Factsheet for Solyc07g054300.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 4
plastid 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	plastid
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400047180	Potato	plastid	98.09	98.09
Solyc10g008490.2.1	Tomato	plastid	82.63	83.16
VIT_12s0059g01820.t01	Wine grape	plastid	82.42	82.24
KRH56012	Soybean	nucleus	78.39	78.56
KRH25524	Soybean	nucleus	78.18	78.34
KRH26917	Soybean	cytosol, plastid	75.64	75.32
CDY48559	Canola	plastid	69.92	75.0
CDY21964	Canola	plastid	69.7	74.94
KRH22416	Soybean	nucleus, plastid	75.0	74.53
AT4G03415.2	Thale cress	plastid	72.67	73.29
Bra034206.1-P	Field mustard	plastid	72.03	73.12
CDX89881	Canola	plastid	65.04	72.24
CDY69821	Canola	plastid	59.53	71.5
Bra033411.1-P	Field mustard	mitochondrion	63.98	71.39
AT1G03590.1	Thale cress	cytosol, nucleus, peroxisome, plastid	69.49	71.0
CDY15466	Canola	cytosol, peroxisome, plastid	62.5	69.58
CDY51389	Canola	cytosol, peroxisome, plastid	61.86	69.03
Bra030536.1-P	Field mustard	cytosol, peroxisome, plastid	64.62	68.23
EER99559	Sorghum	plastid	55.93	61.25
Os07t0566200-01	Rice	plasma membrane	55.3	61.12
Zm00001d006614_P001	Maize	plastid	55.51	60.65
Zm00001d021817_P001	Maize	plastid	54.87	60.09
TraesCS2D01G214200.1	Wheat	cytosol, peroxisome, plastid	54.66	59.86
TraesCS2A01G201900.1	Wheat	cytosol, peroxisome, plastid	54.24	59.81
HORVU2Hr1G039710.1	Barley	cytosol, peroxisome, plastid	54.45	59.63
TraesCS2B01G229000.1	Wheat	cytosol, peroxisome, plastid	54.45	59.63
GSMUA_Achr9P24510_001	Banana	plastid	52.75	59.29
HORVU2Hr1G084080.1	Barley	cytosol, plastid	18.22	55.13
Solyc04g056560.2.1	Tomato	cytosol	42.16	49.63
Solyc05g055790.2.1	Tomato	plastid	45.34	45.53
Solyc08g065670.2.1	Tomato	peroxisome	28.81	44.44
Solyc08g065500.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	29.87	41.96
Solyc07g066260.2.1	Tomato	cytosol, nucleus, peroxisome	45.76	41.94
Solyc10g076320.1.1	Tomato	nucleus	37.71	40.83
Solyc08g065540.2.1	Tomato	cytosol, nucleus, peroxisome	28.39	40.36
Solyc01g100040.2.1	Tomato	cytosol, mitochondrion, peroxisome	31.36	40.33
Solyc10g085370.1.1	Tomato	cytosol, nucleus, peroxisome	38.56	40.18
Solyc10g005640.2.1	Tomato	nucleus	45.55	38.67
Solyc01g065700.2.1	Tomato	nucleus	29.24	38.23
Solyc08g065680.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	15.89	36.59
Solyc01g080400.2.1	Tomato	cytosol	20.97	23.91
Solyc05g018300.2.1	Tomato	cytosol	24.58	10.74

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.5	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932	InterPro:IPR036457	UniProt:K4CFX5	PFAM:PF00481
InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF193
SMART:SM00332	SUPFAM:SSF81606	EnsemblPlantsGene:Solyc07g054300.2	EnsemblPlants:Solyc07g054300.2.1	UniParc:UPI000276C405	SEG:seg

Description

No Description!

Coordinates

chr7:+:62655049..62658841

Molecular Weight (calculated)

52408.6 Da

IEP (calculated)

5.274

GRAVY (calculated)

-0.464

Length

472 amino acids

Sequence
(BLAST)

001: MGGCASTSNH STCSSRSNGE RVSPECLGIS MFSRKRIRKT FSDPVTTLQH LTSIPNRIFK NGKSRTSCIF TQQGRKGINQ DAMVVWEDFM AEDVTFCGVF
101: DGHGPHGHLV ARKVRDALPL KLASFLQSFD SKHNGSTANC CSGDKKLDVV DPDKDGGMED KVDYLWREAF LKSYKAMDKE LRSHPNLDCF CSGSTAITLV
201: KQGSNLFMGY IGDSRAIMAS KDSNDSMVAV QLTVDLKPDL PKEAERIKRC KGRVFALQDE PEVQRVWLPF DDAPGLAMAR AFGDFCLKEY GVISVPEFSH
301: HILTERDKFI VLASDGVWDV LSNEEVIEIV SSAPTRASAA RILVDSAARE WKTKYPTSKM DDCAVVCLFL DGKMDSESDN EDQCFSSATL QSNHSGNAVE
401: SDDGQNSEPS LQRNFTVRSA EENDTYKRIV AEVEANQEAM STEEQNWLGL EGVTRVNSLV QLPRFSEERP RP

Best Arabidopsis Sequence Match ( AT4G03415.2 )
(BLAST)

001: MGGCVSTSSK STCSSWSNGE KPVRRPYLGI GCCVSKRAKR TFSDHIVSLQ NLTSIPNRIT SSSKSRSSCI FTQQGRKGIN QDAMIVWEDF MSEDVTFCGV
101: FDGHGPYGHL VARKVRDTLP VKLQFFFQTL QSKQNCSKGT RFRRNSSKSA VQEAVKEGSD EDKLKGLWGE AFLKSFKAMD KELRSHPNLD CFCSGSTGVT
201: ILKQGSNLFM GNIGDSRAIL GSKDSNDSMV ATQLTVDLKP DLPREAERIK RCKGRVFAME DEPEVPRVWL PYDDAPGLAM ARAFGDFCLK EYGVISVPEF
301: THRVLTDRDQ FIVLASDGVW DVLSNEEVVD IVASATSRAS AARTLVNSAA REWKLKYPTS KMDDCAVVCL FLDGKMDSES DYDEQGFSSA TNAVESDDGQ
401: RSEPCLQRNF TVRSSSDQEN ETYGNVNTET DAEDEKTVGD QNWLGLQGVT RVNSLVQLPR FSEEKSKT

Arabidopsis Description

PP2C52 [Source:UniProtKB/TrEMBL;Acc:A0A178UVG7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.