2 Thale cress plastid 38.46 28.85
AT1G79630.1 Thale cress nucleus 41.31 28.77
AT1G16220.1 Thale cress nucleus 39.03 27.9
AT3G02750.3 Thale cress plastid 41.6 27.7
AT3G06270.1 Thale cress cytosol 23.08 23.28
AT2G20050.1 Thale cress cytosol 26.78 8.59
Protein Annotations
KEGG:04658+3.1.3.16KEGG:04660+3.1.3.16MapMan:18.4.24.2.5Gene3D:3.60.40.10EntrezGene:820933ProteinID:AEE75866.1
ProteinID:AEE75867.1ProteinID:AEE75868.2EMBL:AK317121ProteinID:ANM64938.1ProteinID:ANM64939.1ArrayExpress:AT3G16800
EnsemblPlantsGene:AT3G16800RefSeq:AT3G16800TAIR:AT3G16800RefSeq:AT3G16800-TAIR-GEnsemblPlants:AT3G16800.2TAIR:AT3G16800.2
EMBL:AY088376EMBL:AY099831ProteinID:BAA95773.1EMBL:BT000321UniProt:F4J3W4GO:GO:0000226
GO:GO:0003674GO:GO:0003824GO:GO:0004721GO:GO:0004722GO:GO:0005488GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005737GO:GO:0006464GO:GO:0006470
GO:GO:0006950GO:GO:0008150GO:GO:0008152GO:GO:0009628GO:GO:0009819GO:GO:0009987
GO:GO:0016043GO:GO:0016787GO:GO:0019538GO:GO:0040007GO:GO:0045926GO:GO:0046872
InterPro:IPR001932InterPro:IPR036457RefSeq:NP_001319572.1RefSeq:NP_001326939.1RefSeq:NP_001326940.1RefSeq:NP_188303.1
RefSeq:NP_850599.2ProteinID:OAP06964.1PFAM:PF00481PO:PO:0000013PO:PO:0000230PO:PO:0000263
PO:PO:0000293PO:PO:0001054PO:PO:0007095PO:PO:0007115PO:PO:0007123PO:PO:0007611
PO:PO:0007616PO:PO:0009005PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009032
PO:PO:0009046PO:PO:0009047PO:PO:0020137PO:PO:0025022PO:PO:0025281InterPro:PP2C
InterPro:PPM-type_dom_sfInterPro:PPM-type_phosphatase_domPFscan:PS51746PANTHER:PTHR13832PANTHER:PTHR13832:SF310UniProt:Q9LRZ4
SMART:SM00332SUPFAM:SSF81606UniParc:UPI0000048726SEG:seg::
Description
Probable protein phosphatase 2C 41 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRZ4]
Coordinates
chr3:+:5720941..5723185
Molecular Weight (calculated)
38603.2 Da
IEP (calculated)
7.832
GRAVY (calculated)
-0.225
Length
351 amino acids
Sequence
(BLAST)
001: MVLLPAFLDG LARTVSTKKG KKLSEDEDGG REIAKSMIKD SKKNSTLLGT SGFVSSESSK RFTSICSNRG EKGINQDRAI VWEGFGCQED ITFCGMFDGH
101: GPWGHVIAKR VKKSFPSSLL CQWQQTLASL SSSPECSSPF DLWKQACLKT FSIIDLDLKI SPSIDSYCSG CTALTAVLQG DHLVIANAGD SRAVIATTSD
201: DGNGLVPVQL SVDFKPNIPE EAERIKQSDG RLFCLDDEPG VYRVGMPNGG SLGLAVSRAF GDYCLKDFGL VSEPEVTYRK ITDKDQFLIL ATDGMWDVMT
301: NNEAVEIVRG VKERRKSAKR LVERAVTLWR RKRRSIAMDD ISVLCLFFRP S
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.