Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY48559 | Canola | plastid | 87.18 | 92.73 |
| Bra034206.1-P | Field mustard | plastid | 92.09 | 92.69 |
| CDY21964 | Canola | plastid | 86.54 | 92.26 |
| AT1G03590.1 | Thale cress | cytosol, nucleus, peroxisome, plastid | 76.92 | 77.92 |
| VIT_12s0059g01820.t01 | Wine grape | plastid | 75.64 | 74.84 |
| KRH56012 | Soybean | nucleus | 74.79 | 74.31 |
| KRH25524 | Soybean | nucleus | 74.57 | 74.1 |
| PGSC0003DMT400047180 | Potato | plastid | 74.15 | 73.52 |
| Solyc07g054300.2.1 | Tomato | plastid | 73.29 | 72.67 |
| KRH26917 | Soybean | cytosol, plastid | 73.5 | 72.57 |
| KRH22416 | Soybean | nucleus, plastid | 73.5 | 72.42 |
| Solyc10g008490.2.1 | Tomato | plastid | 69.66 | 69.51 |
| PGSC0003DMT400055813 | Potato | plastid | 69.66 | 69.36 |
| EER99559 | Sorghum | plastid | 53.85 | 58.47 |
| Os07t0566200-01 | Rice | plasma membrane | 52.99 | 58.08 |
| Zm00001d006614_P001 | Maize | plastid | 53.42 | 57.87 |
| TraesCS2D01G214200.1 | Wheat | cytosol, peroxisome, plastid | 52.99 | 57.54 |
| TraesCS2B01G229000.1 | Wheat | cytosol, peroxisome, plastid | 52.78 | 57.31 |
| HORVU2Hr1G039710.1 | Barley | cytosol, peroxisome, plastid | 52.78 | 57.31 |
| Zm00001d021817_P001 | Maize | plastid | 52.78 | 57.31 |
| TraesCS2A01G201900.1 | Wheat | cytosol, peroxisome, plastid | 52.35 | 57.24 |
| GSMUA_Achr9P24510_001 | Banana | plastid | 51.28 | 57.14 |
| HORVU2Hr1G084080.1 | Barley | cytosol, plastid | 18.16 | 54.49 |
| AT1G79630.1 | Thale cress | nucleus | 46.15 | 42.86 |
| AT1G16220.1 | Thale cress | nucleus | 44.44 | 42.36 |
| AT5G36250.2 | Thale cress | plastid | 41.45 | 41.99 |
| AT3G05640.1 | Thale cress | cytosol, mitochondrion, peroxisome | 32.05 | 41.9 |
| AT5G01700.2 | Thale cress | cytosol, peroxisome, plastid | 33.97 | 41.62 |
| AT3G02750.3 | Thale cress | plastid | 46.37 | 41.18 |
| AT5G26010.1 | Thale cress | cytosol, nucleus, peroxisome | 28.85 | 40.79 |
| AT4G32950.1 | Thale cress | cytosol | 27.35 | 39.26 |
| AT5G27930.1 | Thale cress | nucleus | 30.98 | 38.87 |
| AT3G16800.2 | Thale cress | nucleus | 28.85 | 38.46 |
| AT3G06270.1 | Thale cress | cytosol | 18.59 | 25.0 |
| AT2G20050.1 | Thale cress | cytosol | 26.5 | 11.33 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:18.4.24.2.5 | Gene3D:3.60.40.10 | EntrezGene:827930 | UniProt:A0A178UVG7 |
| ProteinID:ADM21187.1 | ProteinID:AEE82317.1 | ProteinID:AEE82318.1 | EMBL:AF071527 | EMBL:AK117847 | ProteinID:ANM68033.1 |
| ArrayExpress:AT4G03415 | EnsemblPlantsGene:AT4G03415 | RefSeq:AT4G03415 | TAIR:AT4G03415 | RefSeq:AT4G03415-TAIR-G | EnsemblPlants:AT4G03415.2 |
| TAIR:AT4G03415.2 | EMBL:BT005384 | UniProt:E0Y434 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004721 |
| GO:GO:0004722 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006464 |
| GO:GO:0006470 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016787 |
| GO:GO:0019538 | GO:GO:0046872 | InterPro:IPR001932 | InterPro:IPR036457 | RefSeq:NP_001190668.1 | RefSeq:NP_001329815.1 |
| RefSeq:NP_680572.4 | ProteinID:OAO96852.1 | PFAM:PF00481 | PO:PO:0000293 | InterPro:PP2C | InterPro:PPM-type_dom_sf |
| InterPro:PPM-type_phosphatase_dom | PFscan:PS51746 | PANTHER:PTHR13832 | PANTHER:PTHR13832:SF193 | UniProt:Q8GY60 | SMART:SM00332 |
| SUPFAM:SSF81606 | UniParc:UPI000000C628 | SEG:seg | : | : | : |
Description
PP2C52 [Source:UniProtKB/TrEMBL;Acc:A0A178UVG7]
Coordinates
chr4:-:1503573..1506460
Molecular Weight (calculated)
51853.8 Da
IEP (calculated)
5.841
GRAVY (calculated)
-0.504
Length
468 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGCVSTSSK STCSSWSNGE KPVRRPYLGI GCCVSKRAKR TFSDHIVSLQ NLTSIPNRIT SSSKSRSSCI FTQQGRKGIN QDAMIVWEDF MSEDVTFCGV
101: FDGHGPYGHL VARKVRDTLP VKLQFFFQTL QSKQNCSKGT RFRRNSSKSA VQEAVKEGSD EDKLKGLWGE AFLKSFKAMD KELRSHPNLD CFCSGSTGVT
201: ILKQGSNLFM GNIGDSRAIL GSKDSNDSMV ATQLTVDLKP DLPREAERIK RCKGRVFAME DEPEVPRVWL PYDDAPGLAM ARAFGDFCLK EYGVISVPEF
301: THRVLTDRDQ FIVLASDGVW DVLSNEEVVD IVASATSRAS AARTLVNSAA REWKLKYPTS KMDDCAVVCL FLDGKMDSES DYDEQGFSSA TNAVESDDGQ
401: RSEPCLQRNF TVRSSSDQEN ETYGNVNTET DAEDEKTVGD QNWLGLQGVT RVNSLVQLPR FSEEKSKT
101: FDGHGPYGHL VARKVRDTLP VKLQFFFQTL QSKQNCSKGT RFRRNSSKSA VQEAVKEGSD EDKLKGLWGE AFLKSFKAMD KELRSHPNLD CFCSGSTGVT
201: ILKQGSNLFM GNIGDSRAIL GSKDSNDSMV ATQLTVDLKP DLPREAERIK RCKGRVFAME DEPEVPRVWL PYDDAPGLAM ARAFGDFCLK EYGVISVPEF
301: THRVLTDRDQ FIVLASDGVW DVLSNEEVVD IVASATSRAS AARTLVNSAA REWKLKYPTS KMDDCAVVCL FLDGKMDSES DYDEQGFSSA TNAVESDDGQ
401: RSEPCLQRNF TVRSSSDQEN ETYGNVNTET DAEDEKTVGD QNWLGLQGVT RVNSLVQLPR FSEEKSKT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.